Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0061 Marchantia polymorpha HOM05M006070 ORTHO05M007653 9.5e-153 542.7 279 100.0
Pp3c10_170 Physcomitrium patens HOM05M006070 ORTHO05M007653 2.6e-102 375.2 277 69.3
SMO115G0347 Selaginella moellendorffii HOM05M006070 ORTHO05M007653 3.2e-92 341.7 282 63.5
Glyma.07G070800 Glycine max HOM05M006070 ORTHO05M007653 6.7e-90 334.0 277 61.0
Ma03_g22880 Musa acuminata HOM05M006070 ORTHO05M007653 4.3e-89 331.3 277 59.9
Sobic.002G009200 Sorghum bicolor HOM05M006070 ORTHO05M007653 1.1e-87 326.6 277 60.3
GWHGASIY031036 Secale cereale HOM05M006070 ORTHO05M007653 5.3e-87 324.3 277 61.0
Seita.1G037400 Setaria italica HOM05M006070 ORTHO05M007653 1.5e-86 322.8 277 59.6
Sevir.1G036600 Setaria viridis HOM05M006070 ORTHO05M007653 1.5e-86 322.8 277 59.6
TRITD5Av1G234260 Triticum turgidum HOM05M006070 ORTHO05M007653 2.0e-86 322.4 277 60.3
OB0096G10030 Oryza brachyantha HOM05M006070 ORTHO05M007653 3.4e-86 321.6 277 60.3
OsR498G1119916600.01 Oryza sativa ssp. indica HOM05M006070 ORTHO05M007653 3.4e-86 321.6 277 59.9
Misin16G076400 Miscanthus sinensis HOM05M006070 ORTHO05M007653 5.9e-86 320.9 277 59.9
Pahal.7G156800 Panicum hallii HOM05M006070 ORTHO05M007653 5.9e-86 320.9 277 59.6
Potri.008G094600 Populus trichocarpa HOM05M006070 ORTHO05M007653 7.7e-86 320.5 277 58.1
Zm00001eb298610 Zea mays B73 HOM05M006070 ORTHO05M007653 2.2e-85 318.9 277 58.5
TraesCS5B03G1206600 Triticum aestivum HOM05M006070 ORTHO05M007653 2.9e-85 318.5 277 59.6
TRIDC5BG074410 Triticum dicoccoides HOM05M006070 ORTHO05M007653 2.9e-85 318.5 277 59.6
Bradi1g03560 Brachypodium distachyon HOM05M006070 ORTHO05M007653 5.0e-85 317.8 277 59.6
AET5Gv21116400 Aegilops tauschii HOM05M006070 ORTHO05M007653 1.1e-84 316.6 277 59.2
TRIDC5AG068950 Triticum dicoccoides HOM05M006070 ORTHO05M007653 1.1e-84 316.6 277 59.6
TraesCS5A03G1135600 Triticum aestivum HOM05M006070 ORTHO05M007653 2.7e-83 312.0 277 59.6
Aco011283 Ananas comosus HOM05M006070 ORTHO05M007653 3.6e-83 311.6 308 54.9
TraesCS5D03G1089100 Triticum aestivum HOM05M006070 ORTHO05M007653 3.6e-83 311.6 277 58.8
AT1G13870 Arabidopsis thaliana HOM05M006070 ORTHO05M007653 7.4e-81 303.9 277 55.6
HPP92_017746 Vanilla planifolia HOM05M006070 ORTHO05M007653 3.7e-80 301.6 277 59.2
MBI03_g07691_MAGBIO Magnolia biondii HOM05M006070 ORTHO05M007653 1.1e-79 300.1 289 55.4
TRITD5Bv1G233980 Triticum turgidum HOM05M006070 ORTHO05M007653 3.5e-78 295.0 277 57.8
ATR1136G145 Amborella trichopoda HOM05M006070 ORTHO05M007653 5.0e-77 291.2 255 57.3
EJB05_02255 Eragrostis curvula HOM05M006070 ORTHO05M007653 1.9e-76 289.3 277 56.3
Solyc08g008250.3 Solanum lycopersicum HOM05M006070 ORTHO05M007653 4.2e-76 288.1 225 63.6
Dexi2B01G0036390 Digitaria exilis HOM05M006070 ORTHO05M007653 1.0e-74 283.5 249 57.4
Horvu_MOREX_5H01G680400 Hordeum vulgare HOM05M006070 ORTHO05M007653 1.4e-74 283.1 249 59.0
Spipo14G0036900 Spirodela polyrhiza HOM05M006070 ORTHO05M007653 1.4e-74 283.1 249 58.2
Zosma04g16310 Zostera marina HOM05M006070 ORTHO05M007653 4.0e-74 281.6 251 58.2
GWHGAORA015863 Cenchrus purpureus HOM05M006070 ORTHO05M007653 5.2e-74 281.2 289 54.3
