Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0052s0044 Marchantia polymorpha HOM05M002591 ORTHO05M002977 0.0e+00 1908.6 957 100.0
Pp3c11_24680 Physcomitrium patens HOM05M002591 ORTHO05M002977 1.6e-284 982.2 720 67.4
AagrBONN_evm.TU.Sc2ySwM_117.4074 Anthoceros agrestis HOM05M002591 ORTHO05M002977 1.5e-253 879.4 638 65.7
Potri.017G081900 Populus trichocarpa HOM05M002591 ORTHO05M002977 4.6e-231 804.7 617 61.3
SMO356G0765 Selaginella moellendorffii HOM05M002591 ORTHO05M002977 3.3e-229 798.5 572 64.2
MBI05_g08280_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 2.8e-228 795.4 630 59.0
MBI06_g06491_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 1.8e-227 792.7 617 59.6
CDE04G1324 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 1.5e-226 789.6 612 60.3
AT5G39840 Arabidopsis thaliana HOM05M002591 ORTHO05M002977 2.2e-225 785.8 605 61.0
CDE07G1280 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 2.2e-225 785.8 612 60.1
ATR0564G515 Amborella trichopoda HOM05M002591 ORTHO05M002977 4.9e-225 784.6 617 60.1
Glyma.19G021800 Glycine max HOM05M002591 ORTHO05M002977 2.7e-223 778.9 612 60.3
Glyma.13G063500 Glycine max HOM05M002591 ORTHO05M002977 1.3e-222 776.5 613 60.4
CALSI_Maker00032471 Calamus simplicifolius HOM05M002591 ORTHO05M002977 4.3e-221 771.5 614 60.4
p5.00_sc00035_p0057 Elaeis guineensis HOM05M002591 ORTHO05M002977 1.4e-219 766.5 587 61.8
Ma10_g29780 Musa acuminata HOM05M002591 ORTHO05M002977 1.4e-219 766.5 620 59.8
Solyc11g011460.2 Solanum lycopersicum HOM05M002591 ORTHO05M002977 1.8e-219 766.1 599 59.4
SEGI_33056 Sequoiadendron giganteum HOM05M002591 ORTHO05M002977 7.1e-216 754.2 615 57.9
HPP92_004328 Vanilla planifolia HOM05M002591 ORTHO05M002977 2.1e-215 752.7 594 60.3
DDU033G0014 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 2.3e-214 749.2 585 60.2
DDU049G0210 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 3.0e-214 748.8 585 60.2
EJB05_37700 Eragrostis curvula HOM05M002591 ORTHO05M002977 1.3e-212 743.4 599 59.3
EJB05_37633 Eragrostis curvula HOM05M002591 ORTHO05M002977 1.6e-212 743.0 599 59.3
Sspon.05G0009940-2C Saccharum spontaneum HOM05M002591 ORTHO05M002977 4.1e-211 738.4 598 59.2
Sspon.05G0009940-3D Saccharum spontaneum HOM05M002591 ORTHO05M002977 4.1e-211 738.4 598 59.2
Spipo0G0053900 Spirodela polyrhiza HOM05M002591 ORTHO05M002977 4.1e-211 738.4 599 60.1
Sobic.006G106300 Sorghum bicolor HOM05M002591 ORTHO05M002977 9.0e-211 737.3 611 58.4
Misin12G105500 Miscanthus sinensis HOM05M002591 ORTHO05M002977 4.5e-210 734.9 598 59.0
Ot_Chr6_g20699 Oropetium thomaeum HOM05M002591 ORTHO05M002977 4.5e-210 734.9 598 59.2
Seita.7G123800 Setaria italica HOM05M002591 ORTHO05M002977 1.9e-208 729.6 571 60.4
Sevir.7G132100 Setaria viridis HOM05M002591 ORTHO05M002977 7.1e-208 727.6 571 60.2
GWHGAORA023986 Cenchrus purpureus HOM05M002591 ORTHO05M002977 9.3e-208 727.2 579 60.1
Asa6G03815 Allium sativum HOM05M002591 ORTHO05M002977 1.6e-207 726.5 587 58.3
Asa1G02076 Allium sativum HOM05M002591 ORTHO05M002977 2.1e-207 726.1 587 58.3
GWHGAZTO029914 Oryza alta HOM05M002591 ORTHO05M002977 4.6e-207 724.9 576 60.2
