Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0010 Marchantia polymorpha HOM05M004740 ORTHO05M005371 1.3e-279 964.9 467 100.0
SMO196G0059 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 1.4e-137 493.0 432 56.2
Pp3c5_22590 Physcomitrium patens HOM05M004740 ORTHO05M005371 8.0e-128 460.7 495 49.3
SMO137G0068 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 1.4e-127 459.9 448 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05M004740 ORTHO05M005371 2.6e-126 455.7 426 53.5
CBR_g32054 Chara braunii HOM05M004740 ORTHO05M005371 3.7e-125 451.8 454 49.8
Solyc07g066640.3 Solanum lycopersicum HOM05M004740 ORTHO05M005371 5.7e-110 401.4 446 45.5
Potri.010G172300 Populus trichocarpa HOM05M004740 ORTHO05M005371 8.3e-109 397.5 449 43.7
Potri.008G084100 Populus trichocarpa HOM05M004740 ORTHO05M005371 7.7e-107 391.0 449 42.3
AT1G16290 Arabidopsis thaliana HOM05M004740 ORTHO05M005371 5.5e-105 384.8 450 42.7
p5.00_sc00042_p0118 Elaeis guineensis HOM05M004740 ORTHO05M005371 4.7e-104 381.7 444 41.7
Ma09_g31310 Musa acuminata HOM05M004740 ORTHO05M005371 1.5e-102 376.7 444 43.0
Zm00001eb207280 Zea mays B73 HOM05M004740 ORTHO05M005371 8.3e-101 370.9 448 40.6
Horvu_MOREX_6H01G212100 Hordeum vulgare HOM05M004740 ORTHO05M005371 1.1e-100 370.5 449 41.6
Zosma06g19010 Zostera marina HOM05M004740 ORTHO05M005371 1.1e-100 370.5 447 40.3
Sobic.004G056300 Sorghum bicolor HOM05M004740 ORTHO05M005371 4.5e-99 365.2 450 41.1
TraesCS6A03G0382100 Triticum aestivum HOM05M004740 ORTHO05M005371 4.5e-99 365.2 449 41.9
Seita.1G071700 Setaria italica HOM05M004740 ORTHO05M005371 5.9e-99 364.8 446 41.0
Sevir.1G070300 Setaria viridis HOM05M004740 ORTHO05M005371 5.9e-99 364.8 446 41.0
TRIDC6AG022150 Triticum dicoccoides HOM05M004740 ORTHO05M005371 1.0e-98 364.0 449 41.6
GWHGAORA058494 Cenchrus purpureus HOM05M004740 ORTHO05M005371 5.0e-98 361.7 446 40.8
GWHGAORA015494 Cenchrus purpureus HOM05M004740 ORTHO05M005371 8.6e-98 360.9 446 40.6
GWHGASIY031505 Secale cereale HOM05M004740 ORTHO05M005371 1.9e-97 359.8 449 41.2
GWHGASIY031508 Secale cereale HOM05M004740 ORTHO05M005371 1.9e-97 359.8 449 41.2
V3.Lp_chr6_0G4984 Lolium perenne HOM05M004740 ORTHO05M005371 2.5e-97 359.4 448 40.4
OsKitaake02g056500 Oryza sativa Kitaake HOM05M004740 ORTHO05M005371 2.5e-97 359.4 448 41.1
Zm00007a00007131 Zea mays B104 HOM05M004740 ORTHO05M005371 7.3e-97 357.8 440 40.7
Pahal.1G051700 Panicum hallii HOM05M004740 ORTHO05M005371 9.5e-97 357.5 449 41.2
Ot_Chr1_gn31353 Oropetium thomaeum HOM05M004740 ORTHO05M005371 2.1e-96 356.3 444 41.0
PH02Gene09109 Phyllostachys edulis HOM05M004740 ORTHO05M005371 2.1e-96 356.3 448 40.8
TraesCS6B03G0472200 Triticum aestivum HOM05M004740 ORTHO05M005371 2.8e-96 355.9 448 40.6
Bradi3g05286 Brachypodium distachyon HOM05M004740 ORTHO05M005371 3.6e-96 355.5 448 40.6
TRIDC6BG027830 Triticum dicoccoides HOM05M004740 ORTHO05M005371 4.7e-96 355.1 449 40.3
TRITD6Bv1G069790 Triticum turgidum HOM05M004740 ORTHO05M005371 4.7e-96 355.1 449 40.3
Sspon.04G0017370-2C Saccharum spontaneum HOM05M004740 ORTHO05M005371 3.1e-95 352.4 481 39.7
OB02G14700 Oryza brachyantha HOM05M004740 ORTHO05M005371 2.6e-94 349.4 448 40.4
EJB05_24533 Eragrostis curvula HOM05M004740 ORTHO05M005371 1.9e-92 343.2 490 38.0
GWHGAZTO068484 Oryza alta HOM05M004740 ORTHO05M005371 5.4e-92 341.7 436 40.6
EJB05_24513 Eragrostis curvula HOM05M004740 ORTHO05M005371 9.2e-92 340.9 486 37.9
evm.TU.AsparagusV1_06.122.V1.1 Asparagus officinalis HOM05M004740 ORTHO05M005371 1.0e-90 337.4 396 43.7
MBI02_g08257_MAGBIO Magnolia biondii HOM05M004740 ORTHO05M005371 1.1e-89 334.0 370 45.1
SMO170G0006 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 4.3e-89 332.0 400 45.0
TraesCS6D03G0327600 Triticum aestivum HOM05M004740 ORTHO05M005371 7.3e-89 331.3 449 38.5
Aco007468 Ananas comosus HOM05M004740 ORTHO05M005371 2.0e-86 323.2 440 39.8
GWHGAZTO016741 Oryza alta HOM05M004740 ORTHO05M005371 1.1e-84 317.4 398 40.7
