Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
EJB05_46877 Eragrostis curvula HOM05M006046 ORTHO05M007420 9.1e-192 672.5 319 100.0
Sevir.7G032200 Setaria viridis HOM05M006046 ORTHO05M007420 1.4e-176 622.1 321 90.7
GWHGAORA029911 Cenchrus purpureus HOM05M006046 ORTHO05M007420 3.5e-175 617.5 321 90.0
Seita.7G006400 Setaria italica HOM05M006046 ORTHO05M007420 3.5e-175 617.5 321 90.0
Sspon.05G0015320-4D Saccharum spontaneum HOM05M006046 ORTHO05M007420 1.0e-174 615.9 321 90.3
Dexi7B01G0000390 Digitaria exilis HOM05M006046 ORTHO05M007420 1.3e-174 615.5 321 90.0
Sspon.05G0015320-3C Saccharum spontaneum HOM05M006046 ORTHO05M007420 1.3e-174 615.5 321 90.0
Dexi6A01G0010520 Digitaria exilis HOM05M006046 ORTHO05M007420 6.6e-174 613.2 321 90.0
Sobic.006G003100 Sorghum bicolor HOM05M006046 ORTHO05M007420 4.2e-173 610.5 321 89.7
Misin11G004600 Miscanthus sinensis HOM05M006046 ORTHO05M007420 8.0e-172 606.3 321 89.7
Misin12G003900 Miscanthus sinensis HOM05M006046 ORTHO05M007420 1.0e-171 605.9 321 89.7
Pahal.7G007000 Panicum hallii HOM05M006046 ORTHO05M007420 2.3e-171 604.7 321 87.9
Ot_Chr6_g23795 Oropetium thomaeum HOM05M006046 ORTHO05M007420 1.0e-166 589.3 321 85.0
Zjn_sc00101.1.g00260.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M006046 ORTHO05M007420 1.7e-166 588.6 354 78.8
Zm00007a00027040 Zea mays B104 HOM05M006046 ORTHO05M007420 8.0e-164 579.7 352 79.3
PH02Gene39243 Phyllostachys edulis HOM05M006046 ORTHO05M007420 5.2e-163 577.0 321 83.2
Sspon.05G0015320-1A Saccharum spontaneum HOM05M006046 ORTHO05M007420 1.2e-162 575.9 302 89.4
Bradi5g02270 Brachypodium distachyon HOM05M006046 ORTHO05M007420 1.5e-162 575.5 321 83.2
Horvu_MOREX_2H01G035700 Hordeum vulgare HOM05M006046 ORTHO05M007420 2.9e-161 571.2 317 83.3
AET2Gv20059700 Aegilops tauschii HOM05M006046 ORTHO05M007420 4.9e-161 570.5 324 81.8
TraesCS2D03G0068400 Triticum aestivum HOM05M006046 ORTHO05M007420 1.4e-160 568.9 324 81.5
TraesCS2B03G0107600 Triticum aestivum HOM05M006046 ORTHO05M007420 7.0e-160 566.6 321 82.2
TraesCS2A03G0073200 Triticum aestivum HOM05M006046 ORTHO05M007420 1.2e-159 565.8 320 82.5
GWHGASIY041802 Secale cereale HOM05M006046 ORTHO05M007420 4.6e-159 563.9 324 80.9
GWHGAZTO027760 Oryza alta HOM05M006046 ORTHO05M007420 1.0e-158 562.8 320 81.2
OsR498G0407428300.01 Oryza sativa ssp. indica HOM05M006046 ORTHO05M007420 1.5e-157 558.9 313 81.2
V3.Lp_chr2_0G1746 Lolium perenne HOM05M006046 ORTHO05M007420 4.3e-157 557.4 321 80.1
OsKitaake04g002300 Oryza sativa Kitaake HOM05M006046 ORTHO05M007420 1.6e-156 555.4 313 80.8
Zm00001eb418850 Zea mays B73 HOM05M006046 ORTHO05M007420 4.7e-156 553.9 322 82.0
Sspon.05G0027880-1B Saccharum spontaneum HOM05M006046 ORTHO05M007420 1.1e-147 526.2 323 80.2
GWHGAZTO077625 Oryza alta HOM05M006046 ORTHO05M007420 1.5e-146 522.3 273 85.7
Sspon.05G0015320-2B Saccharum spontaneum HOM05M006046 ORTHO05M007420 3.1e-139 498.0 321 78.2
Ma04_g20810 Musa acuminata HOM05M006046 ORTHO05M007420 2.2e-137 491.9 325 68.0
TRIDC2AG004040 Triticum dicoccoides HOM05M006046 ORTHO05M007420 8.4e-137 490.0 264 84.5
Aco014077 Ananas comosus HOM05M006046 ORTHO05M007420 9.2e-136 486.5 316 69.9
