Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EJB05_32016 Eragrostis curvula HOM05M001637 ORTHO05M007669 5.0e-64 246.9 130 100.0
EJB05_56529 Eragrostis curvula HOM05M001637 ORTHO05M007669 5.0e-64 246.9 130 100.0
Zjn_sc00043.1.g01260.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M001637 ORTHO05M007669 1.3e-51 205.7 132 86.4
Ot_Chr3_g06842 Oropetium thomaeum HOM05M001637 ORTHO05M007669 3.2e-50 201.1 132 81.1
Zjn_sc00005.1.g08390.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001637 ORTHO05M007669 4.3e-47 190.7 132 80.3
Sobic.003G107300 Sorghum bicolor HOM05M001637 ORTHO05M007669 1.2e-44 182.6 128 75.8
Sspon.03G0018130-1P Saccharum spontaneum HOM05M001637 ORTHO05M007669 2.6e-44 181.4 128 74.2
Sspon.03G0018130-3C Saccharum spontaneum HOM05M001637 ORTHO05M007669 2.6e-44 181.4 128 74.2
Sspon.03G0018130-2B Saccharum spontaneum HOM05M001637 ORTHO05M007669 7.5e-44 179.9 128 73.4
Misin05G093600 Miscanthus sinensis HOM05M001637 ORTHO05M007669 1.7e-43 178.7 128 75.0
MisinT109400 Miscanthus sinensis HOM05M001637 ORTHO05M007669 1.7e-43 178.7 128 74.2
Pahal.5G439000 Panicum hallii HOM05M001637 ORTHO05M007669 1.7e-43 178.7 131 77.9
Zm00007a00009952 Zea mays B104 HOM05M001637 ORTHO05M002960 1.0e-40 169.5 128 72.7
Seita.5G067800 Setaria italica HOM05M001637 ORTHO05M007669 3.0e-40 167.9 128 71.9
Sevir.5G066700 Setaria viridis HOM05M001637 ORTHO05M007669 3.9e-40 167.5 128 71.1
PH02Gene19629 Phyllostachys edulis HOM05M001637 ORTHO05M007669 9.5e-39 162.9 130 70.0
Sspon.03G0018130-1A Saccharum spontaneum HOM05M001637 ORTHO05M007669 9.5e-39 162.9 117 71.8
GWHGAORA033226 Cenchrus purpureus HOM05M001637 ORTHO05M007669 4.7e-38 160.6 127 68.5
GWHGAORA041745 Cenchrus purpureus HOM05M001637 ORTHO05M002960 3.1e-37 157.9 127 66.9
Sspon.03G0018120-2B Saccharum spontaneum HOM05M001637 ORTHO05M002960 3.0e-32 141.4 120 63.3
OB01G10220 Oryza brachyantha HOM05M001637 ORTHO05M007669 2.5e-31 138.3 131 59.5
Os01g0102900 Oryza sativa ssp. japonica HOM05M001637 ORTHO05M007669 5.6e-31 137.1 132 62.1
TRITD3Bv1G027360 Triticum turgidum HOM05M001637 ORTHO05M007669 5.6e-31 137.1 125 63.2
Zm00001eb127000 Zea mays B73 HOM05M001637 ORTHO05M007669 7.3e-31 136.7 111 70.3
TraesCS3B03G0222000 Triticum aestivum HOM05M001637 ORTHO05M007669 1.2e-30 136.0 125 62.4
TRIDC3BG013430 Triticum dicoccoides HOM05M001637 ORTHO05M007669 1.2e-30 136.0 125 62.4
TraesCS3D03G0160200 Triticum aestivum HOM05M001637 ORTHO05M007669 2.1e-30 135.2 125 62.4
OsR498G0100012800.01 Oryza sativa ssp. indica HOM05M001637 ORTHO05M007669 2.8e-30 134.8 132 61.4
GWHGASIY033685 Secale cereale HOM05M001637 ORTHO05M007669 9.9e-28 126.3 124 58.9
TRITD3Av1G023320 Triticum turgidum HOM05M001637 ORTHO05M007669 1.7e-27 125.6 125 59.2
GWHGAZTO052923 Oryza alta HOM05M001637 ORTHO05M007669 4.9e-27 124.0 131 58.8
V3.Lp_chr2_0G8196 Lolium perenne HOM05M001637 ORTHO05M007669 6.4e-27 123.6 132 58.3
Horvu_MOREX_3H01G087900 Hordeum vulgare HOM05M001637 ORTHO05M007669 1.1e-26 122.9 124 57.3
TRITD3Bv1G027400 Triticum turgidum HOM05M001637 ORTHO05M007669 3.2e-26 121.3 130 55.4
V3.Lp_chr5_0G10978 Lolium perenne HOM05M001637 ORTHO05M007669 4.2e-26 120.9 133 57.1
Ma02_g07740 Musa acuminata HOM05M001637 ORTHO05M007669 1.6e-25 119.0 92 59.8
Bradi2g03610 Brachypodium distachyon HOM05M001637 ORTHO05M007669 2.1e-25 118.6 135 54.8
p5.00_sc00057_p0070 Elaeis guineensis HOM05M001637 ORTHO05M007669 1.0e-24 116.3 132 51.5
