Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EJB05_08508 Eragrostis curvula HOM05M000022 ORTHO05M000013 7.3e-56 219.5 111 100.0
Misin07G141900 Miscanthus sinensis HOM05M000022 ORTHO05M000013 5.1e-17 90.5 94 54.3
Misin13G062800 Miscanthus sinensis HOM05M000022 ORTHO05M000013 6.7e-17 90.1 93 53.8
Zm00001eb414110 Zea mays B73 HOM05M000022 ORTHO05M000013 5.7e-16 87.0 92 54.3
Zm00007a00032232 Zea mays B104 HOM05M000022 ORTHO05M000013 5.7e-16 87.0 92 54.3
Sspon.06G0008830-1A Saccharum spontaneum HOM05M000022 ORTHO05M000013 9.7e-16 86.3 95 53.7
EJB05_30760 Eragrostis curvula HOM05M000022 ORTHO05M000013 3.2e-11 71.2 94 42.6
Dexi6A01G0008070 Digitaria exilis HOM05M000022 ORTHO05M000013 1.2e-10 69.3 100 43.0
Sspon.06G0008820-3C Saccharum spontaneum HOM05M000022 ORTHO05M000013 1.2e-10 69.3 60 61.7
EJB05_30753 Eragrostis curvula HOM05M000022 ORTHO05M000013 2.7e-10 68.2 93 44.1
Seita.6G020200 Setaria italica HOM05M000022 ORTHO05M000013 6.1e-10 67.0 92 44.6
Sevir.6G018700 Setaria viridis HOM05M000022 ORTHO05M000013 6.1e-10 67.0 92 44.6
Sspon.06G0008780-1A Saccharum spontaneum HOM05M000022 ORTHO05M000013 1.4e-09 65.9 98 45.9
Sspon.06G0008780-2B Saccharum spontaneum HOM05M000022 ORTHO05M000013 1.4e-09 65.9 98 45.9
Pahal.6G022600 Panicum hallii HOM05M000022 ORTHO05M014402 1.8e-09 65.5 107 37.4
OsKitaake08g072500 Oryza sativa Kitaake HOM05M000022 ORTHO05M000013 2.3e-09 65.1 87 44.8
OsR498G0815471800.01 Oryza sativa ssp. indica HOM05M000022 ORTHO05M000013 2.3e-09 65.1 87 44.8
Os08g0226000 Oryza sativa ssp. japonica HOM05M000022 ORTHO05M000013 2.3e-09 65.1 87 44.8
GWHGAORA012622 Cenchrus purpureus HOM05M000022 ORTHO05M000013 3.9e-09 64.3 100 36.0
V3.Lp_chr2_0G21178 Lolium perenne HOM05M000022 ORTHO05M000013 3.9e-09 64.3 105 39.0
GWHGAZTO093955 Oryza alta HOM05M000022 ORTHO05M000013 5.2e-09 63.9 87 41.4
OsKitaake08g073100 Oryza sativa Kitaake HOM05M000022 ORTHO05M000013 5.2e-09 63.9 87 42.5
Os08g0226800 Oryza sativa ssp. japonica HOM05M000022 ORTHO05M000013 5.2e-09 63.9 87 42.5
Sspon.06G0012120-1A Saccharum spontaneum HOM05M000022 ORTHO05M000013 5.2e-09 63.9 83 48.2
TraesCS2D03G1208200 Triticum aestivum HOM05M000022 ORTHO05M000013 5.2e-09 63.9 105 39.0
MisinT533500 Miscanthus sinensis HOM05M000022 ORTHO05M000013 6.7e-09 63.5 83 48.2
Pahal.6G022500 Panicum hallii HOM05M000022 ORTHO05M000013 6.7e-09 63.5 83 49.4
GWHGASIY043762 Secale cereale HOM05M000022 ORTHO05M000013 6.7e-09 63.5 106 42.5
GWHGAORA012649 Cenchrus purpureus HOM05M000022 ORTHO05M000013 8.8e-09 63.2 100 37.0