CALSI_Maker00004177 Calamus simplicifolius HOM05M006046 ORTHO05M007420 4.6e-135 484.2 327 67.3
p5.00_sc00508_p0014 Elaeis guineensis HOM05M006046 ORTHO05M007420 5.1e-134 480.7 328 65.5
DDU273G0268 Dioscorea dumetorum HOM05M006046 ORTHO05M007420 6.6e-134 480.3 325 66.5
DDU159G0005 Dioscorea dumetorum HOM05M006046 ORTHO05M007420 1.9e-133 478.8 325 66.2
AT2G46890 Arabidopsis thaliana HOM05M006046 ORTHO05M007420 1.6e-132 475.7 320 64.7
p5.00_sc00002_p0482 Elaeis guineensis HOM05M006046 ORTHO05M007420 2.1e-132 475.3 319 67.4
Spipo1G0107700 Spirodela polyrhiza HOM05M006046 ORTHO05M007420 1.7e-129 465.7 322 66.5
Solyc02g063390.4 Solanum lycopersicum HOM05M006046 ORTHO05M007420 8.4e-129 463.4 315 64.8
Potri.014G109200 Populus trichocarpa HOM05M006046 ORTHO05M007420 2.4e-128 461.8 322 65.2
Asa5G00648 Allium sativum HOM05M006046 ORTHO05M007420 3.2e-128 461.5 315 64.4
MBI04_g26123_MAGBIO Magnolia biondii HOM05M006046 ORTHO05M007420 3.5e-127 458.0 322 64.0
Glyma.07G047400 Glycine max HOM05M006046 ORTHO05M007420 9.6e-125 449.9 324 63.3
Glyma.16G015900 Glycine max HOM05M006046 ORTHO05M007420 4.8e-124 447.6 325 63.7
MBI12_g26903_MAGBIO Magnolia biondii HOM05M006046 ORTHO05M007420 4.8e-124 447.6 321 61.1
TRIDC2BG004630 Triticum dicoccoides HOM05M006046 ORTHO05M007420 9.0e-123 443.4 237 84.8
HPP92_007371 Vanilla planifolia HOM05M006046 ORTHO05M007420 2.4e-115 418.7 323 59.4
Glyma.19G261600 Glycine max HOM05M006046 ORTHO05M007420 9.9e-114 413.3 318 59.1
ATR0579G058 Amborella trichopoda HOM05M006046 ORTHO05M007420 6.4e-113 410.6 314 57.6
Solyc01g005320.2 Solanum lycopersicum HOM05M006046 ORTHO05M007420 3.2e-112 408.3 305 57.7
Pp3c5_6630 Physcomitrium patens HOM05M006046 ORTHO05M007420 5.3e-107 391.0 313 54.6
CDE04G1489 Ceratophyllum demersum HOM05M006046 ORTHO05M007420 6.9e-107 390.6 248 68.1
Mapoly0004s0057 Marchantia polymorpha HOM05M006046 ORTHO05M007420 1.3e-102 376.3 316 54.1
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05M006046 ORTHO05M007420 5.1e-102 374.4 306 55.2
Zosma01g08730 Zostera marina HOM05M006046 ORTHO05M007420 2.0e-98 362.5 239 65.7
SMO331G0060 Selaginella moellendorffii HOM05M006046 ORTHO05M007420 2.2e-92 342.4 315 52.4
CBR_g3145 Chara braunii HOM05M006046 ORTHO05M007420 1.2e-87 326.6 282 51.4
OB04G10360 Oryza brachyantha HOM05M006046 ORTHO05M007420 7.9e-87 323.9 181 77.9
CALSI_Maker00024983 Calamus simplicifolius HOM05M006046 ORTHO05M007420 5.5e-80 301.2 178 72.5
Cre07.g325450 Chlamydomonas reinhardtii HOM05M006046 ORTHO05M007420 2.8e-68 262.3 278 44.2
evm.TU.AsparagusV1_10.176.V1.1 Asparagus officinalis HOM05M006046 ORTHO05M007420 2.4e-59 232.6 149 66.4
SEGI_12121 Sequoiadendron giganteum HOM05M006046 ORTHO05M007420 1.6e-50 203.4 158 58.2
PH02Gene39770 Phyllostachys edulis HOM05M006046 ORTHO05M007420 7.8e-34 147.9 129 59.7
OB04G10350 Oryza brachyantha HOM05M006046 ORTHO05M007420 1.1e-32 144.1 104 64.4
Os04g0105300 Oryza sativa ssp. japonica HOM05M006046 ORTHO05M007420 2.1e-18 96.7 72 62.5
Sspon.01G0046910-1B Saccharum spontaneum HOM05M005328 ORTHO05M006892 3.4e-13 79.3 212 30.2