GWHGAZTO011482 Oryza alta HOM05M006070 ORTHO05M007653 1.5e-73 279.6 249 58.2
GWHGAORA015256 Cenchrus purpureus HOM05M006070 ORTHO05M007653 1.7e-72 276.2 249 57.0
Misin04G011900 Miscanthus sinensis HOM05M006070 ORTHO05M007653 4.8e-72 274.6 225 60.0
Seita.9G016000 Setaria italica HOM05M006070 ORTHO05M007653 4.8e-72 274.6 300 51.7
CBR_g32247 Chara braunii HOM05M006070 ORTHO05M007653 6.3e-72 274.2 321 50.2
Dexi2A01G0037380 Digitaria exilis HOM05M006070 ORTHO05M007653 1.4e-71 273.1 265 54.0
CDE04G1019 Ceratophyllum demersum HOM05M006070 ORTHO05M007653 2.4e-71 272.3 249 56.6
Asa3G02490 Allium sativum HOM05M006070 ORTHO05M007653 4.1e-71 271.6 253 54.5
OsKitaake11g113500 Oryza sativa Kitaake HOM05M006070 ORTHO05M007653 7.0e-71 270.8 277 53.8
V3.Lp_chr4_0G2400 Lolium perenne HOM05M006070 ORTHO05M007653 2.9e-69 265.4 234 59.8
evm.TU.AsparagusV1_10.1133.V1.1 Asparagus officinalis HOM05M006070 ORTHO05M007653 2.4e-63 245.7 199 60.8
DDU879G0562 Dioscorea dumetorum HOM05M006070 ORTHO05M007653 4.1e-63 245.0 314 48.4
GWHGAORA058848 Cenchrus purpureus HOM05M006070 ORTHO05M007653 1.2e-59 233.4 248 50.4
PH02Gene18851 Phyllostachys edulis HOM05M006070 ORTHO05M007653 1.4e-58 229.9 249 51.4
DDU701G0004 Dioscorea dumetorum HOM05M006070 ORTHO05M007653 4.0e-58 228.4 255 51.8
Cre17.g711050 Chlamydomonas reinhardtii HOM05M006070 ORTHO05M007653 6.6e-53 211.1 292 43.8
Sspon.02G0025870-2C Saccharum spontaneum HOM05M006070 ORTHO05M007653 5.2e-50 201.4 277 45.8
PRCOL_00001916 Prasinoderma coloniale HOM05M006070 ORTHO05M007653 3.6e-43 178.7 323 37.2
Pp3c8_25320 Physcomitrium patens HOM05M006070 ORTHO05M007653 1.4e-42 176.8 141 66.0
p5.00_sc00051_p0117 Elaeis guineensis HOM05M006070 ORTHO05M007653 1.3e-40 170.2 209 45.5
MCO02G221 Micromonas commoda HOM05M006070 ORTHO05M007653 6.4e-40 167.9 172 50.6
CALSI_Maker00017565 Calamus simplicifolius HOM05M006070 ORTHO05M007653 3.0e-37 159.1 154 51.3
Zm00007a00047158 Zea mays B104 HOM05M006070 ORTHO05M007653 2.5e-36 156.0 157 53.5
Zjn_sc00052.1.g00470.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006070 ORTHO05M007653 4.7e-35 151.8 163 49.7
EJB05_28200 Eragrostis curvula HOM05M006070 ORTHO05M007653 1.4e-34 150.2 171 47.4
SEGI_02005 Sequoiadendron giganteum HOM05M006070 ORTHO05M007653 1.5e-33 146.7 111 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05M006070 ORTHO05M007653 1.2e-27 127.1 72 81.9
Pahal.8G136800 Panicum hallii HOM05M006070 ORTHO05M007653 4.3e-20 102.1 92 59.8
Os11g0312340 Oryza sativa ssp. japonica HOM05M006070 ORTHO05M007653 7.3e-20 101.3 86 65.1
HPP92_017676 Vanilla planifolia HOM05M006070 ORTHO05M007653 2.4e-18 96.3 142 46.5
GWHGAZTO063609 Oryza alta HOM05M006070 ORTHO05M007653 3.4e-17 92.4 143 39.9
CALSI_Maker00033051 Calamus simplicifolius HOM05M006070 ORTHO05M007653 5.8e-17 91.7 137 42.3
EJB05_28201 Eragrostis curvula HOM05M006070 ORTHO05M007653 7.1e-15 84.7 80 61.2
SEGI_31918 Sequoiadendron giganteum HOM05M006070 ORTHO05M007653 1.6e-14 83.6 56 60.7
Asa8G00233 Allium sativum HOM05M006070 ORTHO05M007653 7.3e-12 74.7 130 33.8


User provided reference genes

Program Settings