Dexi6B01G0006870 Digitaria exilis HOM05M000022 ORTHO05M000013 8.8e-09 63.2 85 43.5
GWHGASIY024511 Secale cereale HOM05M000022 ORTHO05M000013 8.8e-09 63.2 93 40.9
Pahal.6G076000 Panicum hallii HOM05M000022 ORTHO05M000013 1.1e-08 62.8 100 38.0
GWHGAORA012664 Cenchrus purpureus HOM05M000022 ORTHO05M016879 1.5e-08 62.4 98 40.8
PH02Gene37100 Phyllostachys edulis HOM05M000022 ORTHO05M000013 1.5e-08 62.4 100 41.0
Seita.9G331500 Setaria italica HOM05M000022 ORTHO05M000013 1.5e-08 62.4 91 45.1
GWHGAORA012660 Cenchrus purpureus HOM05M000022 ORTHO05M016879 2.0e-08 62.0 98 40.8
EJB05_08957 Eragrostis curvula HOM05M000022 ORTHO05M014392 2.0e-08 62.0 85 43.5
OsKitaake08g020400 Oryza sativa Kitaake HOM05M000022 ORTHO05M000013 2.0e-08 62.0 97 43.3
Os08g0128900 Oryza sativa ssp. japonica HOM05M000022 ORTHO05M000013 2.0e-08 62.0 97 43.3
Sobic.007G080600 Sorghum bicolor HOM05M000022 ORTHO05M000013 2.0e-08 62.0 96 37.5
AET5Gv20123500 Aegilops tauschii HOM05M000022 ORTHO05M000013 2.6e-08 61.6 90 43.3
GWHGAORA012659 Cenchrus purpureus HOM05M000022 ORTHO05M016879 2.6e-08 61.6 98 39.8
Dexi6A01G0008090 Digitaria exilis HOM05M000022 ORTHO05M000013 2.6e-08 61.6 85 42.4
EJB05_09024 Eragrostis curvula HOM05M000022 ORTHO05M000013 2.6e-08 61.6 96 42.7
EJB05_09099 Eragrostis curvula HOM05M000022 ORTHO05M000013 2.6e-08 61.6 96 42.7
Sspon.06G0008880-3C Saccharum spontaneum HOM05M000022 ORTHO05M000013 2.6e-08 61.6 96 38.5
TraesCS5D03G0122400 Triticum aestivum HOM05M000022 ORTHO05M000013 2.6e-08 61.6 90 43.3
Misin07G184400 Miscanthus sinensis HOM05M000022 ORTHO05M000013 4.4e-08 60.8 83 47.0
Ot_Chr9_gn39499 Oropetium thomaeum HOM05M000022 ORTHO05M000013 4.4e-08 60.8 85 42.4
Seita.9G331600 Setaria italica HOM05M000022 ORTHO05M014402 4.4e-08 60.8 99 40.4
Sevir.6G017000 Setaria viridis HOM05M000022 ORTHO05M000013 4.4e-08 60.8 103 42.7
EJB05_08856 Eragrostis curvula HOM05M000022 ORTHO05M000013 5.7e-08 60.5 82 45.1
TraesCS2B03G1434900 Triticum aestivum HOM05M000022 ORTHO05M000013 5.7e-08 60.5 104 40.4
TRIDC2BG082950 Triticum dicoccoides HOM05M000022 ORTHO05M000013 5.7e-08 60.5 104 40.4
TRITD2Bv1G250120 Triticum turgidum HOM05M000022 ORTHO05M000013 5.7e-08 60.5 104 40.4
Misin07G141300 Miscanthus sinensis HOM05M000022 ORTHO05M000013 7.4e-08 60.1 96 37.5
GWHGAZTO047251 Oryza alta HOM05M000022 ORTHO05M000013 7.4e-08 60.1 87 42.5
Sspon.06G0008880-1A Saccharum spontaneum HOM05M000022 ORTHO05M000013 7.4e-08 60.1 96 37.5
