Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G012200 Miscanthus sinensis HOM05M001992 ORTHO05M002180 2.4e-93 344.7 174 100.0
Sobic.004G013500 Sorghum bicolor HOM05M001992 ORTHO05M002180 3.8e-91 337.4 173 98.3
Sspon.04G0020320-1A Saccharum spontaneum HOM05M001992 ORTHO05M002180 8.4e-91 336.3 173 97.7
Sspon.04G0020320-2C Saccharum spontaneum HOM05M001992 ORTHO05M002180 8.4e-91 336.3 173 97.7
Misin07G014500 Miscanthus sinensis HOM05M001992 ORTHO05M002180 5.5e-90 333.6 173 96.5
Dexi1B01G0001330 Digitaria exilis HOM05M001992 ORTHO05M002180 2.7e-89 331.3 173 96.0
GWHGAORA014933 Cenchrus purpureus HOM05M001992 ORTHO05M002180 1.8e-88 328.6 173 95.4
GWHGAORA014981 Cenchrus purpureus HOM05M001992 ORTHO05M002180 2.3e-88 328.2 173 95.4
GWHGAORA017666 Cenchrus purpureus HOM05M001992 ORTHO05M002180 3.9e-88 327.4 173 95.4
GWHGAORA058043 Cenchrus purpureus HOM05M001992 ORTHO05M002180 5.1e-88 327.0 173 94.8
Sevir.1G112300 Setaria viridis HOM05M001992 ORTHO05M002180 5.1e-88 327.0 173 95.4
Zm00001eb230070 Zea mays B73 HOM05M001992 ORTHO05M002180 1.1e-87 325.9 173 94.8
Pahal.1G013200 Panicum hallii HOM05M001992 ORTHO05M002180 1.9e-87 325.1 173 94.2
Zm00007a00039596 Zea mays B104 HOM05M001992 ORTHO05M002180 3.3e-87 324.3 173 94.8
Seita.1G112800 Setaria italica HOM05M001992 ORTHO05M002180 4.3e-87 323.9 173 94.8
OB02G11130 Oryza brachyantha HOM05M001992 ORTHO05M002180 4.1e-85 317.4 173 90.8
Dexi1A01G0001340 Digitaria exilis HOM05M001992 ORTHO05M002180 6.9e-85 316.6 189 87.3
PH02Gene05641 Phyllostachys edulis HOM05M001992 ORTHO05M002180 9.0e-85 316.2 173 93.1
Bradi3g01640 Brachypodium distachyon HOM05M001992 ORTHO05M002180 1.5e-84 315.5 173 91.3
Ot_Chr1_g14167 Oropetium thomaeum HOM05M001992 ORTHO05M002180 1.5e-84 315.5 173 90.8
OsKitaake02g013600 Oryza sativa Kitaake HOM05M001992 ORTHO05M002180 2.0e-84 315.1 173 89.6
OsR498G0202852400.01 Oryza sativa ssp. indica HOM05M001992 ORTHO05M002180 2.0e-84 315.1 173 89.6
Os02g0117700 Oryza sativa ssp. japonica HOM05M001992 ORTHO05M002180 2.0e-84 315.1 173 89.6
GWHGAZTO068026 Oryza alta HOM05M001992 ORTHO05M002180 2.6e-84 314.7 173 90.2
Horvu_MOREX_6H01G057300 Hordeum vulgare HOM05M001992 ORTHO05M002180 4.5e-84 313.9 173 90.2
V3.Lp_chr6_0G2238 Lolium perenne HOM05M001992 ORTHO05M002180 4.5e-84 313.9 173 89.6
EJB05_25479 Eragrostis curvula HOM05M001992 ORTHO05M002180 5.9e-84 313.5 173 89.6
GWHGASIY023302 Secale cereale HOM05M001992 ORTHO05M002180 1.3e-83 312.4 173 89.6
Zjn_sc00155.1.g00700.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001992 ORTHO05M002180 6.5e-83 310.1 173 88.4
GWHGAZTO016298 Oryza alta HOM05M001992 ORTHO05M002180 1.4e-82 308.9 173 89.0
