Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aco024879 Ananas comosus HOM05M003644 ORTHO05M004347 1.8e-229 798.1 408 100.0
p5.00_sc00096_p0081 Elaeis guineensis HOM05M003644 ORTHO05M004347 6.9e-160 567.0 434 69.4
Ma01_g09770 Musa acuminata HOM05M003644 ORTHO05M004347 3.4e-151 538.1 434 65.9
p5.00_sc00198_p0018 Elaeis guineensis HOM05M003644 ORTHO05M004347 4.5e-151 537.7 435 66.2
CALSI_Maker00019512 Calamus simplicifolius HOM05M003644 ORTHO05M004347 1.7e-150 535.8 456 63.4
Ma03_g14500 Musa acuminata HOM05M003644 ORTHO05M004347 2.9e-150 535.0 431 66.1
DDU049G0252 Dioscorea dumetorum HOM05M003644 ORTHO05M004347 2.5e-146 521.9 427 67.4
Ma02_g07460 Musa acuminata HOM05M003644 ORTHO05M004347 5.7e-146 520.8 432 64.4
Sobic.002G157000 Sorghum bicolor HOM05M003644 ORTHO05M004347 1.3e-145 519.6 447 64.2
Spipo12G0025700 Spirodela polyrhiza HOM05M003644 ORTHO05M004347 2.2e-145 518.8 427 66.5
DDU775G0172 Dioscorea dumetorum HOM05M003644 ORTHO05M004347 2.8e-145 518.5 429 66.0
HPP92_015734 Vanilla planifolia HOM05M003644 ORTHO05M004347 4.8e-145 517.7 436 64.0
Seita.2G161400 Setaria italica HOM05M003644 ORTHO05M004347 1.4e-144 516.2 447 63.5
Sevir.2G165600 Setaria viridis HOM05M003644 ORTHO05M004347 1.4e-144 516.2 447 63.5
Pahal.2G207500 Panicum hallii HOM05M003644 ORTHO05M004347 1.8e-144 515.8 449 63.5
Aco017093 Ananas comosus HOM05M003644 ORTHO05M004347 2.4e-144 515.4 432 66.9
OsKitaake09g036200 Oryza sativa Kitaake HOM05M003644 ORTHO05M004347 4.5e-143 511.1 446 63.5
OsR498G0916929800.01 Oryza sativa ssp. indica HOM05M003644 ORTHO05M004347 5.9e-143 510.8 446 63.2
GWHGAZTO097068 Oryza alta HOM05M003644 ORTHO05M004347 1.7e-142 509.2 446 63.0
PH02Gene32982 Phyllostachys edulis HOM05M003644 ORTHO05M004347 3.8e-142 508.1 442 64.3
GWHGAORA008599 Cenchrus purpureus HOM05M003644 ORTHO05M004347 1.4e-141 506.1 447 62.6
Zm00001eb308950 Zea mays B73 HOM05M003644 ORTHO05M004347 1.9e-141 505.8 446 63.5
Ma09_g19910 Musa acuminata HOM05M003644 ORTHO05M004347 2.5e-141 505.4 428 63.6
EJB05_44684 Eragrostis curvula HOM05M003644 ORTHO05M004347 4.2e-141 504.6 447 63.3
EJB05_56398 Eragrostis curvula HOM05M003644 ORTHO05M004347 4.2e-141 504.6 447 63.3
Bradi4g27290 Brachypodium distachyon HOM05M003644 ORTHO05M004347 7.2e-141 503.8 444 62.6
MBI14_g11787_MAGBIO Magnolia biondii HOM05M003644 ORTHO05M004347 1.2e-140 503.1 399 66.7
PH02Gene35375 Phyllostachys edulis HOM05M003644 ORTHO05M004347 1.2e-140 503.1 445 62.5
Zm00007a00012690 Zea mays B104 HOM05M003644 ORTHO05M004347 1.2e-140 503.1 447 62.2
V3.Lp_chr5_0G10778 Lolium perenne HOM05M003644 ORTHO05M004347 2.1e-140 502.3 446 62.6
Zm00007a00003101 Zea mays B104 HOM05M003644 ORTHO05M004347 7.9e-140 500.4 449 63.0
GWHGASIY025782 Secale cereale HOM05M003644 ORTHO05M004347 1.8e-139 499.2 449 61.2
AET5Gv20438300 Aegilops tauschii HOM05M003644 ORTHO05M004347 2.3e-139 498.8 452 60.6
TraesCS5D03G0432600 Triticum aestivum HOM05M003644 ORTHO05M004347 2.3e-139 498.8 452 60.6
TRIDC5BG030150 Triticum dicoccoides HOM05M003644 ORTHO05M004347 2.3e-139 498.8 449 61.0
TraesCS5A03G0469600 Triticum aestivum HOM05M003644 ORTHO05M004347 3.0e-139 498.4 452 60.6