TraesCS3A03G0180600 Triticum aestivum HOM05M001637 ORTHO05M007669 1.0e-24 116.3 142 52.1
Ma06_g30390 Musa acuminata HOM05M001637 ORTHO05M007669 1.3e-24 115.9 131 55.0
Spipo9G0056600 Spirodela polyrhiza HOM05M001637 ORTHO05M007669 3.0e-24 114.8 129 52.7
CALSI_Maker00039939 Calamus simplicifolius HOM05M001637 ORTHO05M007669 1.6e-22 109.0 130 50.0
V3.Lp_chr2_0G19586 Lolium perenne HOM05M001637 ORTHO05M002960 1.6e-22 109.0 85 67.1
Zm00001eb138400 Zea mays B73 HOM05M000330 ORTHO05M007669 2.1e-22 108.6 91 61.5
Zm00007a00027870 Zea mays B104 HOM05M000330 ORTHO05M007669 2.1e-22 108.6 91 61.5
CDE02G3326 Ceratophyllum demersum HOM05M001637 ORTHO05M007669 8.1e-22 106.7 113 53.1
CALSI_Maker00006249 Calamus simplicifolius HOM05M001637 ORTHO05M007669 2.4e-21 105.1 128 50.0
OsKitaake01g002400 Oryza sativa Kitaake HOM05M001637 ORTHO05M007669 2.4e-21 105.1 113 59.3
Zm00001eb182180 Zea mays B73 HOM05M001637 ORTHO05M007669 4.0e-21 104.4 90 60.0
Zm00007a00014154 Zea mays B104 HOM05M001637 ORTHO05M007669 4.0e-21 104.4 90 60.0
CDE06G0025 Ceratophyllum demersum HOM05M001637 ORTHO05M007669 5.3e-21 104.0 128 50.8
MBI07_g07335_MAGBIO Magnolia biondii HOM05M001637 ORTHO05M007669 6.9e-21 103.6 132 48.5
Glyma.16G049000 Glycine max HOM05M001637 ORTHO05M007669 9.0e-21 103.2 128 50.0
Potri.001G066400 Populus trichocarpa HOM05M001637 ORTHO05M007669 1.2e-20 102.8 115 48.7
p5.00_sc00180_p0001 Elaeis guineensis HOM05M001637 ORTHO05M007669 1.5e-20 102.4 126 50.8
ATR0582G340 Amborella trichopoda HOM05M001637 ORTHO05M007669 2.0e-20 102.1 123 48.8
Aco004652 Ananas comosus HOM05M001637 ORTHO05M007669 2.6e-20 101.7 132 50.0
DDU469G0412 Dioscorea dumetorum HOM05M001637 ORTHO05M007669 3.4e-20 101.3 124 46.8
Glyma.19G102400 Glycine max HOM05M001637 ORTHO05M007669 3.4e-20 101.3 128 50.8
evm.TU.AsparagusV1_10.432.V1.1 Asparagus officinalis HOM05M001637 ORTHO05M007669 9.9e-20 99.8 124 47.6
Solyc09g092110.4 Solanum lycopersicum HOM05M001637 ORTHO05M007669 1.7e-19 99.0 70 65.7
Zosma02g01320 Zostera marina HOM05M001637 ORTHO05M007669 2.2e-19 98.6 107 50.5
AT3G26740 Arabidopsis thaliana HOM05M001637 ORTHO05M007669 1.4e-18 95.9 94 54.3
Potri.003G163402 Populus trichocarpa HOM05M001637 ORTHO05M007669 2.4e-18 95.1 92 52.2
HPP92_021622 Vanilla planifolia HOM05M001637 ORTHO05M007669 3.5e-17 91.3 131 43.5
Zm00001eb390880 Zea mays B73 HOM05M001287 ORTHO05M001164 8.1e-14 80.1 90 52.2
SEGI_30338 Sequoiadendron giganteum HOM05M001637 ORTHO05M007669 4.0e-13 77.8 84 50.0
TRIDC3AG009740 Triticum dicoccoides HOM05M001637 ORTHO05M007669 2.2e-11 72.0 53 66.0
CBR_g20422 Chara braunii HOM05M001637 ORTHO05M007669 3.8e-11 71.2 113 38.1
TraesCS3B03G0222300 Triticum aestivum HOM05M001637 ORTHO05M007669 2.4e-10 68.6 110 43.6
Zm00007a00032546 Zea mays B104 HOM05M001637 ORTHO05M007669 2.4e-10 68.6 52 61.5
Zm00007a00039397 Zea mays B104 HOM05M001287 ORTHO05M001164 3.2e-10 68.2 85 49.4
Potri.014G145500 Populus trichocarpa HOM05M001637 ORTHO05M007669 5.5e-10 67.4 92 42.4
Asa7G03383 Allium sativum HOM05M001637 ORTHO05M007669 7.9e-09 63.5 63 55.6
Zm00007a00022460 Zea mays B104 HOM05M001637 ORTHO05M007669 3.0e-08 61.6 66 53.0
evm.TU.AsparagusV1_02.1216.V1.1 Asparagus officinalis HOM05M001637 ORTHO05M007669 5.1e-08 60.8 114 39.5
Mapoly0029s0093 Marchantia polymorpha HOM05M001637 ORTHO05M007669 6.7e-08 60.5 126 39.7


User provided reference genes

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