Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EJB05_46810 Eragrostis curvula HOM05M000112 ORTHO05M000553 4.0e-44 180.3 90 100.0
EJB05_19159 Eragrostis curvula HOM05M000112 ORTHO05M000553 9.8e-43 175.6 91 98.9
Ot_Chr1_g04677 Oropetium thomaeum HOM05M000112 ORTHO05M000553 7.8e-32 139.4 92 80.4
Pahal.1G451300 Panicum hallii HOM05M000112 ORTHO05M000553 4.3e-22 107.1 97 67.0
Seita.1G369600 Setaria italica HOM05M000112 ORTHO05M000553 4.5e-19 97.1 99 62.6
Sevir.1G376200 Setaria viridis HOM05M000112 ORTHO05M000553 4.5e-19 97.1 99 62.6
OB02G44330 Oryza brachyantha HOM05M000112 ORTHO05M000553 2.2e-18 94.7 101 64.4
Zjn_sc00066.1.g00640.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M000112 ORTHO05M000553 2.2e-18 94.7 95 65.3
GWHGAORA061150 Cenchrus purpureus HOM05M000112 ORTHO05M000553 2.9e-18 94.4 94 62.8
PH02Gene10926 Phyllostachys edulis HOM05M000112 ORTHO05M000553 8.4e-18 92.8 102 55.9
Sspon.04G0000400-1A Saccharum spontaneum HOM05M000112 ORTHO05M000553 8.4e-18 92.8 100 64.0
Sspon.04G0000400-2C Saccharum spontaneum HOM05M000112 ORTHO05M000553 2.4e-17 91.3 101 63.4
Misin08G332400 Miscanthus sinensis HOM05M000112 ORTHO05M000553 5.4e-17 90.1 99 61.6
Zm00007a00036068 Zea mays B104 HOM05M000112 ORTHO05M000553 5.4e-17 90.1 103 58.3
Misin07G545800 Miscanthus sinensis HOM05M000112 ORTHO05M000553 2.1e-16 88.2 101 59.4
PH02Gene16270 Phyllostachys edulis HOM05M000112 ORTHO05M000553 2.1e-16 88.2 103 53.4
Sobic.004G348800 Sorghum bicolor HOM05M000112 ORTHO05M000553 3.5e-16 87.4 98 62.2
Zm00001eb191170 Zea mays B73 HOM05M000112 ORTHO05M000553 3.5e-16 87.4 103 56.3
Dexi1B01G0030700 Digitaria exilis HOM05M000112 ORTHO05M000553 6.0e-16 86.7 96 60.4
Dexi1A01G0031720 Digitaria exilis HOM05M000112 ORTHO05M000553 5.1e-15 83.6 103 57.3
GWHGAZTO021475 Oryza alta HOM05M000112 ORTHO05M000553 8.7e-15 82.8 105 60.0
GWHGAZTO073084 Oryza alta HOM05M000112 ORTHO05M000553 1.1e-14 82.4 109 59.6
Sspon.04G0000400-3D Saccharum spontaneum HOM05M000112 ORTHO05M000553 1.5e-14 82.0 100 59.0
Horvu_MOREX_6H01G583800 Hordeum vulgare HOM05M000112 ORTHO05M000553 1.9e-14 81.6 102 55.9
Bradi3g55680 Brachypodium distachyon HOM05M000112 ORTHO05M000553 2.5e-14 81.3 100 54.0
TraesCS6B03G1226800 Triticum aestivum HOM05M000112 ORTHO05M000553 2.5e-14 81.3 103 55.3
TRIDC6BG069150 Triticum dicoccoides HOM05M000112 ORTHO05M000553 4.3e-14 80.5 103 55.3
TRITD6Bv1G221890 Triticum turgidum HOM05M000112 ORTHO05M000553 4.3e-14 80.5 103 55.3
GWHGASIY034318 Secale cereale HOM05M000112 ORTHO05M000553 5.6e-14 80.1 101 59.4
AET6Gv20965900 Aegilops tauschii HOM05M000112 ORTHO05M000553 1.3e-13 79.0 100 56.0
TraesCS6D03G0881300 Triticum aestivum HOM05M000112 ORTHO05M000553 1.3e-13 79.0 100 56.0
TRIDC6AG058590 Triticum dicoccoides HOM05M000112 ORTHO05M000553 3.7e-13 77.4 100 55.0
TRITD6Av1G221270 Triticum turgidum HOM05M000112 ORTHO05M000553 3.7e-13 77.4 100 55.0
OsKitaake02g386600 Oryza sativa Kitaake HOM05M000112 ORTHO05M000553 4.8e-13 77.0 106 56.6
OsR498G0205021200.01 Oryza sativa ssp. indica HOM05M000112 ORTHO05M000553 4.8e-13 77.0 106 56.6
Os02g0820500 Oryza sativa ssp. japonica HOM05M000112 ORTHO05M000553 4.8e-13 77.0 106 56.6
TraesCS6A03G1000300 Triticum aestivum HOM05M000112 ORTHO05M000553 4.8e-13 77.0 101 54.5
V3.Lp_chr6_0G19246 Lolium perenne HOM05M000112 ORTHO05M000553 8.4e-10 66.2 93 48.4


User provided reference genes

Program Settings