AET5Gv20122300 Aegilops tauschii HOM05M000022 ORTHO05M000013 9.7e-08 59.7 92 41.3
EJB05_08947 Eragrostis curvula HOM05M000022 ORTHO05M000013 9.7e-08 59.7 100 36.0
Seita.6G019700 Setaria italica HOM05M000022 ORTHO05M000013 9.7e-08 59.7 99 37.4
Sevir.6G018200 Setaria viridis HOM05M000022 ORTHO05M000013 9.7e-08 59.7 99 37.4
TraesCS2A03G1252500 Triticum aestivum HOM05M000022 ORTHO05M000013 9.7e-08 59.7 104 40.4
TraesCS2B03G1434500 Triticum aestivum HOM05M000022 ORTHO05M000013 9.7e-08 59.7 106 41.5
MisinT064400 Miscanthus sinensis HOM05M000022 ORTHO05M014402 1.3e-07 59.3 98 40.8
Dexi6A01G0008640 Digitaria exilis HOM05M000022 ORTHO05M000013 1.7e-07 58.9 92 41.3
Dexi6B01G0007180 Digitaria exilis HOM05M000022 ORTHO05M000013 1.7e-07 58.9 92 41.3
EJB05_09010 Eragrostis curvula HOM05M000022 ORTHO05M000013 1.7e-07 58.9 96 36.5
EJB05_30743 Eragrostis curvula HOM05M000022 ORTHO05M000013 1.7e-07 58.9 94 44.7
GWHGASIY019354 Secale cereale HOM05M000022 ORTHO05M000013 1.7e-07 58.9 96 43.8
TraesCS4D03G0240600 Triticum aestivum HOM05M000022 ORTHO05M000013 1.7e-07 58.9 96 43.8
TRIDC4BG019020 Triticum dicoccoides HOM05M000022 ORTHO05M000013 1.7e-07 58.9 96 43.8
Dexi6A01G0007970 Digitaria exilis HOM05M000022 ORTHO05M000013 2.2e-07 58.5 95 38.9
Misin07G142700 Miscanthus sinensis HOM05M000022 ORTHO05M000013 2.2e-07 58.5 84 44.0
Sevir.6G077000 Setaria viridis HOM05M000022 ORTHO05M000013 2.2e-07 58.5 72 48.6
TraesCS4B03G0282700 Triticum aestivum HOM05M000022 ORTHO05M000013 2.2e-07 58.5 96 43.8
TRITD3Av1G258690 Triticum turgidum HOM05M000022 ORTHO05M000013 2.2e-07 58.5 87 39.1
TRITD4Bv1G050340 Triticum turgidum HOM05M000022 ORTHO05M000013 2.2e-07 58.5 96 43.8
Bradi3g18500 Brachypodium distachyon HOM05M000022 ORTHO05M000013 2.8e-07 58.2 119 37.0
EJB05_09002 Eragrostis curvula HOM05M000022 ORTHO05M000013 2.8e-07 58.2 99 36.4
EJB05_30744 Eragrostis curvula HOM05M000022 ORTHO05M000013 2.8e-07 58.2 97 40.2
Misin13G062000 Miscanthus sinensis HOM05M000022 ORTHO05M000013 2.8e-07 58.2 96 37.5
GWHGAZTO046573 Oryza alta HOM05M000022 ORTHO05M000013 2.8e-07 58.2 93 39.8
Sobic.007G083400 Sorghum bicolor HOM05M000022 ORTHO05M000013 2.8e-07 58.2 79 46.8
TRITD5Bv1G017060 Triticum turgidum HOM05M000022 ORTHO05M000013 2.8e-07 58.2 105 38.1
Bradi3g18640 Brachypodium distachyon HOM05M000022 ORTHO05M000013 3.7e-07 57.8 103 40.8
EJB05_09054 Eragrostis curvula HOM05M000022 ORTHO05M000013 3.7e-07 57.8 90 40.0
EJB05_09066 Eragrostis curvula HOM05M000022 ORTHO05M000013 3.7e-07 57.8 90 40.0