TRIDC6BG008590 Triticum dicoccoides HOM05M001992 ORTHO05M002180 4.2e-82 307.4 173 87.9
TraesCS6A03G0111500 Triticum aestivum HOM05M001992 ORTHO05M002180 7.2e-82 306.6 173 87.9
TRIDC6AG006110 Triticum dicoccoides HOM05M001992 ORTHO05M002180 7.2e-82 306.6 173 87.9
TRITD6Av1G010000 Triticum turgidum HOM05M001992 ORTHO05M002180 7.2e-82 306.6 173 87.9
TRITD6Bv1G014730 Triticum turgidum HOM05M001992 ORTHO05M002180 9.3e-82 306.2 173 87.3
DDU689G0497 Dioscorea dumetorum HOM05M001992 ORTHO05M002180 4.5e-76 287.3 171 81.9
Ma09_g24400 Musa acuminata HOM05M001992 ORTHO05M002180 4.5e-76 287.3 173 82.1
PH02Gene30298 Phyllostachys edulis HOM05M001992 ORTHO05M002180 5.9e-76 287.0 172 82.0
Aco018378 Ananas comosus HOM05M001992 ORTHO05M002180 7.7e-76 286.6 172 81.4
Zm00001eb104400 Zea mays B73 HOM05M001992 ORTHO05M002180 1.3e-75 285.8 171 81.9
evm.TU.AsparagusV1_07.2347.V1.1 Asparagus officinalis HOM05M001992 ORTHO05M002180 2.2e-75 285.0 170 81.2
Sobic.002G291200 Sorghum bicolor HOM05M001992 ORTHO05M002180 2.2e-75 285.0 171 82.5
Zm00001eb320800 Zea mays B73 HOM05M001992 ORTHO05M002180 2.2e-75 285.0 171 81.9
Misin04G273100 Miscanthus sinensis HOM05M001992 ORTHO05M002180 6.5e-75 283.5 171 81.3
Misin03G256800 Miscanthus sinensis HOM05M001992 ORTHO05M002180 8.5e-75 283.1 171 81.3
Zjn_sc00165.1.g00110.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001992 ORTHO05M002180 1.1e-74 282.7 171 81.3
Pahal.2G360000 Panicum hallii HOM05M001992 ORTHO05M002180 1.4e-74 282.3 171 81.3
Zm00007a00018151 Zea mays B104 HOM05M001992 ORTHO05M002180 2.5e-74 281.6 171 81.3
AET6Gv20128800 Aegilops tauschii HOM05M001992 ORTHO05M002180 3.2e-74 281.2 161 87.0
Ma03_g28150 Musa acuminata HOM05M001992 ORTHO05M002180 4.2e-74 280.8 173 80.3
EJB05_43885 Eragrostis curvula HOM05M001992 ORTHO05M002180 1.2e-73 279.3 171 80.1
GWHGAORA048533 Cenchrus purpureus HOM05M001992 ORTHO05M002180 2.1e-73 278.5 171 79.5
Ot_Chr2_gn32141 Oropetium thomaeum HOM05M001992 ORTHO05M002180 2.1e-73 278.5 171 79.5
OsKitaake09g191800 Oryza sativa Kitaake HOM05M001992 ORTHO05M002180 2.1e-73 278.5 172 80.2
OsR498G0917927700.01 Oryza sativa ssp. indica HOM05M001992 ORTHO05M002180 2.1e-73 278.5 172 80.2
Os09g0553200 Oryza sativa ssp. japonica HOM05M001992 ORTHO05M002180 2.1e-73 278.5 172 80.2
Seita.2G301600 Setaria italica HOM05M001992 ORTHO05M002180 2.1e-73 278.5 171 79.5
HPP92_003187 Vanilla planifolia HOM05M001992 ORTHO05M002180 2.7e-73 278.1 170 79.4
Sevir.2G312500 Setaria viridis HOM05M001992 ORTHO05M002180 3.6e-73 277.7 171 78.9
Bradi4g37350 Brachypodium distachyon HOM05M001992 ORTHO05M002180 4.6e-73 277.3 172 78.5
TraesCS5B03G0893700 Triticum aestivum HOM05M001992 ORTHO05M002180 6.1e-73 276.9 172 78.5