Seita.9G122000 Setaria italica HOM05M005328 ORTHO05M006892 3.4e-13 79.3 212 31.1
Sevir.9G120600 Setaria viridis HOM05M005328 ORTHO05M006892 3.4e-13 79.3 212 31.1
Sobic.001G120100 Sorghum bicolor HOM05M005328 ORTHO05M006892 3.4e-13 79.3 212 31.1
PRCOL_00003147 Prasinoderma coloniale HOM05M006046 ORTHO05M007420 4.4e-13 79.0 279 25.4
GWHGASIY018347 Secale cereale HOM05M005328 ORTHO05M006892 4.4e-13 79.0 220 30.9
Bradi1g11150 Brachypodium distachyon HOM05M005328 ORTHO05M006892 5.8e-13 78.6 212 31.6
AT1G18180 Arabidopsis thaliana HOM05M005328 ORTHO05M006892 9.9e-13 77.8 211 32.2
Misin01G110800 Miscanthus sinensis HOM05M005328 ORTHO05M006892 9.9e-13 77.8 212 30.2
PH02Gene09940 Phyllostachys edulis HOM05M005328 ORTHO05M006892 9.9e-13 77.8 212 29.7
Horvu_MOREX_4H01G043900 Hordeum vulgare HOM05M005328 ORTHO05M006892 1.3e-12 77.4 210 31.0
TraesCS4A03G0700300 Triticum aestivum HOM05M005328 ORTHO05M006892 1.7e-12 77.0 212 30.7
TraesCS4B03G0095000 Triticum aestivum HOM05M005328 ORTHO05M006892 2.2e-12 76.6 210 30.5
TRIDC4BG006830 Triticum dicoccoides HOM05M005328 ORTHO05M006892 2.2e-12 76.6 210 30.5
Glyma.08G053000 Glycine max HOM05M005328 ORTHO05M006892 2.9e-12 76.3 210 28.6
V3.Lp_chr4_0G7178 Lolium perenne HOM05M005328 ORTHO05M006892 2.9e-12 76.3 213 31.5
Misin02G098000 Miscanthus sinensis HOM05M005328 ORTHO05M006892 2.9e-12 76.3 212 30.2
AET4Gv20081800 Aegilops tauschii HOM05M005328 ORTHO05M006892 3.8e-12 75.9 210 30.5
TraesCS4D03G0068900 Triticum aestivum HOM05M005328 ORTHO05M006892 3.8e-12 75.9 210 30.5
Spipo20G0017800 Spirodela polyrhiza HOM05M005328 ORTHO05M006892 6.4e-12 75.1 212 30.7
Zosma03g16930 Zostera marina HOM05M005328 ORTHO05M006892 6.4e-12 75.1 213 29.1
GWHGAORA051280 Cenchrus purpureus HOM05M005328 ORTHO05M006892 8.4e-12 74.7 212 29.7
Asa2G00241 Allium sativum HOM05M005328 ORTHO05M006892 1.1e-11 74.3 212 30.2
GWHGAORA019346 Cenchrus purpureus HOM05M005328 ORTHO05M006892 1.1e-11 74.3 212 29.7
EJB05_04946 Eragrostis curvula HOM05M005328 ORTHO05M006892 1.1e-11 74.3 212 28.8
Pp3c13_4300 Physcomitrium patens HOM05M005328 ORTHO05M006892 1.1e-11 74.3 213 30.0
Sspon.01G0046910-2C Saccharum spontaneum HOM05M005328 ORTHO05M006892 1.4e-11 73.9 213 29.6
Asa8G06200 Allium sativum HOM05M006046 ORTHO05M007420 1.9e-11 73.6 58 55.2
CDE06G1767 Ceratophyllum demersum HOM05M005328 ORTHO05M006892 1.9e-11 73.6 212 31.1
Dexi9A01G0011700 Digitaria exilis HOM05M005328 ORTHO05M006892 1.9e-11 73.6 212 30.2
Solyc03g118830.3 Solanum lycopersicum HOM05M005328 ORTHO05M006892 1.9e-11 73.6 208 30.3
Glyma.05G245000 Glycine max HOM05M005328 ORTHO05M006892 2.4e-11 73.2 207 29.5
Zm00001eb216550 Zea mays B73 HOM05M005328 ORTHO05M006892 2.4e-11 73.2 212 29.7
Zm00007a00024247 Zea mays B104 HOM05M005328 ORTHO05M006892 2.4e-11 73.2 212 29.7
Pahal.9G119700 Panicum hallii HOM05M005328 ORTHO05M006892 3.2e-11 72.8 212 29.2
ATR1102G012 Amborella trichopoda HOM05M005328 ORTHO05M006892 4.2e-11 72.4 212 28.8
Ma07_g11680 Musa acuminata HOM05M005328 ORTHO05M006892 5.4e-11 72.0 212 30.7
OB03G38450 Oryza brachyantha HOM05M005328 ORTHO05M006892 5.4e-11 72.0 212 30.2