TRIDC5AG028770 Triticum dicoccoides HOM05M003644 ORTHO05M004347 3.0e-139 498.4 452 60.6
TRITD5Av1G128990 Triticum turgidum HOM05M003644 ORTHO05M004347 3.0e-139 498.4 452 60.6
Misin04G145000 Miscanthus sinensis HOM05M003644 ORTHO05M004347 3.9e-139 498.0 447 62.9
Ot_Chr2_g25292 Oropetium thomaeum HOM05M003644 ORTHO05M004347 3.9e-139 498.0 447 61.7
TraesCS5B03G0463900 Triticum aestivum HOM05M003644 ORTHO05M004347 3.9e-139 498.0 449 61.0
Glyma.19G049500 Glycine max HOM05M003644 ORTHO05M004347 1.1e-138 496.5 436 62.8
AT1G79020 Arabidopsis thaliana HOM05M003644 ORTHO05M004347 5.7e-138 494.2 437 61.3
OsKitaake08g120000 Oryza sativa Kitaake HOM05M003644 ORTHO05M004347 1.7e-137 492.7 439 62.0
OsR498G0815826400.01 Oryza sativa ssp. indica HOM05M003644 ORTHO05M004347 1.7e-137 492.7 439 62.0
Os08g0338900 Oryza sativa ssp. japonica HOM05M003644 ORTHO05M004347 1.7e-137 492.7 439 62.0
Asa3G04173 Allium sativum HOM05M003644 ORTHO05M004347 2.2e-137 492.3 435 62.3
GWHGAZTO048039 Oryza alta HOM05M003644 ORTHO05M004347 2.2e-137 492.3 436 61.2
Glyma.13G045600 Glycine max HOM05M003644 ORTHO05M004347 2.8e-137 491.9 436 62.4
PH02Gene21635 Phyllostachys edulis HOM05M003644 ORTHO05M004347 3.7e-137 491.5 437 62.7
TRITD5Bv1G108130 Triticum turgidum HOM05M003644 ORTHO05M004347 4.8e-137 491.1 462 59.3
GWHGAZTO094633 Oryza alta HOM05M003644 ORTHO05M004347 2.4e-136 488.8 438 61.4
PH02Gene35493 Phyllostachys edulis HOM05M003644 ORTHO05M004347 4.5e-135 484.6 435 63.7
OB08G19820 Oryza brachyantha HOM05M003644 ORTHO05M004347 1.0e-134 483.4 438 61.6
Spipo10G0029000 Spirodela polyrhiza HOM05M003644 ORTHO05M004347 1.9e-133 479.2 428 61.7
MisinT360500 Miscanthus sinensis HOM05M003644 ORTHO05M004347 2.5e-133 478.8 428 62.1
Seita.6G116800 Setaria italica HOM05M003644 ORTHO05M004347 3.2e-133 478.4 434 61.3
Sevir.6G126400 Setaria viridis HOM05M003644 ORTHO05M004347 5.5e-133 477.6 434 61.3
Horvu_MOREX_5H01G298100 Hordeum vulgare HOM05M003644 ORTHO05M004347 1.2e-132 476.5 449 59.5
Potri.014G000600 Populus trichocarpa HOM05M003644 ORTHO05M004347 6.1e-132 474.2 455 59.6
Bradi3g22420 Brachypodium distachyon HOM05M003644 ORTHO05M004347 2.3e-131 472.2 437 61.3
CALSI_Maker00033173 Calamus simplicifolius HOM05M003644 ORTHO05M004347 6.7e-131 470.7 432 60.6
ATR0626G209 Amborella trichopoda HOM05M003644 ORTHO05M004347 3.7e-129 464.9 427 59.3
Solyc02g032300.3 Solanum lycopersicum HOM05M003644 ORTHO05M004347 4.8e-129 464.5 437 60.0
OB09G12390 Oryza brachyantha HOM05M003644 ORTHO05M004347 1.5e-127 459.5 379 65.2
CALSI_Maker00026413 Calamus simplicifolius HOM05M003644 ORTHO05M004347 2.6e-127 458.8 433 60.0
GWHGAORA002427 Cenchrus purpureus HOM05M003644 ORTHO05M004347 2.6e-127 458.8 435 59.3
Solyc02g081650.3 Solanum lycopersicum HOM05M003644 ORTHO05M004347 3.4e-127 458.4 430 58.8
Zosma03g08820 Zostera marina HOM05M003644 ORTHO05M004347 4.5e-127 458.0 431 58.9
CDE02G1355 Ceratophyllum demersum HOM05M003644 ORTHO05M004347 2.9e-126 455.3 429 58.3
AT1G16690 Arabidopsis thaliana HOM05M003644 ORTHO05M004347 2.5e-125 452.2 437 60.4
CDE03G0037 Ceratophyllum demersum HOM05M003644 ORTHO05M004347 8.0e-124 447.2 433 58.4
evm.TU.AsparagusV1_05.3073.V1.1 Asparagus officinalis HOM05M003644 ORTHO05M004347 7.4e-122 440.7 395 61.5
CALSI_Maker00009563 Calamus simplicifolius HOM05M003644 ORTHO05M004347 1.1e-117 426.8 419 57.5
GWHGAZTO050580 Oryza alta HOM05M003644 ORTHO05M004347 3.2e-117 425.2 383 63.2
EJB05_49757 Eragrostis curvula HOM05M003644 ORTHO05M004347 4.7e-116 421.4 451 55.4
EJB05_49764 Eragrostis curvula HOM05M003644 ORTHO05M004347 4.7e-116 421.4 451 55.4
CDE05G0598 Ceratophyllum demersum HOM05M003644 ORTHO05M004347 2.1e-108 396.0 431 52.4
CDE06G2124 Ceratophyllum demersum HOM05M003644 ORTHO05M004347 2.3e-107 392.5 374 57.8
Mapoly0014s0003 Marchantia polymorpha HOM05M003644 ORTHO05M004347 1.5e-106 389.8 457 49.7
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05M003644 ORTHO05M004347 2.4e-104 382.5 449 51.0
Zjn_sc00085.1.g01040.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M003644 ORTHO05M004347 3.3e-101 372.1 413 54.5
Dexi6B01G0009420 Digitaria exilis HOM05M003644 ORTHO05M004347 2.3e-99 365.9 469 49.0
SMO367G1242 Selaginella moellendorffii HOM05M003644 ORTHO05M004347 5.2e-99 364.8 458 48.3
Pp3c23_7050 Physcomitrium patens HOM05M003644 ORTHO05M004347 5.8e-90 334.7 453 47.0
Dexi2B01G0013090 Digitaria exilis HOM05M003644 ORTHO05M004347 2.1e-84 316.2 302 59.6
Dexi2A01G0014030 Digitaria exilis HOM05M003644 ORTHO05M004347 2.9e-81 305.8 400 46.8
Dexi6A01G0011350 Digitaria exilis HOM05M003644 ORTHO05M004347 1.6e-79 300.1 352 53.4
p5.00_sc00055_p0061 Elaeis guineensis HOM05M003644 ORTHO05M004347 5.1e-78 295.0 207 72.9
ATR0751G140 Amborella trichopoda HOM05M003644 ORTHO05M004347 2.8e-76 289.3 312 55.4
Pp3c16_8390 Physcomitrium patens HOM05M003644 ORTHO05M004347 2.9e-73 279.3 441 41.7
CBR_g38268 Chara braunii HOM05M003644 ORTHO05M004347 1.9e-69 266.5 320 49.1
Os09g0284600 Oryza sativa ssp. japonica HOM05M003644 ORTHO05M004347 1.6e-63 246.9 217 62.7
Zm00001eb097400 Zea mays B73 HOM05M003644 ORTHO05M004347 3.1e-51 206.1 202 57.9
SEGI_16863 Sequoiadendron giganteum HOM05M003644 ORTHO05M004347 8.4e-49 198.0 173 55.5
p5.00_sc00020_p0203 Elaeis guineensis HOM05M003644 ORTHO05M004347 1.1e-48 197.6 411 35.5
ATR0751G177 Amborella trichopoda HOM05M003644 ORTHO05M004347 6.7e-46 188.3 131 69.5
Asa8G04083 Allium sativum HOM05M003644 ORTHO05M004347 6.2e-44 181.8 238 43.7
Sspon.02G0017360-1A Saccharum spontaneum HOM05M003644 ORTHO05M004347 8.1e-44 181.4 175 57.1
MCO08G116 Micromonas commoda HOM05M003644 ORTHO05M004347 1.6e-36 157.1 319 35.1
Cre03.g196400 Chlamydomonas reinhardtii HOM05M003644 ORTHO05M004347 1.8e-35 153.7 471 31.0
PRCOL_00004606 Prasinoderma coloniale HOM05M003644 ORTHO05M004347 1.3e-33 147.5 295 35.3
SEGI_11104 Sequoiadendron giganteum HOM05M003644 ORTHO05M004347 2.3e-30 136.7 249 39.4
MBI11_g15900_MAGBIO Magnolia biondii HOM05M003644 ORTHO05M004347 2.5e-29 133.3 76 82.9
Zjn_sc00035.1.g00830.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M003644 ORTHO05M004347 7.9e-23 111.7 261 33.0


User provided reference genes

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