Pahal.7G177200 Panicum hallii HOM05M002591 ORTHO05M002977 4.6e-207 724.9 573 59.7
GWHGAZTO079608 Oryza alta HOM05M002591 ORTHO05M002977 7.9e-207 724.2 576 60.1
GWHGASIY009165 Secale cereale HOM05M002591 ORTHO05M002977 1.3e-206 723.4 606 57.4
Bradi5g12360 Brachypodium distachyon HOM05M002591 ORTHO05M002977 1.8e-206 723.0 567 60.7
Horvu_MOREX_2H01G480400 Hordeum vulgare HOM05M002591 ORTHO05M002977 3.0e-206 722.2 613 57.4
Zm00001eb080820 Zea mays B73 HOM05M002591 ORTHO05M002977 3.0e-206 722.2 584 57.9
TRIDC2BG049940 Triticum dicoccoides HOM05M002591 ORTHO05M002977 3.9e-206 721.8 606 57.4
OsKitaake04g154900 Oryza sativa Kitaake HOM05M002591 ORTHO05M002977 5.1e-206 721.5 576 59.7
TraesCS2B03G0890000 Triticum aestivum HOM05M002591 ORTHO05M002977 1.9e-205 719.5 606 57.3
TRITD2Bv1G162220 Triticum turgidum HOM05M002591 ORTHO05M002977 1.9e-205 719.5 606 57.3
AET2Gv20734500 Aegilops tauschii HOM05M002591 ORTHO05M002977 3.3e-205 718.8 606 57.3
TraesCS2D03G0745200 Triticum aestivum HOM05M002591 ORTHO05M002977 3.3e-205 718.8 606 57.3
OB04G22230 Oryza brachyantha HOM05M002591 ORTHO05M002977 5.7e-205 718.0 565 60.4
TRITD2Av1G198970 Triticum turgidum HOM05M002591 ORTHO05M002977 7.4e-205 717.6 639 55.4
TRIDC2AG047430 Triticum dicoccoides HOM05M002591 ORTHO05M002977 9.7e-205 717.2 639 55.4
PH02Gene10054 Phyllostachys edulis HOM05M002591 ORTHO05M002977 2.8e-204 715.7 598 58.0
V3.Lp_chr2_0G21842 Lolium perenne HOM05M002591 ORTHO05M002977 1.2e-202 710.3 578 59.2
Os04g0459800 Oryza sativa ssp. japonica HOM05M002591 ORTHO05M002977 1.8e-198 696.4 521 62.0
Aco002875 Ananas comosus HOM05M002591 ORTHO05M002977 4.8e-196 688.3 502 63.7
OsR498G0408697000.01 Oryza sativa ssp. indica HOM05M002591 ORTHO05M002977 1.0e-185 654.1 485 62.1
GWHGAORA061898 Cenchrus purpureus HOM05M002591 ORTHO05M002977 8.5e-185 651.0 573 56.2
Sspon.05G0009940-1P Saccharum spontaneum HOM05M002591 ORTHO05M002977 3.2e-176 622.5 598 52.3
Zm00001eb424140 Zea mays B73 HOM05M002591 ORTHO05M002977 7.7e-170 601.3 493 57.6
Zm00001eb424180 Zea mays B73 HOM05M002591 ORTHO05M002977 7.7e-170 601.3 493 57.6
Zm00007a00023962 Zea mays B104 HOM05M002591 ORTHO05M002977 7.7e-170 601.3 493 57.6
Zjn_sc00058.1.g00910.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM05M002591 ORTHO05M002977 3.6e-167 592.4 434 63.8
CBR_g36977 Chara braunii HOM05M002591 ORTHO05M002977 9.1e-163 577.8 426 62.4
evm.TU.AsparagusV1_03.1688.V1.1 Asparagus officinalis HOM05M002591 ORTHO05M002977 5.8e-149 531.9 405 60.7
Zm00001eb424230 Zea mays B73 HOM05M002591 ORTHO05M002977 1.6e-143 513.8 400 59.8
Sspon.05G0009940-1A Saccharum spontaneum HOM05M002591 ORTHO05M002977 7.8e-138 495.0 372 62.6
PRCOL_00000719 Prasinoderma coloniale HOM05M002591 ORTHO05M002977 6.8e-126 455.3 543 45.1
ATR0665G409 Amborella trichopoda HOM05M002591 ORTHO05M002977 6.2e-119 432.2 470 47.2
Zm00007a00014075 Zea mays B104 HOM05M002591 ORTHO05M002977 5.3e-118 429.1 326 59.8
Potri.010G084100 Populus trichocarpa HOM05M002591 ORTHO05M002977 5.8e-117 425.6 503 44.7
OsKitaake03g336201 Oryza sativa Kitaake HOM05M002591 ORTHO05M002977 2.9e-116 423.3 491 44.8