PH02Gene28578 Phyllostachys edulis HOM05M000022 ORTHO05M000013 3.7e-07 57.8 94 42.6
Sspon.06G0012110-1A Saccharum spontaneum HOM05M000022 ORTHO05M014402 3.7e-07 57.8 100 41.0
Sevir.6G018800 Setaria viridis HOM05M000022 ORTHO05M000013 4.8e-07 57.4 100 35.0
TraesCS4A03G0516800 Triticum aestivum HOM05M000022 ORTHO05M000013 4.8e-07 57.4 103 41.7
TraesCS5B03G0111300 Triticum aestivum HOM05M000022 ORTHO05M000013 4.8e-07 57.4 87 42.5
TRIDC2AG075860 Triticum dicoccoides HOM05M000022 ORTHO05M000013 4.8e-07 57.4 85 40.0
TRIDC4AG030830 Triticum dicoccoides HOM05M000022 ORTHO05M000013 4.8e-07 57.4 103 41.7
TRITD4Av1G153920 Triticum turgidum HOM05M000022 ORTHO05M000013 4.8e-07 57.4 103 41.7
GWHGAORA012637 Cenchrus purpureus HOM05M000022 ORTHO05M014392 6.3e-07 57.0 82 41.5
Dexi6B01G0007220 Digitaria exilis HOM05M000022 ORTHO05M000013 6.3e-07 57.0 102 38.2
EJB05_08888 Eragrostis curvula HOM05M000022 ORTHO05M009851 6.3e-07 57.0 89 40.4
EJB05_08894 Eragrostis curvula HOM05M000022 ORTHO05M009851 6.3e-07 57.0 89 40.4
EJB05_09018 Eragrostis curvula HOM05M000022 ORTHO05M000013 6.3e-07 57.0 101 33.7
MisinT533400 Miscanthus sinensis HOM05M000022 ORTHO05M014402 6.3e-07 57.0 98 36.7
OsR498G0815472400.01 Oryza sativa ssp. indica HOM05M000022 ORTHO05M000013 6.3e-07 57.0 83 39.8
Sobic.007G080500 Sorghum bicolor HOM05M000022 ORTHO05M000013 6.3e-07 57.0 97 37.1
TraesCS5B03G0111200 Triticum aestivum HOM05M000022 ORTHO05M000013 6.3e-07 57.0 92 43.5
AET6Gv20697100 Aegilops tauschii HOM05M000022 ORTHO05M000013 8.2e-07 56.6 83 39.8
Dexi6A01G0008080 Digitaria exilis HOM05M000022 ORTHO05M000013 8.2e-07 56.6 99 38.4
GWHGASIY010229 Secale cereale HOM05M000022 ORTHO05M000013 8.2e-07 56.6 83 39.8
GWHGASIY032926 Secale cereale HOM05M000022 ORTHO05M000013 8.2e-07 56.6 83 39.8
GWHGASIY032938 Secale cereale HOM05M000022 ORTHO05M000013 8.2e-07 56.6 83 39.8
TraesCS6D03G0617200 Triticum aestivum HOM05M000022 ORTHO05M000013 8.2e-07 56.6 83 39.8
EJB05_09023 Eragrostis curvula HOM05M009580 ORTHO05M009851 1.1e-06 56.2 89 40.4
GWHGASIY024361 Secale cereale HOM05M000022 ORTHO05M000013 1.1e-06 56.2 105 37.1
Seita.6G018700 Setaria italica HOM05M000022 ORTHO05M000013 1.1e-06 56.2 93 44.1
Bradi3g18350 Brachypodium distachyon HOM05M000022 ORTHO05M000013 1.4e-06 55.8 83 39.8
Bradi3g18370 Brachypodium distachyon HOM05M000022 ORTHO05M000013 1.4e-06 55.8 84 39.3
GWHGAORA012626 Cenchrus purpureus HOM05M000022 ORTHO05M000013 1.4e-06 55.8 82 43.9
TRITD3Av1G000800 Triticum turgidum HOM05M000022 ORTHO05M000013 1.4e-06 55.8 103 36.9
GWHGAORA013336 Cenchrus purpureus HOM05M000343 ORTHO05M000255 1.8e-06 55.5 91 41.8
EJB05_08910 Eragrostis curvula HOM05M000022 ORTHO05M000013 1.8e-06 55.5 100 36.0
EJB05_09096 Eragrostis curvula HOM05M000022 ORTHO05M112639 1.8e-06 55.5 89 38.2
EJB05_30754 Eragrostis curvula HOM05M000022 ORTHO05M000013 1.8e-06 55.5 102 34.3
Seita.6G020300 Setaria italica HOM05M000022 ORTHO05M000013 1.8e-06 55.5 100 35.0
TraesCS7B03G1137100 Triticum aestivum HOM05M000022 ORTHO05M000013 1.8e-06 55.5 101 38.6
TRIDC7BG066960 Triticum dicoccoides HOM05M000022 ORTHO05M000013 1.8e-06 55.5 101 38.6
TRITD7Bv1G216460 Triticum turgidum HOM05M000022 ORTHO05M000013 1.8e-06 55.5 101 38.6
GWHGAORA012636 Cenchrus purpureus HOM05M000022 ORTHO05M000013 2.4e-06 55.1 94 38.3
Ot_Chr9_g13945 Oropetium thomaeum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 95 36.8
OsKitaake08g020500 Oryza sativa Kitaake HOM05M000022 ORTHO05M000013 2.4e-06 55.1 90 38.9
Pahal.6G077800 Panicum hallii HOM05M000022 ORTHO05M000013 2.4e-06 55.1 97 40.2
TraesCS5B03G1130800 Triticum aestivum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 89 37.1
TraesCS6B03G0868000 Triticum aestivum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 83 38.6
TRIDC6BG049170 Triticum dicoccoides HOM05M000022 ORTHO05M000013 2.4e-06 55.1 83 38.6
TRITD2Bv1G249870 Triticum turgidum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 98 40.8
TRITD5Bv1G222930 Triticum turgidum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 89 37.1
TRITD6Bv1G160840 Triticum turgidum HOM05M000022 ORTHO05M000013 2.4e-06 55.1 83 38.6
EJB05_09105 Eragrostis curvula HOM05M000022 ORTHO05M000013 3.1e-06 54.7 65 41.5
TraesCS6A03G0734300 Triticum aestivum HOM05M000022 ORTHO05M000013 3.1e-06 54.7 83 38.6
TraesCS7D03G1184300 Triticum aestivum HOM05M000022 ORTHO05M000013 3.1e-06 54.7 85 38.8
TRIDC6AG042220 Triticum dicoccoides HOM05M000022 ORTHO05M000013 3.1e-06 54.7 83 38.6
GWHGAORA035680 Cenchrus purpureus HOM05M000022 ORTHO05M000013 4.1e-06 54.3 83 42.2
Dexi6A01G0008630 Digitaria exilis HOM05M000022 ORTHO05M000013 4.1e-06 54.3 93 44.1
TRIDC5AG006210 Triticum dicoccoides HOM05M000022 ORTHO05M000013 4.1e-06 54.3 90 38.9
TRITD5Av1G017620 Triticum turgidum HOM05M000022 ORTHO05M000013 4.1e-06 54.3 90 38.9
Horvu_MOREX_6H01G421800 Hordeum vulgare HOM05M000022 ORTHO05M000013 5.3e-06 53.9 83 39.8
Misin13G064400 Miscanthus sinensis HOM05M000022 ORTHO05M000013 5.3e-06 53.9 94 41.5