TRITD4Av1G193930 Triticum turgidum HOM05M005328 ORTHO05M006892 5.4e-11 72.0 207 30.0
GWHGAZTO076195 Oryza alta HOM05M005328 ORTHO05M006892 7.1e-11 71.6 212 29.7
TRITD4Bv1G012610 Triticum turgidum HOM05M005328 ORTHO05M006892 7.1e-11 71.6 205 29.8
MCO04G469 Micromonas commoda HOM05M006046 ORTHO05M007420 9.3e-11 71.2 196 29.1
OsKitaake03g309300 Oryza sativa Kitaake HOM05M005328 ORTHO05M006892 9.3e-11 71.2 212 30.7
OsR498G0306904700.01 Oryza sativa ssp. indica HOM05M005328 ORTHO05M006892 9.3e-11 71.2 212 30.7
Os03g0708400 Oryza sativa ssp. japonica HOM05M005328 ORTHO05M006892 9.3e-11 71.2 212 30.7
p5.00_sc00001_p0824 Elaeis guineensis HOM05M005328 ORTHO05M006892 1.2e-10 70.9 212 29.7
AagrBONN_evm.TU.Sc2ySwM_368.3263 Anthoceros agrestis HOM05M005328 ORTHO05M006892 1.6e-10 70.5 214 29.4
Aco019846 Ananas comosus HOM05M005328 ORTHO05M006892 2.1e-10 70.1 181 30.4
AT1G73650 Arabidopsis thaliana HOM05M005328 ORTHO05M006892 3.5e-10 69.3 208 29.8
CALSI_Maker00041444 Calamus simplicifolius HOM05M005328 ORTHO05M006892 6.0e-10 68.6 181 30.9
Cre09.g401701 Chlamydomonas reinhardtii HOM05M005328 ORTHO05M006892 6.0e-10 68.6 272 27.9
Mapoly0098s0041 Marchantia polymorpha HOM05M005328 ORTHO05M006892 7.9e-10 68.2 213 28.6
Potri.015G039900 Populus trichocarpa HOM05M005328 ORTHO05M006892 7.9e-10 68.2 213 30.5
CBR_g19480 Chara braunii HOM05M005328 ORTHO05M006892 2.3e-09 66.6 213 27.2
PH02Gene37701 Phyllostachys edulis HOM05M005328 ORTHO05M006892 2.3e-09 66.6 272 26.5
Ot_Chr4_g08049 Oropetium thomaeum HOM05M005328 ORTHO05M006892 3.9e-09 65.9 212 27.4
TRIDC4AG042130 Triticum dicoccoides HOM05M005328 ORTHO05M006892 6.6e-09 65.1 181 29.8
Mapoly0088s0079 Marchantia polymorpha HOM05M005328 ORTHO05M006892 8.7e-09 64.7 228 28.1
HPP92_004161 Vanilla planifolia HOM05M005328 ORTHO05M006892 8.7e-09 64.7 213 29.6
CBR_g30737 Chara braunii HOM05M005328 ORTHO05M006892 4.3e-08 62.4 179 27.9
ATR1102G014 Amborella trichopoda HOM05M005328 ORTHO05M006892 7.3e-08 61.6 184 28.8
Mapoly0024s0109 Marchantia polymorpha HOM05M005328 ORTHO05M006892 7.3e-08 61.6 219 29.7
Solyc06g068970.3 Solanum lycopersicum HOM05M005328 ORTHO05M006892 2.1e-07 60.1 208 27.9
GWHGAZTO026253 Oryza alta HOM05M005328 ORTHO05M006892 1.1e-06 57.8 153 30.7
Asa4G00938 Allium sativum HOM05M002147 ORTHO05M007420 2.4e-06 56.6 36 63.9
p5.00_sc00031_p0152 Elaeis guineensis HOM05M005328 ORTHO05M006892 4.0e-06 55.8 82 39.0
SEGI_28538 Sequoiadendron giganteum HOM05M005328 ORTHO05M006892 5.3e-06 55.5 209 26.3
MCO11G174 Micromonas commoda HOM05M005328 ORTHO05M006892 9.0e-06 54.7 233 27.0

Aegilops tauschii (2 genes)
Allium sativum (4 genes)
Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (3 genes)
Chlamydomonas reinhardtii (2 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (4 genes)
Eragrostis curvula (2 genes)
Glycine max (5 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (4 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (3 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (7 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (2 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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