OsR498G0307041000.01 Oryza sativa ssp. indica HOM05M002591 ORTHO05M002977 2.9e-116 423.3 491 44.8
Os03g0746500 Oryza sativa ssp. japonica HOM05M002591 ORTHO05M002977 2.9e-116 423.3 491 44.8
Bradi1g08847 Brachypodium distachyon HOM05M002591 ORTHO05M002977 3.8e-116 422.9 483 45.1
GWHGAORA019613 Cenchrus purpureus HOM05M002591 ORTHO05M002977 4.9e-116 422.5 483 45.8
Horvu_MOREX_5H01G560300 Hordeum vulgare HOM05M002591 ORTHO05M002977 1.9e-115 420.6 483 45.1
Sobic.001G092200 Sorghum bicolor HOM05M002591 ORTHO05M002977 1.9e-115 420.6 491 45.2
GWHGASIY028222 Secale cereale HOM05M002591 ORTHO05M002977 3.2e-115 419.9 483 45.1
Seita.9G095100 Setaria italica HOM05M002591 ORTHO05M002977 3.2e-115 419.9 483 45.5
Pahal.9G090200 Panicum hallii HOM05M002591 ORTHO05M002977 4.2e-115 419.5 491 45.0
TraesCS5B03G0973300 Triticum aestivum HOM05M002591 ORTHO05M002977 9.3e-115 418.3 483 44.7
Zm00001eb057040 Zea mays B73 HOM05M002591 ORTHO05M002977 1.2e-114 417.9 480 45.8
Misin01G083200 Miscanthus sinensis HOM05M002591 ORTHO05M002977 1.6e-114 417.5 483 44.9
Sevir.9G093600 Setaria viridis HOM05M002591 ORTHO05M002977 2.7e-114 416.8 483 45.3
TraesCS5A03G0921900 Triticum aestivum HOM05M002591 ORTHO05M002977 2.7e-114 416.8 483 44.9
TRITD5Av1G202650 Triticum turgidum HOM05M002591 ORTHO05M002977 2.7e-114 416.8 483 44.9
TRITD5Bv1G198110 Triticum turgidum HOM05M002591 ORTHO05M002977 3.5e-114 416.4 483 44.5
TraesCS5D03G0881300 Triticum aestivum HOM05M002591 ORTHO05M002977 6.0e-114 415.6 483 44.7
Ot_Chr4_g07544 Oropetium thomaeum HOM05M002591 ORTHO05M002977 1.3e-113 414.5 483 45.5
evm.TU.AsparagusV1_03.2935.V1.1 Asparagus officinalis HOM05M002591 ORTHO05M002977 2.3e-113 413.7 480 45.0
PH02Gene30896 Phyllostachys edulis HOM05M002591 ORTHO05M002977 3.9e-113 412.9 484 44.6
Zm00007a00005376 Zea mays B104 HOM05M002591 ORTHO05M002977 3.9e-113 412.9 480 45.8
Misin02G071200 Miscanthus sinensis HOM05M002591 ORTHO05M002977 1.1e-112 411.4 482 44.4
OB03G40960 Oryza brachyantha HOM05M002591 ORTHO05M002977 1.1e-112 411.4 492 44.5
Asa2G06495 Allium sativum HOM05M002591 ORTHO05M002977 1.9e-112 410.6 498 43.8
MCO16G401 Micromonas commoda HOM05M002591 ORTHO05M002977 1.3e-111 407.9 478 44.1
AT4G14790 Arabidopsis thaliana HOM05M002591 ORTHO05M002977 4.8e-111 406.0 483 44.5
SMO196G0191 Selaginella moellendorffii HOM05M002591 ORTHO05M002977 6.9e-110 402.1 470 46.4
HPP92_024843 Vanilla planifolia HOM05M002591 ORTHO05M002977 1.2e-109 401.4 476 43.5
CALSI_Maker00009861 Calamus simplicifolius HOM05M002591 ORTHO05M002977 3.4e-109 399.8 492 42.9
MBI11_g32998_MAGBIO Magnolia biondii HOM05M002591 ORTHO05M002977 7.6e-109 398.7 480 43.3
Glyma.01G235700 Glycine max HOM05M002591 ORTHO05M002977 9.9e-109 398.3 500 42.4
HPP92_026615 Vanilla planifolia HOM05M002591 ORTHO05M002977 9.9e-109 398.3 476 43.3
Aco009695 Ananas comosus HOM05M002591 ORTHO05M002977 1.2e-106 391.3 477 43.2
GWHGAZTO026653 Oryza alta HOM05M002591 ORTHO05M002977 6.0e-106 389.0 401 47.6
p5.00_sc00217_p0030 Elaeis guineensis HOM05M002591 ORTHO05M002977 8.7e-105 385.2 411 46.7
Zm00007a00024553 Zea mays B104 HOM05M002591 ORTHO05M002977 8.7e-105 385.2 284 62.3