TRIDC5BG056020 Triticum dicoccoides HOM05M001992 ORTHO05M002180 6.1e-73 276.9 172 78.5
TRITD5Bv1G184780 Triticum turgidum HOM05M001992 ORTHO05M002180 6.1e-73 276.9 172 78.5
Asa3G01722 Allium sativum HOM05M001992 ORTHO05M002180 1.0e-72 276.2 170 78.2
AET5Gv20821100 Aegilops tauschii HOM05M001992 ORTHO05M002180 1.4e-72 275.8 172 77.9
TraesCS5A03G0850600 Triticum aestivum HOM05M001992 ORTHO05M002180 1.4e-72 275.8 172 77.9
TraesCS5D03G0812800 Triticum aestivum HOM05M001992 ORTHO05M002180 1.4e-72 275.8 172 77.9
TRIDC5AG051670 Triticum dicoccoides HOM05M001992 ORTHO05M002180 1.4e-72 275.8 172 77.9
TRITD5Av1G192450 Triticum turgidum HOM05M001992 ORTHO05M002180 1.4e-72 275.8 172 77.9
CALSI_Maker00034811 Calamus simplicifolius HOM05M001992 ORTHO05M002180 2.3e-72 275.0 171 77.8
Horvu_MOREX_5H01G521200 Hordeum vulgare HOM05M001992 ORTHO05M002180 2.3e-72 275.0 172 77.9
MBI08_g09800_MAGBIO Magnolia biondii HOM05M001992 ORTHO05M002180 2.3e-72 275.0 170 77.6
GWHGASIY027200 Secale cereale HOM05M001992 ORTHO05M002180 2.3e-72 275.0 172 77.9
GWHGASIY027861 Secale cereale HOM05M001992 ORTHO05M002180 2.3e-72 275.0 172 77.9
evm.TU.AsparagusV1_07.3486.V1.1 Asparagus officinalis HOM05M001992 ORTHO05M002180 3.9e-72 274.2 170 80.0
OB09G25610 Oryza brachyantha HOM05M001992 ORTHO05M002180 3.9e-72 274.2 172 79.1
DDU543G0016 Dioscorea dumetorum HOM05M001992 ORTHO05M002180 1.1e-71 272.7 186 74.2
Spipo16G0026600 Spirodela polyrhiza HOM05M001992 ORTHO05M002180 4.3e-71 270.8 170 78.2
Sspon.02G0008310-2B Saccharum spontaneum HOM05M001992 ORTHO05M002180 9.7e-71 269.6 171 78.4
Potri.004G074400 Populus trichocarpa HOM05M001992 ORTHO05M002180 1.7e-70 268.9 170 75.9
Spipo17G0034300 Spirodela polyrhiza HOM05M001992 ORTHO05M002180 4.8e-70 267.3 170 76.5
V3.Lp_chr5_0G18266 Lolium perenne HOM05M001992 ORTHO05M002180 6.3e-70 266.9 171 76.0
Glyma.14G210700 Glycine max HOM05M001992 ORTHO05M002180 1.4e-69 265.8 172 75.6
GWHGAZTO052641 Oryza alta HOM05M001992 ORTHO05M002180 1.4e-69 265.8 183 73.8
GWHGAORA055235 Cenchrus purpureus HOM05M001992 ORTHO05M002180 4.1e-69 264.2 175 82.3
Potri.017G144700 Populus trichocarpa HOM05M001992 ORTHO05M002180 4.1e-69 264.2 169 75.1
GWHGAORA007300 Cenchrus purpureus HOM05M001992 ORTHO05M002180 5.3e-69 263.8 155 81.3
Dexi2B01G0024070 Digitaria exilis HOM05M001992 ORTHO05M002180 5.3e-69 263.8 154 83.1
Glyma.02G241100 Glycine max HOM05M001992 ORTHO05M002180 2.0e-68 261.9 172 74.4
Zosma03g27870 Zostera marina HOM05M001992 ORTHO05M002180 3.4e-68 261.2 170 75.9
ATR0807G128 Amborella trichopoda HOM05M001992 ORTHO05M002180 1.7e-67 258.8 170 74.1
Solyc11g011960.2 Solanum lycopersicum HOM05M001992 ORTHO05M002180 5.0e-67 257.3 170 74.7