Sobic.007G027500 Sorghum bicolor HOM05M000022 ORTHO05M014402 5.3e-06 53.9 101 40.6
TraesCS5B03G1155500 Triticum aestivum HOM05M000022 ORTHO05M000013 5.3e-06 53.9 94 35.1
TraesCS5D03G0120600 Triticum aestivum HOM05M000022 ORTHO05M000013 5.3e-06 53.9 90 38.9
TRITD3Bv1G252000 Triticum turgidum HOM05M000022 ORTHO05M000013 5.3e-06 53.9 87 35.6
TRITD5Bv1G226720 Triticum turgidum HOM05M000022 ORTHO05M000013 5.3e-06 53.9 94 35.1
Dexi6A01G0008250 Digitaria exilis HOM05M000022 ORTHO05M000013 7.0e-06 53.5 105 34.3
Dexi6B01G0007190 Digitaria exilis HOM05M000022 ORTHO05M000013 7.0e-06 53.5 93 43.0
Horvu_MOREX_5H01G654300 Hordeum vulgare HOM05M000022 ORTHO05M000013 7.0e-06 53.5 83 38.6
Sspon.06G0008820-1T Saccharum spontaneum HOM05M000022 ORTHO05M000013 7.0e-06 53.5 99 34.3
Sspon.06G0030020-2D Saccharum spontaneum HOM05M000022 ORTHO05M012565 7.0e-06 53.5 99 34.3
TraesCS3A03G0042400 Triticum aestivum HOM05M000022 ORTHO05M000013 7.0e-06 53.5 99 36.4
TraesCS6A03G0411400 Triticum aestivum HOM05M000022 ORTHO05M020530 7.0e-06 53.5 87 36.8
GWHGAORA012634 Cenchrus purpureus HOM05M000022 ORTHO05M000013 9.1e-06 53.1 94 42.6
Dexi4B01G0006700 Digitaria exilis HOM05M000022 ORTHO05M000013 9.1e-06 53.1 93 38.7
EJB05_09041 Eragrostis curvula HOM05M000022 ORTHO05M000013 9.1e-06 53.1 87 40.2
EJB05_10010 Eragrostis curvula HOM05M000022 ORTHO05M014402 9.1e-06 53.1 101 37.6
V3.Lp_chr6_0G14828 Lolium perenne HOM05M000022 ORTHO05M000013 9.1e-06 53.1 99 33.3
Misin13G063100 Miscanthus sinensis HOM05M000022 ORTHO05M000013 9.1e-06 53.1 96 35.4
GWHGAZTO047262 Oryza alta HOM05M000022 ORTHO05M000013 9.1e-06 53.1 95 41.1
Pahal.6G077900 Panicum hallii HOM05M000022 ORTHO05M000013 9.1e-06 53.1 97 37.1
GWHGASIY029178 Secale cereale HOM05M000022 ORTHO05M000013 9.1e-06 53.1 98 33.7
GWHGASIY035823 Secale cereale HOM05M000022 ORTHO05M000013 9.1e-06 53.1 105 33.3
GWHGASIY035826 Secale cereale HOM05M000022 ORTHO05M000013 9.1e-06 53.1 105 33.3
Seita.6G021000 Setaria italica HOM05M000022 ORTHO05M000013 9.1e-06 53.1 94 39.4
Sevir.6G019500 Setaria viridis HOM05M000022 ORTHO05M000013 9.1e-06 53.1 94 39.4
TraesCS2D03G0834500 Triticum aestivum HOM05M000022 ORTHO05M000013 9.1e-06 53.1 95 37.9
TraesCS7B03G1138400 Triticum aestivum HOM05M000022 ORTHO05M000013 9.1e-06 53.1 84 38.1
TRIDC4AG068140 Triticum dicoccoides HOM05M000022 ORTHO05M000013 9.1e-06 53.1 99 38.4
TRIDC7BG067080 Triticum dicoccoides HOM05M000022 ORTHO05M000013 9.1e-06 53.1 84 38.1


User provided reference genes

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