Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aco022868 Ananas comosus HOM05M000477 ORTHO05M001417 1.3e-35 151.8 74 100.0
Aco017383 Ananas comosus HOM05M000477 ORTHO05M001417 2.0e-17 91.3 105 53.3
CALSI_Maker00014124 Calamus simplicifolius HOM05M000477 ORTHO05M001417 4.6e-14 80.1 106 49.1
p5.00_sc00877_p0001 Elaeis guineensis HOM05M000477 ORTHO05M001417 3.0e-13 77.4 104 48.1
Pahal.2G355300 Panicum hallii HOM05M000477 ORTHO05M001417 3.9e-13 77.0 106 47.2
Seita.3G197600 Setaria italica HOM05M000477 ORTHO05M001417 3.9e-13 77.0 106 47.2
Sevir.3G202000 Setaria viridis HOM05M000477 ORTHO05M001417 3.9e-13 77.0 106 47.2
HPP92_015193 Vanilla planifolia HOM05M000477 ORTHO05M001417 8.7e-13 75.9 83 54.2
Dexi2A01G0024960 Digitaria exilis HOM05M000477 ORTHO05M001417 1.1e-12 75.5 106 47.2
GWHGAORA003373 Cenchrus purpureus HOM05M000477 ORTHO05M001417 1.5e-12 75.1 106 46.2
GWHGAORA038333 Cenchrus purpureus HOM05M000477 ORTHO05M001417 1.5e-12 75.1 106 46.2
PH02Gene24129 Phyllostachys edulis HOM05M000477 ORTHO05M001417 1.5e-12 75.1 106 46.2
Dexi3A01G0020430 Digitaria exilis HOM05M000477 ORTHO05M001417 2.5e-12 74.3 106 46.2
Dexi3B01G0020950 Digitaria exilis HOM05M000477 ORTHO05M001417 2.5e-12 74.3 106 46.2
Bradi1g45620 Brachypodium distachyon HOM05M000477 ORTHO05M001417 3.3e-12 73.9 106 45.3
Dexi2B01G0023640 Digitaria exilis HOM05M000477 ORTHO05M001417 3.3e-12 73.9 103 46.6
Ot_Chr9_g23264 Oropetium thomaeum HOM05M000477 ORTHO05M001417 3.3e-12 73.9 106 44.3
PH02Gene44321 Phyllostachys edulis HOM05M000477 ORTHO05M001417 3.3e-12 73.9 106 45.3
Sobic.007G063000 Sorghum bicolor HOM05M000477 ORTHO05M001417 3.3e-12 73.9 106 45.3
Seita.2G297900 Setaria italica HOM05M000477 ORTHO05M001417 4.3e-12 73.6 106 45.3
Sevir.2G308600 Setaria viridis HOM05M000477 ORTHO05M001417 4.3e-12 73.6 106 45.3
GWHGAORA007335 Cenchrus purpureus HOM05M000477 ORTHO05M001417 5.7e-12 73.2 106 45.3
GWHGAORA048461 Cenchrus purpureus HOM05M000477 ORTHO05M001417 5.7e-12 73.2 106 45.3
DDU407G0019 Dioscorea dumetorum HOM05M000477 ORTHO05M001417 7.4e-12 72.8 104 45.2
EJB05_09494 Eragrostis curvula HOM05M000477 ORTHO05M001417 7.4e-12 72.8 106 44.3
GWHGAZTO093775 Oryza alta HOM05M000477 ORTHO05M001417 7.4e-12 72.8 106 44.3
OsR498G0815314100.01 Oryza sativa ssp. indica HOM05M000477 ORTHO05M001417 7.4e-12 72.8 106 44.3
Zm00001eb171780 Zea mays B73 HOM05M000477 ORTHO05M001417 7.4e-12 72.8 106 44.3
GWHGAORA021271 Cenchrus purpureus HOM05M000477 ORTHO05M001417 9.7e-12 72.4 104 44.2
MBI03_g13450_MAGBIO Magnolia biondii HOM05M000477 ORTHO05M001417 1.3e-11 72.0 106 45.3
OB08G14960 Oryza brachyantha HOM05M000477 ORTHO05M001417 1.3e-11 72.0 106 44.3
OsKitaake08g054400 Oryza sativa Kitaake HOM05M000477 ORTHO05M001417 1.6e-11 71.6 103 44.7
Os08g0180300 Oryza sativa ssp. japonica HOM05M000477 ORTHO05M001417 1.6e-11 71.6 103 44.7
ATR0618G138 Amborella trichopoda HOM05M000477 ORTHO05M001417 2.2e-11 71.2 106 44.3
Misin07G130900 Miscanthus sinensis HOM05M000477 ORTHO05M001417 2.2e-11 71.2 105 44.8
Misin13G044700 Miscanthus sinensis HOM05M000477 ORTHO05M001417 2.2e-11 71.2 105 44.8
Pahal.7G301500 Panicum hallii HOM05M000477 ORTHO05M001417 2.2e-11 71.2 114 44.7