Spipo3G0091100 Spirodela polyrhiza HOM05M002591 ORTHO05M002977 1.9e-104 384.0 474 44.9
CDE04G2869 Ceratophyllum demersum HOM05M002591 ORTHO05M002977 3.1e-102 376.7 403 46.4
Glyma.11G007500 Glycine max HOM05M002591 ORTHO05M002977 5.3e-102 375.9 497 41.2
EJB05_04528 Eragrostis curvula HOM05M002591 ORTHO05M002977 2.6e-101 373.6 386 48.7
Ma07_g27290 Musa acuminata HOM05M002591 ORTHO05M002977 1.0e-97 361.7 437 42.6
GWHGAORA050937 Cenchrus purpureus HOM05M002591 ORTHO05M002977 1.8e-97 360.9 480 41.2
Zjn_sc00014.1.g03920.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002591 ORTHO05M002977 8.4e-92 342.0 401 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3584 Anthoceros agrestis HOM05M002591 ORTHO05M002977 3.6e-90 336.7 372 46.8
Dexi7B01G0009660 Digitaria exilis HOM05M002591 ORTHO05M002977 6.9e-86 322.4 264 56.8
TRIDC5BG060290 Triticum dicoccoides HOM05M002591 ORTHO05M002977 4.2e-83 313.2 393 42.0
Aco023211 Ananas comosus HOM05M003172 ORTHO05M003204 2.1e-82 310.8 346 46.8
DDU444G0084 Dioscorea dumetorum HOM05M002591 ORTHO05M002977 2.2e-79 300.8 373 43.2
Zm00007a00023959 Zea mays B104 HOM05M002591 ORTHO05M002977 9.1e-78 295.4 351 43.3
Zosma03g32970 Zostera marina HOM05M002591 ORTHO05M002977 3.4e-77 293.5 419 40.1
GWHGAORA050955 Cenchrus purpureus HOM05M002591 ORTHO05M002977 3.6e-74 283.5 483 36.6
Zm00007a00023967 Zea mays B104 HOM05M002591 ORTHO05M002977 3.9e-73 280.0 214 60.3
Sevir.6G070900 Setaria viridis HOM05M002591 ORTHO05M002977 1.8e-70 271.2 242 53.7
Zm00001eb424090 Zea mays B73 HOM05M002591 ORTHO05M002977 4.7e-66 256.5 179 64.8
Cre06.g270900 Chlamydomonas reinhardtii HOM05M002591 ORTHO05M002977 8.8e-65 252.3 605 30.2
AET5Gv20897000 Aegilops tauschii HOM05M002591 ORTHO05M002977 3.4e-56 223.8 300 40.0
GWHGAZTO076546 Oryza alta HOM05M002591 ORTHO05M002977 1.2e-42 178.7 218 42.7
Sspon.01G0061530-1D Saccharum spontaneum HOM05M002591 ORTHO05M002977 4.7e-42 176.8 151 54.3
Zm00001eb424200 Zea mays B73 HOM05M002591 ORTHO05M027150 1.2e-34 152.1 142 52.8
Zm00007a00024549 Zea mays B104 HOM05M002591 ORTHO05M027150 2.6e-32 144.4 104 62.5
evm.TU.AsparagusV1_03.1687.V1.1 Asparagus officinalis HOM05M002591 ORTHO05M002977 3.4e-32 144.1 128 56.2
Zm00007a00023965 Zea mays B104 HOM05M002591 ORTHO05M027150 3.7e-31 140.6 97 64.9
Zm00007a00035722 Zea mays B104 HOM05M002591 ORTHO05M002977 6.0e-21 106.7 147 38.1
Zm00007a00023960 Zea mays B104 HOM05M002591 ORTHO05M002977 1.0e-20 105.9 104 50.0
SMO196G0031 Selaginella moellendorffii HOM05M015296 ORTHO05M234773 3.9e-20 104.0 484 25.4
CBR_g36979 Chara braunii HOM05M000890 ORTHO05M000696 5.1e-20 103.6 134 37.3
Zm00001eb424100 Zea mays B73 HOM05M002591 ORTHO05M002977 4.6e-13 80.5 91 44.0
Zm00001eb424080 Zea mays B73 HOM05M002591 ORTHO05M270242 1.9e-11 75.1 58 51.7
MCO05G364 Micromonas commoda HOM05M000930 ORTHO05M136473 6.9e-09 66.6 317 25.6
Zm00007a00001687 Zea mays B104 HOM05M000561 ORTHO05M000631 2.4e-06 58.2 45 53.3
p5.00_sc00077_p0035 Elaeis guineensis HOM05M000930 ORTHO05M002305 9.3e-06 56.2 184 27.7


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