Glyma.11G210989 Glycine max HOM05M001992 ORTHO05M002180 1.1e-66 256.1 170 72.9
Solyc05g054060.3 Solanum lycopersicum HOM05M001992 ORTHO05M002180 1.9e-66 255.4 170 74.7
CDE04G1424 Ceratophyllum demersum HOM05M001992 ORTHO05M002180 7.2e-66 253.4 170 71.2
AT5G17310 Arabidopsis thaliana HOM05M001992 ORTHO05M002180 1.6e-65 252.3 172 70.9
AT3G03250 Arabidopsis thaliana HOM05M001992 ORTHO05M002180 3.6e-65 251.1 170 70.6
Zjn_sc00041.1.g02190.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001992 ORTHO05M002180 1.8e-61 238.8 171 71.9
SEGI_33272 Sequoiadendron giganteum HOM05M001992 ORTHO05M002180 2.0e-60 235.3 170 70.0
GWHGAZTO099051 Oryza alta HOM05M001992 ORTHO05M002180 5.9e-60 233.8 172 70.3
Pp3c11_690 Physcomitrium patens HOM05M001992 ORTHO05M002180 1.3e-59 232.6 170 68.2
Pp3c1_140 Physcomitrium patens HOM05M001992 ORTHO05M002180 1.3e-59 232.6 170 68.2
Dexi2A01G0025470 Digitaria exilis HOM05M001992 ORTHO05M002180 2.3e-56 221.9 154 73.4
Sspon.02G0008310-1T Saccharum spontaneum HOM05M001992 ORTHO05M002180 2.4e-53 211.8 189 61.4
Sspon.02G0008310-3D Saccharum spontaneum HOM05M001992 ORTHO05M002180 2.4e-53 211.8 189 61.4
SMO358G0524 Selaginella moellendorffii HOM05M001992 ORTHO05M002180 7.0e-53 210.3 158 66.5
Mapoly0072s0036 Marchantia polymorpha HOM05M001992 ORTHO05M002180 2.7e-52 208.4 168 63.7
AagrBONN_evm.TU.Sc2ySwM_228.431 Anthoceros agrestis HOM05M001992 ORTHO05M002180 6.5e-51 203.8 161 64.6
GWHGAORA048498 Cenchrus purpureus HOM05M001992 ORTHO05M002180 2.1e-49 198.7 171 60.2
Zm00007a00007948 Zea mays B104 HOM05M001992 ORTHO05M002180 8.3e-46 186.8 124 75.8
GWHGAZTO005161 Oryza alta HOM05M006360 ORTHO05M007794 2.9e-43 178.3 104 82.7
CDE02G0713 Ceratophyllum demersum HOM05M001992 ORTHO05M002180 6.5e-43 177.2 108 78.7
GWHGAZTO040220 Oryza alta HOM05M001992 ORTHO05M002180 4.7e-41 171.0 133 64.7
Os01g0264100 Oryza sativa ssp. japonica HOM05M001992 ORTHO05M002180 1.8e-40 169.1 136 61.8
GWHGAZTO054321 Oryza alta HOM05M001992 ORTHO05M002180 6.8e-40 167.2 133 63.2
GWHGAORA064275 Cenchrus purpureus HOM05M001992 ORTHO05M002180 3.4e-39 164.9 83 97.6
TraesCS2B03G1429900 Triticum aestivum HOM05M001992 ORTHO05M004049 1.1e-37 159.8 94 84.0
CALSI_Maker00043491 Calamus simplicifolius HOM05M001992 ORTHO05M002180 1.4e-37 159.5 100 79.0
Aco013017 Ananas comosus HOM05M001992 ORTHO05M002180 5.9e-36 154.1 172 49.4
GWHGAORA043283 Cenchrus purpureus HOM05M001992 ORTHO05M002180 7.7e-36 153.7 83 94.0
CBR_g4484 Chara braunii HOM05M001992 ORTHO05M002180 1.5e-34 149.4 132 60.6
MBI06_g07519_MAGBIO Magnolia biondii HOM05M001992 ORTHO05M002180 6.4e-30 134.0 99 67.7
Glyma.06G001900 Glycine max HOM05M001992 ORTHO05M002180 8.3e-30 133.7 111 57.7
