Gene: Carub.0008s1333

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1333
  • Transcript Identifier Carub.0008s1333.1
  • Gene Type Coding gene
  • Location scaffold_8 : 7619433-7622111 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1333.v1.1
  • pacid 39250645
  • synonym Carubv10025973m.g

Descriptions

  • Description PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
InterProion transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006813
ISO
PLAZA Integrative Orthologypotassium ion transport AT5G53130
GO:0006816
ISO
PLAZA Integrative Orthologycalcium ion transport AT5G53130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
InterProion channel activity
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT5G53130
GO:0005242
ISO
PLAZA Integrative Orthologyinward rectifier potassium channel activity AT5G53130
GO:0005221
ISO
PLAZA Integrative Orthologyintracellular cyclic nucleotide activated cation channel activity AT5G53130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G53130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005821 Ion transport domain
IPR000595 Cyclic nucleotide-binding domain
IPR014710 RmlC-like jelly roll fold
IPR018490 Cyclic nucleotide-binding-like
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)