Misin12G230600 Miscanthus sinensis HOM05M000477 ORTHO05M001417 2.8e-11 70.9 106 45.3
Sspon.05G0003510-1A Saccharum spontaneum HOM05M000477 ORTHO05M001417 2.8e-11 70.9 106 45.3
Potri.007G000700 Populus trichocarpa HOM05M000477 ORTHO05M001417 3.7e-11 70.5 106 44.3
Zm00001eb431470 Zea mays B73 HOM05M000477 ORTHO05M001417 3.7e-11 70.5 106 45.3
Bradi3g15380 Brachypodium distachyon HOM05M000477 ORTHO05M001417 4.8e-11 70.1 106 43.4
V3.Lp_chr2_0G21712 Lolium perenne HOM05M000477 ORTHO05M001417 4.8e-11 70.1 113 42.5
V3.Lp_chr7_0.1G7060 Lolium perenne HOM05M000477 ORTHO05M001417 4.8e-11 70.1 106 42.5
Ot_Chr6_g01775 Oropetium thomaeum HOM05M000477 ORTHO05M001417 4.8e-11 70.1 106 43.4
Seita.7G248400 Setaria italica HOM05M000477 ORTHO05M001417 6.3e-11 69.7 106 44.3
Sevir.7G260400 Setaria viridis HOM05M000477 ORTHO05M001417 6.3e-11 69.7 106 44.3
Zm00007a00051959 Zea mays B104 HOM05M000477 ORTHO05M001417 6.3e-11 69.7 106 43.4
Misin12G227600 Miscanthus sinensis HOM05M000477 ORTHO05M001417 8.2e-11 69.3 106 44.3
Asa6G04148 Allium sativum HOM05M000477 ORTHO05M001417 1.1e-10 68.9 106 42.5
Glyma.10G288200 Glycine max HOM05M000477 ORTHO05M001417 1.1e-10 68.9 106 43.4
AT3G20010 Arabidopsis thaliana HOM05M000477 ORTHO05M001417 1.4e-10 68.6 105 44.8
GWHGAORA063243 Cenchrus purpureus HOM05M000477 ORTHO05M001417 1.4e-10 68.6 102 44.1
Sobic.006G225900 Sorghum bicolor HOM05M000477 ORTHO05M001417 1.4e-10 68.6 106 44.3
Zm00007a00022097 Zea mays B104 HOM05M000477 ORTHO05M001417 1.4e-10 68.6 104 44.2
Zjn_sc00112.1.g00270.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000477 ORTHO05M001417 1.4e-10 68.6 103 43.7
AET7Gv20735000 Aegilops tauschii HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
Asa5G04592 Allium sativum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 104 43.3
Horvu_MOREX_7H01G388000 Hordeum vulgare HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TraesCS7A03G0728700 Triticum aestivum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TraesCS7B03G0558300 Triticum aestivum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TraesCS7D03G0690200 Triticum aestivum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TRIDC7AG041190 Triticum dicoccoides HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TRIDC7BG032340 Triticum dicoccoides HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TRITD7Av1G147390 Triticum turgidum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
TRITD7Bv1G101900 Triticum turgidum HOM05M000477 ORTHO05M001417 1.8e-10 68.2 106 42.5
PH02Gene32101 Phyllostachys edulis HOM05M000477 ORTHO05M001417 3.1e-10 67.4 106 43.4
Asa6G00022 Allium sativum HOM05M000477 ORTHO05M001417 5.3e-10 66.6 106 41.5
GWHGASIY039328 Secale cereale HOM05M000477 ORTHO05M001417 5.3e-10 66.6 106 41.5
Glyma.20G100800 Glycine max HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
GWHGAZTO031604 Oryza alta HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
GWHGAZTO045612 Oryza alta HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
OsKitaake04g272800 Oryza sativa Kitaake HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
OsR498G0409326200.01 Oryza sativa ssp. indica HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
Os04g0629300 Oryza sativa ssp. japonica HOM05M000477 ORTHO05M001417 9.0e-10 65.9 106 41.5
Zjn_sc00004.1.g10750.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000477 ORTHO05M001417 1.2e-09 65.5 105 42.9
CDE02G3600 Ceratophyllum demersum HOM05M000477 ORTHO05M001417 1.5e-09 65.1 106 43.4
Horvu_MOREX_2H01G666100 Hordeum vulgare HOM05M000477 ORTHO05M001417 1.5e-09 65.1 113 39.8
GWHGAZTO046900 Oryza alta HOM05M000477 ORTHO05M001417 2.0e-09 64.7 100 43.0
GWHGAZTO005355 Oryza alta HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 41.5
OB01G41930 Oryza brachyantha HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 41.5
OB04G33110 Oryza brachyantha HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 40.6
OsKitaake01g347800 Oryza sativa Kitaake HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 41.5
OsR498G0102097400.01 Oryza sativa ssp. indica HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 41.5
Os01g0779400 Oryza sativa ssp. japonica HOM05M000477 ORTHO05M001417 2.6e-09 64.3 106 41.5
GWHGAZTO057701 Oryza alta HOM05M000477 ORTHO05M001417 3.4e-09 63.9 106 41.5
PH02Gene17843 Phyllostachys edulis HOM05M000477 ORTHO05M001417 4.5e-09 63.5 106 41.5
Spipo17G0039500 Spirodela polyrhiza HOM05M000477 ORTHO05M001417 4.5e-09 63.5 106 42.5
Asa5G01840 Allium sativum HOM05M000477 ORTHO05M001417 5.9e-09 63.2 105 39.0
Sspon.05G0037140-1D Saccharum spontaneum HOM05M000477 ORTHO05M001417 7.7e-09 62.8 99 44.4
Bradi5g22745 Brachypodium distachyon HOM05M000477 ORTHO05M001417 1.0e-08 62.4 114 39.5
Dexi7A01G0019720 Digitaria exilis HOM05M000477 ORTHO05M001417 1.0e-08 62.4 107 40.2
AET3Gv20733200 Aegilops tauschii HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
Bradi2g51727 Brachypodium distachyon HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
Horvu_MOREX_3H01G463700 Hordeum vulgare HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
V3.Lp_chr3_0G19326 Lolium perenne HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
MBI02_g19246_MAGBIO Magnolia biondii HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
GWHGASIY016187 Secale cereale HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TraesCS3A03G0771300 Triticum aestivum HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TraesCS3B03G0885700 Triticum aestivum HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TraesCS3D03G0713000 Triticum aestivum HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TRIDC3AG046140 Triticum dicoccoides HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TRIDC3BG052270 Triticum dicoccoides HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
TRITD3Av1G200610 Triticum turgidum HOM05M000477 ORTHO05M001417 1.7e-08 61.6 106 40.6
GWHGAORA031386 Cenchrus purpureus HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
GWHGAORA045039 Cenchrus purpureus HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
EJB05_16749 Eragrostis curvula HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Glyma.13G243600 Glycine max HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 38.7
Misin05G291800 Miscanthus sinensis HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Pahal.5G135200 Panicum hallii HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
PH02Gene24954 Phyllostachys edulis HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Seita.5G339900 Setaria italica HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Sevir.5G344200 Setaria viridis HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Sobic.003G316500 Sorghum bicolor HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Zm00001eb369880 Zea mays B73 HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Zm00007a00024922 Zea mays B104 HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
Zosma15g00160 Zostera marina HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 41.5
Zjn_sc00009.1.g10020.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000477 ORTHO05M001417 2.2e-08 61.2 106 40.6
GWHGAORA021242 Cenchrus purpureus HOM05M000477 ORTHO05M001417 3.8e-08 60.5 101 42.6
GWHGAORA045026 Cenchrus purpureus HOM05M000477 ORTHO05M001417 3.8e-08 60.5 105 41.0
CDE05G3073 Ceratophyllum demersum HOM05M000477 ORTHO05M001417 3.8e-08 60.5 106 39.6
CDE11G0864 Ceratophyllum demersum HOM05M000477 ORTHO05M001417 3.8e-08 60.5 106 39.6
TraesCS2D03G1070100 Triticum aestivum HOM05M000477 ORTHO05M001417 3.8e-08 60.5 114 40.4
ATR0693G151 Amborella trichopoda HOM05M000477 ORTHO05M001417 5.0e-08 60.1 106 38.7
GWHGAORA021243 Cenchrus purpureus HOM05M000477 ORTHO05M001417 5.0e-08 60.1 107 39.3
DDU509G0278 Dioscorea dumetorum HOM05M000477 ORTHO05M001417 5.0e-08 60.1 107 39.3
GWHGASIY010925 Secale cereale HOM05M000477 ORTHO05M001417 5.0e-08 60.1 114 40.4
TraesCS2B03G1268600 Triticum aestivum HOM05M000477 ORTHO05M001417 6.5e-08 59.7 114 40.4
TRIDC2BG072960 Triticum dicoccoides HOM05M000477 ORTHO05M001417 6.5e-08 59.7 114 40.4
Sobic.006G225700 Sorghum bicolor HOM05M000477 ORTHO05M001417 8.5e-08 59.3 107 38.3
TraesCS2A03G1124100 Triticum aestivum HOM05M000477 ORTHO05M001417 8.5e-08 59.3 114 39.5
EJB05_39722 Eragrostis curvula HOM05M000477 ORTHO05M001417 2.5e-07 57.8 107 37.4
Sspon.05G0003400-1A Saccharum spontaneum HOM05M000477 ORTHO05M001417 2.5e-07 57.8 107 37.4
Sspon.05G0003400-1P Saccharum spontaneum HOM05M000477 ORTHO05M001417 2.5e-07 57.8 104 37.5
Sspon.05G0003400-2D Saccharum spontaneum HOM05M000477 ORTHO05M001417 2.5e-07 57.8 107 37.4
GWHGAORA063262 Cenchrus purpureus HOM05M000477 ORTHO05M001417 4.2e-07 57.0 108 37.0
Misin12G231000 Miscanthus sinensis HOM05M000477 ORTHO05M001417 4.2e-07 57.0 110 37.3
GWHGAORA021272 Cenchrus purpureus HOM05M000477 ORTHO05M001417 5.5e-07 56.6 107 38.3
GWHGAORA021244 Cenchrus purpureus HOM05M000477 ORTHO05M001417 7.2e-07 56.2 107 38.3
Dexi6B01G0001420 Digitaria exilis HOM05M000477 ORTHO05M001417 9.4e-07 55.8 107 35.5
Glyma.13G183900 Glycine max HOM05M000477 ORTHO05M001417 9.4e-07 55.8 106 35.8
SMO250G0012 Selaginella moellendorffii HOM05M000477 ORTHO05M001417 3.6e-06 53.9 104 35.6
Spipo7G0000700 Spirodela polyrhiza HOM05M000477 ORTHO05M001417 4.6e-06 53.5 55 52.7


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