Sspon.02G0008310-1A Saccharum spontaneum HOM05M001992 ORTHO05M002180 1.1e-29 133.3 77 81.8
Solyc01g081520.3 Solanum lycopersicum HOM05M001992 ORTHO05M002180 1.8e-29 132.5 136 51.5
Asa4G06443 Allium sativum HOM05M001992 ORTHO05M002180 4.1e-29 131.3 83 78.3
Potri.004G074750 Populus trichocarpa HOM05M001992 ORTHO05M002180 8.6e-27 123.6 77 75.3
GWHGAZTO057493 Oryza alta HOM05M001992 ORTHO05M002180 8.0e-25 117.1 122 55.7
Potri.013G070001 Populus trichocarpa HOM05M001992 ORTHO05M002180 4.0e-24 114.8 112 49.1
Pp3c23_20400 Physcomitrium patens HOM05M001992 ORTHO05M002180 8.9e-24 113.6 132 48.5
TraesCS7B03G1131500 Triticum aestivum HOM05M001992 ORTHO05M004049 1.3e-22 109.8 100 58.0
TraesCS1A03G0602500 Triticum aestivum HOM05M001992 ORTHO05M002180 2.2e-22 109.0 57 91.2
TRIDC1AG034920 Triticum dicoccoides HOM05M001992 ORTHO05M002180 2.2e-22 109.0 57 91.2
TRITD1Av1G148420 Triticum turgidum HOM05M001992 ORTHO05M002180 2.2e-22 109.0 57 91.2
TraesCS5B03G0046200 Triticum aestivum HOM05M003553 ORTHO05M004049 6.4e-22 107.5 70 75.7
EJB05_43842 Eragrostis curvula HOM05M001992 ORTHO05M002180 1.3e-19 99.8 83 61.4
OB01G24010 Oryza brachyantha HOM05M001992 ORTHO05M002180 6.6e-19 97.4 68 67.6
CALSI_Maker00049488 Calamus simplicifolius HOM05M001992 ORTHO05M002180 1.6e-17 92.8 64 68.8
CALSI_Maker00021220 Calamus simplicifolius HOM05M001992 ORTHO05M002180 1.1e-16 90.1 77 59.7
MBI06_g07521_MAGBIO Magnolia biondii HOM05M001992 ORTHO05M002180 4.0e-16 88.2 62 64.5
Sspon.01G0062150-1D Saccharum spontaneum HOM05M001992 ORTHO05M002180 9.8e-15 83.6 131 43.5
Cre04.g229700 Chlamydomonas reinhardtii HOM05M001992 ORTHO05M002180 7.8e-12 73.9 86 51.2
DDU775G0363 Dioscorea dumetorum HOM05M000330 ORTHO05M001483 4.0e-08 61.6 48 60.4
GWHGAORA013197 Cenchrus purpureus HOM05M001992 ORTHO05M002180 2.6e-07 58.9 34 85.3
GWHGAZTO057491 Oryza alta HOM05M001992 ORTHO05M002180 5.8e-07 57.8 33 87.9
GWHGAORA047248 Cenchrus purpureus HOM05M001992 ORTHO05M082828 1.3e-06 56.6 80 45.0
DDU500G0189 Dioscorea dumetorum HOM05M001992 ORTHO05M002180 8.4e-06 53.9 36 66.7

Aegilops tauschii (2 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus purpureus (12 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (4 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (3 genes)
Glycine max (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (9 genes)
Oryza brachyantha (3 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (3 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (7 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (8 genes)
Triticum dicoccoides (5 genes)
Triticum turgidum (5 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings