Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GWHGASIY031036 Secale cereale HOM05M006070 ORTHO05M007653 1.5e-167 592.0 302 100.0
TRITD5Av1G234260 Triticum turgidum HOM05M006070 ORTHO05M007653 1.4e-162 575.5 302 97.0
AET5Gv21116400 Aegilops tauschii HOM05M006070 ORTHO05M007653 2.7e-161 571.2 302 96.4
TraesCS5B03G1206600 Triticum aestivum HOM05M006070 ORTHO05M007653 4.6e-161 570.5 302 96.4
TRIDC5BG074410 Triticum dicoccoides HOM05M006070 ORTHO05M007653 4.6e-161 570.5 302 96.4
TRIDC5AG068950 Triticum dicoccoides HOM05M006070 ORTHO05M007653 6.7e-160 566.6 302 95.7
TraesCS5A03G1135600 Triticum aestivum HOM05M006070 ORTHO05M007653 1.5e-159 565.5 302 96.4
TraesCS5D03G1089100 Triticum aestivum HOM05M006070 ORTHO05M007653 9.6e-159 562.8 302 95.7
Bradi1g03560 Brachypodium distachyon HOM05M006070 ORTHO05M007653 1.8e-152 542.0 302 91.4
Sobic.002G009200 Sorghum bicolor HOM05M006070 ORTHO05M007653 1.1e-151 539.3 302 89.1
Seita.1G037400 Setaria italica HOM05M006070 ORTHO05M007653 3.3e-151 537.7 302 89.1
Sevir.1G036600 Setaria viridis HOM05M006070 ORTHO05M007653 3.3e-151 537.7 302 89.1
Pahal.7G156800 Panicum hallii HOM05M006070 ORTHO05M007653 1.1e-149 532.7 302 88.4
Misin16G076400 Miscanthus sinensis HOM05M006070 ORTHO05M007653 2.4e-149 531.6 302 87.4
Zm00001eb298610 Zea mays B73 HOM05M006070 ORTHO05M007653 6.5e-147 523.5 302 86.1
TRITD5Bv1G233980 Triticum turgidum HOM05M006070 ORTHO05M007653 1.1e-146 522.7 302 91.4
OsR498G1119916600.01 Oryza sativa ssp. indica HOM05M006070 ORTHO05M007653 1.2e-145 519.2 302 86.4
OB0096G10030 Oryza brachyantha HOM05M006070 ORTHO05M007653 5.1e-144 513.8 302 85.4
GWHGAORA015863 Cenchrus purpureus HOM05M006070 ORTHO05M007653 1.6e-137 492.3 314 82.2
EJB05_02255 Eragrostis curvula HOM05M006070 ORTHO05M007653 1.2e-132 476.1 298 82.6
Ma03_g22880 Musa acuminata HOM05M006070 ORTHO05M007653 1.2e-132 476.1 300 79.7
Aco011283 Ananas comosus HOM05M006070 ORTHO05M007653 4.2e-130 467.6 331 74.0
Horvu_MOREX_5H01G680400 Hordeum vulgare HOM05M006070 ORTHO05M007653 7.2e-130 466.8 249 95.6
Seita.9G016000 Setaria italica HOM05M006070 ORTHO05M007653 7.2e-130 466.8 324 75.9
OsKitaake11g113500 Oryza sativa Kitaake HOM05M006070 ORTHO05M007653 4.7e-129 464.2 302 80.1
Misin04G011900 Miscanthus sinensis HOM05M006070 ORTHO05M007653 5.3e-125 450.7 250 89.2
Glyma.07G070800 Glycine max HOM05M006070 ORTHO05M007653 5.5e-122 440.7 300 72.0
GWHGAORA015256 Cenchrus purpureus HOM05M006070 ORTHO05M007653 2.3e-120 435.3 249 87.6
Dexi2B01G0036390 Digitaria exilis HOM05M006070 ORTHO05M007653 1.3e-118 429.5 249 86.3
Potri.008G094600 Populus trichocarpa HOM05M006070 ORTHO05M007653 1.1e-117 426.4 300 71.3
GWHGAZTO011482 Oryza alta HOM05M006070 ORTHO05M007653 1.8e-117 425.6 249 85.9
MBI03_g07691_MAGBIO Magnolia biondii HOM05M006070 ORTHO05M007653 4.1e-117 424.5 311 70.4
V3.Lp_chr4_0G2400 Lolium perenne HOM05M006070 ORTHO05M007653 2.6e-116 421.8 230 93.0
HPP92_017746 Vanilla planifolia HOM05M006070 ORTHO05M007653 1.3e-115 419.5 300 70.7
Dexi2A01G0037380 Digitaria exilis HOM05M006070 ORTHO05M007653 1.7e-115 419.1 265 81.1
AT1G13870 Arabidopsis thaliana HOM05M006070 ORTHO05M007653 1.4e-112 409.5 301 67.4
PH02Gene18851 Phyllostachys edulis HOM05M006070 ORTHO05M007653 9.8e-103 376.7 249 80.3