Spipo13G0023600 Spirodela polyrhiza HOM05M004740 ORTHO05M005371 7.0e-84 314.7 436 36.7
Sspon.04G0017370-1A Saccharum spontaneum HOM05M004740 ORTHO05M005371 4.6e-83 312.0 456 38.6
Sspon.04G0017370-3D Saccharum spontaneum HOM05M004740 ORTHO05M005371 4.6e-83 312.0 456 38.6
Asa8G01936 Allium sativum HOM05M004740 ORTHO05M005371 3.0e-82 309.3 398 40.5
Glyma.08G165100 Glycine max HOM05M004740 ORTHO05M005371 4.3e-81 305.4 459 37.7
DDU479G0281 Dioscorea dumetorum HOM05M004740 ORTHO05M005371 1.1e-76 290.8 428 37.4
DDU732G0055 Dioscorea dumetorum HOM05M004740 ORTHO05M005371 1.1e-76 290.8 428 37.4
Misin07G054800 Miscanthus sinensis HOM05M004740 ORTHO05M005371 1.3e-74 283.9 361 40.2
AET6Gv20400700 Aegilops tauschii HOM05M004740 ORTHO05M005371 2.8e-72 276.2 361 39.3
OsR498G0203056600.01 Oryza sativa ssp. indica HOM05M004740 ORTHO05M005371 4.6e-67 258.8 342 39.2
Dexi1B01G0005390 Digitaria exilis HOM05M004740 ORTHO05M005371 2.4e-63 246.5 358 38.0
MisinT435700 Miscanthus sinensis HOM05M004740 ORTHO05M005371 7.1e-60 235.0 326 38.7
Aco003685 Ananas comosus HOM05M004740 ORTHO05M005371 6.0e-59 231.9 375 36.0
CALSI_Maker00020432 Calamus simplicifolius HOM05M004740 ORTHO05M005371 1.7e-58 230.3 317 36.6
p5.00_sc00042_p0119 Elaeis guineensis HOM05M004740 ORTHO05M005371 3.5e-51 206.1 191 49.2
TRITD6Av1G061000 Triticum turgidum HOM05M004740 ORTHO05M005371 3.3e-49 199.5 439 30.1
SEGI_07478 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 2.5e-44 183.3 119 71.4
Zosma06g18970 Zostera marina HOM05M004740 ORTHO05M005371 2.5e-41 173.3 185 42.2
HPP92_016685 Vanilla planifolia HOM05M004740 ORTHO05M005371 7.4e-41 171.8 185 42.2
HPP92_016686 Vanilla planifolia HOM05M004740 ORTHO05M005371 6.9e-39 165.2 154 48.1
ATR0752G225 Amborella trichopoda HOM05M004740 ORTHO05M005371 3.9e-34 149.4 119 58.0
ATR0752G040 Amborella trichopoda HOM05M004740 ORTHO05M005371 5.7e-33 145.6 145 46.2
SEGI_07505 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 2.6e-30 136.7 127 49.6
Zjn_sc00045.1.g03210.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M004740 ORTHO05M005371 2.3e-26 123.6 338 27.2
PRCOL_00003152 Prasinoderma coloniale HOM05M004740 ORTHO05M005371 1.1e-23 114.8 173 39.3
CALSI_Maker00020434 Calamus simplicifolius HOM05M004740 ORTHO05M005371 5.3e-23 112.5 121 41.3
PH02Gene02909 Phyllostachys edulis HOM05M004740 ORTHO05M005371 2.6e-22 110.2 142 39.4
PH02Gene17134 Phyllostachys edulis HOM05M004740 ORTHO05M005371 2.6e-22 110.2 142 39.4
PH02Gene02595 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.3e-21 107.8 138 39.9
PH02Gene24951 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.3e-21 107.8 138 39.9
Aco014252 Ananas comosus HOM05M004740 ORTHO05M005371 8.5e-21 105.1 143 39.2
SEGI_02544 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 3.6e-19 99.8 78 57.7
Zm00007a00049910 Zea mays B104 HOM05M004740 ORTHO05M005371 4.8e-16 89.4 150 34.0
Zm00001eb338130 Zea mays B73 HOM05M004740 ORTHO05M005371 2.4e-15 87.0 142 35.2
SEGI_03880 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 5.3e-15 85.9 75 45.3
Dexi1A01G0005690 Digitaria exilis HOM05M004740 ORTHO05M005371 5.9e-14 82.4 79 44.3
Dexi1B01G0005380 Digitaria exilis HOM05M004740 ORTHO05M005371 5.9e-14 82.4 79 44.3
ATR0752G173 Amborella trichopoda HOM05M004740 ORTHO05M005371 1.2e-11 74.7 54 53.7
Zm00001eb249880 Zea mays B73 HOM05M004740 ORTHO05M005371 2.8e-08 63.5 52 50.0
Zm00007a00016123 Zea mays B104 HOM05M000083 ORTHO05M005371 2.8e-08 63.5 52 50.0
Zm00007a00007832 Zea mays B104 HOM05M000083 ORTHO05M009533 4.5e-06 56.2 50 48.0
Zm00007a00014107 Zea mays B104 HOM05M000083 ORTHO05M009533 4.5e-06 56.2 50 48.0
HPP92_016689 Vanilla planifolia HOM05M004740 ORTHO05M005371 5.9e-06 55.8 37 51.4

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (2 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (3 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (4 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings