Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G018300 Miscanthus sinensis HOM05M000221 ORTHO05M017147 1.6e-68 261.9 142 100.0
V3.Lp_chr4_0G23714 Lolium perenne HOM05M000221 ORTHO05M001760 7.5e-21 103.6 55 96.4
TraesCS4A03G0151700 Triticum aestivum HOM05M000221 ORTHO05M001760 7.5e-21 103.6 72 79.2
TRIDC4AG009950 Triticum dicoccoides HOM05M000221 ORTHO05M001760 7.5e-21 103.6 72 79.2
Sobic.001G443200 Sorghum bicolor HOM05M000221 ORTHO05M001760 9.8e-21 103.2 72 80.6
AET4Gv20583600 Aegilops tauschii HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Bradi1g68750 Brachypodium distachyon HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
EJB05_07411 Eragrostis curvula HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Horvu_MOREX_4H01G364000 Hordeum vulgare HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Misin01G421800 Miscanthus sinensis HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Misin02G419500 Miscanthus sinensis HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Ot_Chr4_g23182 Oropetium thomaeum HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
GWHGAZTO001397 Oryza alta HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
GWHGAZTO022988 Oryza alta HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
OB03G19950 Oryza brachyantha HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
OsKitaake03g103100 Oryza sativa Kitaake HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
OsR498G0305534100.01 Oryza sativa ssp. indica HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Os03g0237000 Oryza sativa ssp. japonica HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Pahal.9G539000 Panicum hallii HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
PH02Gene19116 Phyllostachys edulis HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
PH02Gene23448 Phyllostachys edulis HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Sspon.01G0036750-2C Saccharum spontaneum HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
GWHGASIY038302 Secale cereale HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Seita.9G476200 Setaria italica HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Sevir.9G480000 Setaria viridis HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
TraesCS4D03G0559900 Triticum aestivum HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
TRIDC4BG040740 Triticum dicoccoides HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
TRITD4Bv1G140100 Triticum turgidum HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Zm00001eb010030 Zea mays B73 HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 80.6
Zm00001eb399190 Zea mays B73 HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Zm00007a00000139 Zea mays B104 HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 79.2
Zm00007a00030407 Zea mays B104 HOM05M000221 ORTHO05M001760 1.3e-20 102.8 72 80.6
CDE11G0379 Ceratophyllum demersum HOM05M000221 ORTHO05M001760 1.7e-20 102.4 55 94.5
GWHGAORA055219 Cenchrus purpureus HOM05M000221 ORTHO05M001760 3.7e-20 101.3 72 77.8
Dexi9A01G0041830 Digitaria exilis HOM05M000221 ORTHO05M001760 3.7e-20 101.3 72 77.8
Dexi9B01G0040980 Digitaria exilis HOM05M000221 ORTHO05M001760 3.7e-20 101.3 72 77.8
GWHGAZTO007281 Oryza alta HOM05M000221 ORTHO05M001760 3.7e-20 101.3 55 92.7
GWHGAZTO059635 Oryza alta HOM05M000221 ORTHO05M001760 3.7e-20 101.3 55 92.7
OsKitaake10g005900 Oryza sativa Kitaake HOM05M000221 ORTHO05M001760 3.7e-20 101.3 55 92.7
OsR498G1018037200.01 Oryza sativa ssp. indica HOM05M000221 ORTHO05M001760 3.7e-20 101.3 55 92.7
Os10g0112600 Oryza sativa ssp. japonica HOM05M000221 ORTHO05M001760 3.7e-20 101.3 55 92.7
Spipo4G0003700 Spirodela polyrhiza HOM05M000221 ORTHO05M001760 4.9e-20 100.9 55 92.7
Sspon.01G0036750-1B Saccharum spontaneum HOM05M000221 ORTHO05M001760 6.4e-20 100.5 72 77.8
Sspon.01G0036750-1P Saccharum spontaneum HOM05M000221 ORTHO05M001760 6.4e-20 100.5 72 77.8
Sspon.01G0036750-3D Saccharum spontaneum HOM05M000221 ORTHO05M001760 6.4e-20 100.5 72 77.8
Spipo15G0041400 Spirodela polyrhiza HOM05M000221 ORTHO05M001760 6.4e-20 100.5 55 94.5
GWHGAORA026867 Cenchrus purpureus HOM05M005274 ORTHO05M006524 8.3e-20 100.1 71 77.5
OB10G10560 Oryza brachyantha HOM05M000221 ORTHO05M001760 8.3e-20 100.1 55 90.9
MBI04_g36027_MAGBIO Magnolia biondii HOM05M000221 ORTHO05M001760 1.1e-19 99.8 55 92.7
HPP92_005762 Vanilla planifolia HOM05M000221 ORTHO05M001760 1.1e-19 99.8 72 77.8
Zosma01g30470 Zostera marina HOM05M000221 ORTHO05M001760 1.1e-19 99.8 72 79.2
Glyma.09G169400 Glycine max HOM05M000221 ORTHO05M001760 1.8e-19 99.0 55 92.7
Ma02_g08670 Musa acuminata HOM05M000221 ORTHO05M001760 1.8e-19 99.0 55 92.7
Ma05_g19780 Musa acuminata HOM05M000221 ORTHO05M001760 1.8e-19 99.0 55 92.7
Ma09_g29650 Musa acuminata HOM05M000221 ORTHO05M001760 1.8e-19 99.0 55 92.7
ATR0829G102 Amborella trichopoda HOM05M000221 ORTHO05M001760 2.4e-19 98.6 71 77.5
Ma06_g12900 Musa acuminata HOM05M000221 ORTHO05M001760 2.4e-19 98.6 55 90.9
Glyma.05G136800 Glycine max HOM05M000221 ORTHO05M001760 3.2e-19 98.2 55 92.7
Glyma.08G092100 Glycine max HOM05M000221 ORTHO05M001760 3.2e-19 98.2 55 92.7
AT1G14670 Arabidopsis thaliana HOM05M000221 ORTHO05M001760 4.1e-19 97.8 55 90.9
CALSI_Maker00025062 Calamus simplicifolius HOM05M000221 ORTHO05M001760 4.1e-19 97.8 55 90.9
MBI13_g21672_MAGBIO Magnolia biondii HOM05M000221 ORTHO05M001760 4.1e-19 97.8 55 92.7
SEGI_09305 Sequoiadendron giganteum HOM05M000221 ORTHO05M001760 4.1e-19 97.8 55 90.9
ATR0598G104 Amborella trichopoda HOM05M000221 ORTHO05M001760 5.4e-19 97.4 71 77.5
DDU049G0231 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 90.9
DDU354G0011 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 90.9
Glyma.16G219000 Glycine max HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 90.9
Misin07G162300 Miscanthus sinensis HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Misin13G034000 Miscanthus sinensis HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
GWHGAZTO046818 Oryza alta HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
GWHGAZTO093657 Oryza alta HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
OB08G13980 Oryza brachyantha HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
OsKitaake08g040900 Oryza sativa Kitaake HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
OsR498G0815249100.01 Oryza sativa ssp. indica HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
PH02Gene29423 Phyllostachys edulis HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
PH02Gene29424 Phyllostachys edulis HOM05M000830 ORTHO05M001760 5.4e-19 97.4 55 89.1
Sspon.06G0010750-1P Saccharum spontaneum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Sspon.06G0010750-2B Saccharum spontaneum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Sspon.06G0013770-1A Saccharum spontaneum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Sspon.06G0013770-1P Saccharum spontaneum HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Sobic.007G051400 Sorghum bicolor HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Spipo11G0012900 Spirodela polyrhiza HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 89.1
Zosma06g11650 Zostera marina HOM05M000221 ORTHO05M001760 5.4e-19 97.4 55 90.9
Aco022677 Ananas comosus HOM05M000221 ORTHO05M001760 7.0e-19 97.1 55 90.9
Zm00001eb415580 Zea mays B73 HOM05M000221 ORTHO05M001760 7.0e-19 97.1 55 89.1
Zm00007a00001386 Zea mays B104 HOM05M000221 ORTHO05M001760 7.0e-19 97.1 55 89.1
CALSI_Maker00031939 Calamus simplicifolius HOM05M000221 ORTHO05M001760 1.2e-18 96.3 55 89.1
Ma04_g16830 Musa acuminata HOM05M000221 ORTHO05M001760 1.2e-18 96.3 55 89.1
Ma07_g04850 Musa acuminata HOM05M000221 ORTHO05M001760 1.2e-18 96.3 55 89.1
AT2G01970 Arabidopsis thaliana HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 92.7
GWHGAORA013041 Cenchrus purpureus HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
GWHGAORA035925 Cenchrus purpureus HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Dexi6A01G0004990 Digitaria exilis HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Dexi6B01G0004630 Digitaria exilis HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Pahal.6G042700 Panicum hallii HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Seita.6G051700 Setaria italica HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Sevir.6G049100 Setaria viridis HOM05M000221 ORTHO05M001760 1.6e-18 95.9 55 87.3
Aco013183 Ananas comosus HOM05M000221 ORTHO05M001760 2.7e-18 95.1 55 87.3
Aco020653 Ananas comosus HOM05M000221 ORTHO05M001760 2.7e-18 95.1 55 87.3
CALSI_Maker00038284 Calamus simplicifolius HOM05M000221 ORTHO05M001760 2.7e-18 95.1 55 89.1
GWHGAORA013018 Cenchrus purpureus HOM05M000221 ORTHO05M001760 2.7e-18 95.1 55 87.3
PH02Gene02585 Phyllostachys edulis HOM05M000221 ORTHO05M001760 2.7e-18 95.1 55 87.3
HPP92_009022 Vanilla planifolia HOM05M000221 ORTHO05M001760 3.5e-18 94.7 61 78.7
Asa6G06803 Allium sativum HOM05M000221 ORTHO05M001760 5.9e-18 94.0 55 87.3
CALSI_Maker00013020 Calamus simplicifolius HOM05M000029 ORTHO05M001125 5.9e-18 94.0 55 87.3
AET7Gv20743000 Aegilops tauschii HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
Asa0G05193 Allium sativum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 89.1
Asa3G04027 Allium sativum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 89.1
Bradi3g16260 Brachypodium distachyon HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
CALSI_Maker00042117 Calamus simplicifolius HOM05M001712 ORTHO05M001726 7.8e-18 93.6 55 87.3
DDU681G0137 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 89.1
EJB05_09357 Eragrostis curvula HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
Horvu_MOREX_7H01G386300 Hordeum vulgare HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
V3.Lp_chr7_0.1G6850 Lolium perenne HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
Ma10_g17790 Musa acuminata HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 89.1
Ot_Chr9_gn39573 Oropetium thomaeum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
GWHGASIY039394 Secale cereale HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TraesCS7A03G0725800 Triticum aestivum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TraesCS7B03G0543100 Triticum aestivum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TraesCS7D03G0697900 Triticum aestivum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TRIDC7AG041050 Triticum dicoccoides HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TRIDC7BG031100 Triticum dicoccoides HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TRITD7Av1G146290 Triticum turgidum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
TRITD7Bv1G106860 Triticum turgidum HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
Zjn_sc00063.1.g01430.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000221 ORTHO05M001760 7.8e-18 93.6 55 87.3
CDE04G2276 Ceratophyllum demersum HOM05M000221 ORTHO05M001760 1.0e-17 93.2 71 74.6
Potri.017G144241 Populus trichocarpa HOM05M000221 ORTHO05M001760 1.0e-17 93.2 55 89.1
DDU002G0569 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 1.7e-17 92.4 55 89.1
DDU734G0005 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 1.7e-17 92.4 55 89.1
Zosma06g20160 Zostera marina HOM05M000221 ORTHO05M001760 1.7e-17 92.4 72 75.0
Ma01_g01530 Musa acuminata HOM05M000221 ORTHO05M001760 2.3e-17 92.0 55 87.3
Potri.012G042300 Populus trichocarpa HOM05M000221 ORTHO05M001760 3.0e-17 91.7 55 83.6
Potri.017G144181 Populus trichocarpa HOM05M000221 ORTHO05M001760 3.0e-17 91.7 55 87.3
Asa2G05360 Allium sativum HOM05M000221 ORTHO05M001760 5.0e-17 90.9 55 87.3
Solyc04g014570.3 Solanum lycopersicum HOM05M000221 ORTHO05M001760 5.0e-17 90.9 55 85.5
HPP92_009507 Vanilla planifolia HOM05M000221 ORTHO05M001760 6.6e-17 90.5 55 85.5
Ma01_g00020 Musa acuminata HOM05M000221 ORTHO05M001760 1.1e-16 89.7 55 85.5
Solyc05g054040.4 Solanum lycopersicum HOM05M000221 ORTHO05M001760 1.9e-16 89.0 55 81.8
AagrBONN_evm.TU.Sc2ySwM_368.1026 Anthoceros agrestis HOM05M000221 ORTHO05M001760 2.5e-16 88.6 55 80.0
Spipo11G0012800 Spirodela polyrhiza HOM05M000221 ORTHO05M001760 2.5e-16 88.6 55 81.8
Pp3c12_1640 Physcomitrium patens HOM05M000221 ORTHO05M001760 1.2e-15 86.3 55 80.0
Spipo11G0012700 Spirodela polyrhiza HOM05M000221 ORTHO05M001760 1.2e-15 86.3 55 78.2
SEGI_08500 Sequoiadendron giganteum HOM05M000221 ORTHO05M001760 1.6e-15 85.9 57 75.4
CBR_g52565 Chara braunii HOM05M000221 ORTHO05M001760 2.1e-15 85.5 55 76.4
Solyc11g011910.2 Solanum lycopersicum HOM05M000221 ORTHO05M001760 3.6e-15 84.7 55 81.8
Potri.004G075450 Populus trichocarpa HOM05M000221 ORTHO05M001760 4.7e-15 84.3 55 83.6
Potri.004G075525 Populus trichocarpa HOM05M000221 ORTHO05M001760 4.7e-15 84.3 55 83.6
Pp3c17_2590 Physcomitrium patens HOM05M000221 ORTHO05M001760 8.0e-15 83.6 55 80.0
MCO12G325 Micromonas commoda HOM05M000221 ORTHO05M001760 1.0e-14 83.2 54 75.9
SEGI_36012 Sequoiadendron giganteum HOM05M000221 ORTHO05M001760 1.0e-14 83.2 57 71.9
Glyma.14G211500 Glycine max HOM05M000221 ORTHO05M001760 1.4e-14 82.8 61 72.1
AT5G37310 Arabidopsis thaliana HOM05M000221 ORTHO05M001760 1.8e-14 82.4 55 78.2
SMO358G0387 Selaginella moellendorffii HOM05M000221 ORTHO05M001760 1.8e-14 82.4 54 75.9
Mapoly0006s0233 Marchantia polymorpha HOM05M000221 ORTHO05M001760 4.0e-14 81.3 55 74.5
SMO118G0138 Selaginella moellendorffii HOM05M000221 ORTHO05M001760 6.8e-14 80.5 54 75.9
Glyma.02G241800 Glycine max HOM05M000221 ORTHO05M001760 1.5e-13 79.3 61 68.9
Mapoly0006s0086 Marchantia polymorpha HOM05M000221 ORTHO05M001760 2.0e-13 79.0 54 68.5
SEGI_37664 Sequoiadendron giganteum HOM05M000221 ORTHO05M001760 2.0e-13 79.0 57 70.2
Ma06_g07620 Musa acuminata HOM05M000221 ORTHO05M001760 9.8e-13 76.6 53 79.2
Pp3c21_16480 Physcomitrium patens HOM05M000221 ORTHO05M001760 1.7e-12 75.9 54 72.2
CDE12G0068 Ceratophyllum demersum HOM05M000221 ORTHO05M001760 2.2e-12 75.5 40 92.5
Pp3c18_8900 Physcomitrium patens HOM05M000221 ORTHO05M001760 2.2e-12 75.5 54 72.2
CBR_g39866 Chara braunii HOM05M000221 ORTHO05M001760 2.9e-12 75.1 54 66.7
Solyc01g005030.4 Solanum lycopersicum HOM05M000221 ORTHO05M001760 4.9e-12 74.3 55 69.1
Cre01.g024350 Chlamydomonas reinhardtii HOM05M000221 ORTHO05M001760 1.4e-11 72.8 54 66.7
Cre16.g675958 Chlamydomonas reinhardtii HOM05M000221 ORTHO05M001760 3.5e-10 68.2 54 59.3
ATR0598G339 Amborella trichopoda HOM05M000221 ORTHO05M001760 2.3e-09 65.5 61 57.4
Sspon.06G0022870-1B Saccharum spontaneum HOM05M015886 ORTHO05M017147 1.1e-08 63.2 70 60.0
PRCOL_00007004 Prasinoderma coloniale HOM05M000221 ORTHO05M001760 2.5e-08 62.0 54 59.3
DDU440G0139 Dioscorea dumetorum HOM05M000221 ORTHO05M107135 1.1e-06 56.6 55 56.4
DDU782G0018 Dioscorea dumetorum HOM05M000221 ORTHO05M001760 1.1e-06 56.6 55 56.4
Solyc06g048940.4 Solanum lycopersicum HOM05M000221 ORTHO05M001760 1.8e-06 55.8 52 59.6
Potri.004G203200 Populus trichocarpa HOM05M000221 ORTHO05M001760 3.1e-06 55.1 53 54.7
AT1G08350 Arabidopsis thaliana HOM05M000221 ORTHO05M001760 8.9e-06 53.5 54 53.7


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