Solyc08g008250.3 Solanum lycopersicum HOM05M006070 ORTHO05M007653 1.3e-102 376.3 248 74.2
Sspon.02G0025870-2C Saccharum spontaneum HOM05M006070 ORTHO05M007653 2.7e-100 368.6 302 68.5
Asa3G02490 Allium sativum HOM05M006070 ORTHO05M007653 8.6e-99 363.6 253 73.9
Spipo14G0036900 Spirodela polyrhiza HOM05M006070 ORTHO05M007653 1.5e-98 362.8 249 73.5
Pp3c10_170 Physcomitrium patens HOM05M006070 ORTHO05M007653 7.2e-98 360.5 300 62.7
DDU879G0562 Dioscorea dumetorum HOM05M006070 ORTHO05M007653 9.5e-98 360.1 331 59.5
GWHGAORA058848 Cenchrus purpureus HOM05M006070 ORTHO05M007653 1.4e-96 356.3 249 75.1
SMO115G0347 Selaginella moellendorffii HOM05M006070 ORTHO05M007653 3.0e-96 355.1 305 60.3
Zosma04g16310 Zostera marina HOM05M006070 ORTHO05M007653 2.7e-92 342.0 251 66.9
CDE04G1019 Ceratophyllum demersum HOM05M006070 ORTHO05M007653 9.5e-90 333.6 249 65.1
ATR1136G145 Amborella trichopoda HOM05M006070 ORTHO05M007653 2.1e-89 332.4 255 65.9
Mapoly0008s0061 Marchantia polymorpha HOM05M006070 ORTHO05M007653 9.8e-87 323.6 277 61.0
evm.TU.AsparagusV1_10.1133.V1.1 Asparagus officinalis HOM05M006070 ORTHO05M007653 1.3e-83 313.2 199 76.9
CBR_g32247 Chara braunii HOM05M006070 ORTHO05M007653 8.6e-83 310.5 339 51.9
DDU701G0004 Dioscorea dumetorum HOM05M006070 ORTHO05M007653 1.2e-79 300.1 265 60.8
Zjn_sc00052.1.g00470.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006070 ORTHO05M007653 5.8e-79 297.7 192 81.2
p5.00_sc00051_p0117 Elaeis guineensis HOM05M006070 ORTHO05M007653 1.5e-66 256.5 209 66.5
EJB05_28200 Eragrostis curvula HOM05M006070 ORTHO05M007653 4.7e-65 251.5 171 76.6
CALSI_Maker00017565 Calamus simplicifolius HOM05M006070 ORTHO05M007653 1.6e-60 236.5 154 75.3
Zm00007a00047158 Zea mays B104 HOM05M006070 ORTHO05M007653 2.3e-59 232.6 162 73.5
Cre17.g711050 Chlamydomonas reinhardtii HOM05M006070 ORTHO05M007653 3.0e-59 232.3 319 43.3
GWHGAZTO063609 Oryza alta HOM05M006070 ORTHO05M007653 3.9e-51 205.3 168 67.3
CALSI_Maker00033051 Calamus simplicifolius HOM05M006070 ORTHO05M007653 6.9e-48 194.5 160 66.2
Pp3c8_25320 Physcomitrium patens HOM05M006070 ORTHO05M007653 9.9e-47 190.7 163 60.7
PRCOL_00001916 Prasinoderma coloniale HOM05M006070 ORTHO05M007653 1.4e-40 170.2 343 35.6
MCO02G221 Micromonas commoda HOM05M006070 ORTHO05M007653 7.6e-39 164.5 177 50.8
SEGI_02005 Sequoiadendron giganteum HOM05M006070 ORTHO05M007653 4.9e-38 161.8 112 75.0
Os11g0312340 Oryza sativa ssp. japonica HOM05M006070 ORTHO05M007653 3.7e-33 145.6 86 87.2
Pahal.8G136800 Panicum hallii HOM05M006070 ORTHO05M007653 8.2e-33 144.4 92 80.4
EJB05_28201 Eragrostis curvula HOM05M006070 ORTHO05M007653 1.0e-27 127.5 80 85.0
Asa8G00233 Allium sativum HOM05M006070 ORTHO05M007653 1.5e-26 123.6 131 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05M006070 ORTHO05M007653 1.2e-23 114.0 72 72.2
Zm00007a00033970 Zea mays B104 HOM05M006070 ORTHO05M007653 1.5e-23 113.6 100 63.0
HPP92_017676 Vanilla planifolia HOM05M006070 ORTHO05M007653 5.0e-22 108.6 138 47.1
SEGI_31918 Sequoiadendron giganteum HOM05M006070 ORTHO05M007653 5.0e-14 82.0 66 54.5
Glyma.03G009300 Glycine max HOM05M006070 ORTHO05M007653 1.1e-10 70.9 43 72.1


User provided reference genes

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