Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TAR365G0294group16-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G3310LG-5+View
Acer truncatumAtru.chr5.1840chr5+View
Actinidia chinensisActinidia37548Lachesis_group13+View
Actinidia chinensisActinidia30130Lachesis_group24+View
Arabidopsis lyrataAL1G13680scaffold_1+View
Aquilegia oxysepalaAqoxy2G03747CHR02-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.UG1CCZPTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39arahy.Tifrunner.gnm1.Arahy.16+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.CGPP17PTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39arahy.Tifrunner.gnm1.Arahy.06-View
Arabidopsis thalianaAT1G04080Tetratricopeptide repeat (TPR)-like superfamily protein PRP39%3B FUNCTIONS IN: binding%3B INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase%3B LOCATED IN: intracellular%2C nucleus%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-processing protein%2C HAT helix (InterPro:IPR003107)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Suppressor of forked (InterPro:IPR008847)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1)%3B Has 3917 Blast hits to 3180 proteins in 483 species: Archae - 0%3B Bacteria - 599%3B Metazoa - 1588%3B Fungi - 801%3B Plants - 439%3B Viruses - 72%3B Other Eukaryotes - 418 (source: NCBI BLink). PRP39%3B INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase%3B LOCATED IN: intracellular%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-processing protein%2C HAT helix (InterPro:IPR003107)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G46400.1).Chr1+View
Beta vulgarisEL10Ac7g17680PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39Chr7_EL10_PGA_scaffold5-View
Camellia sinensis var. sinensisCSS0038534unnamed protein product [Vitis vinifera]Chr11-View
Cannabis sativaCANSAT01G3007NC_044373.1-View
Cicer arietinum L.Ca_08729_v3Ca_LG3_v3+View
Corylus avellanaHaze_24701Protein of unknown function8+View
Coffea canephoraCc01_g17830Tetratricopeptide repeat (TPR)-like superfamily proteinchr1-View
Citrus clementinaCiclev10018866m.gscaffold_3-View
Carpinus fangianaCfa002480Cfa01+View
Cardamine hirsutaCARHR003420Pre-mRNA-processing factor 39Chr1+View
Carya illinoinensisCiPaw.03G270500K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Chr03+View
Carya illinoinensisCiPaw.04G190300PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39Chr04+View
Citrullus lanatusClCG06G001450Pre-mRNA-processing factor 39CG_Chr06-View
Cucumis meloMELO3C022388.2Pre-mRNA-processing factor 39chr11+View
Carica papayaCpa.g.sc87.24supercontig_87+View
Chenopodium quinoaAUR62008790prpf39: Pre-mRNA-processing factor 39C_Quinoa_Scaffold_1710-View
Chenopodium quinoaAUR62025445prpf39: Pre-mRNA-processing factor 39C_Quinoa_Scaffold_2773+View
Capsella rubellaCarub.0001s0323PTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39scaffold_1+View
Cucumis sativus L.CsaV3_6G007400Pre-mRNA-processing factor 39chr6-View
Davidia involucrataDinv34672GWHABJS00000010-View
Davidia involucrataDinv16397GWHABJS00000007+View
Durio zibethinusDuzib133G0328NW_019167938.1-View
Durio zibethinusDuzib211G0092NW_019168049.1+View
Erigeron canadensisECA248G1198Conyza_canadensis_scaffold:9-View
Eucalyptus grandisEucgr.K01429Chr11-View
Erythranthe guttataMigut.D00473scaffold_4+View
Eutrema salsugineumThhalv10003154m.gK13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)scaffold_17+View
Eutrema salsugineumThhalv10006844m.gK13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)scaffold_5-View
Fragaria x ananassaFAN24G2116PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39Fvb2-2+View
Fragaria x ananassaFAN27G1575K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Fvb2-1-View
Fragaria vescaFvH4_2g20550PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39Fvb2-View
Gossypium hirsutumGohir.D07G158300K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)D07+View
Gossypium hirsutumGohir.D07G210300K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)D07+View
Gossypium hirsutumGohir.D11G139400K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)D11-View
Gossypium hirsutumGohir.A11G133300K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)A11-View
Gossypium hirsutumGohir.A07G204300K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)A07+View
Gossypium hirsutumGohir.A07G152100PTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39A07+View
Glycine maxGlyma.03G167000K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Gm03+View
Glycine maxGlyma.19G168100K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Gm19+View
Gossypium raimondiiGorai.001G181500Chr01+View
Gossypium raimondiiGorai.007G149700Chr07-View
Gossypium raimondiiGorai.001G237700Chr01+View
Helianthus annuusHanXRQChr01g0015001Probable tetratricopeptide repeat (TPR)-like superfamily proteinHanXRQChr01-View
Hydrangea macrophyllaHma1.2p1_0273F.1_g109230Hma1.2p1_0273F.1-View
Lupinus albusLalb_Chr01g0019501K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Lalb_Chr01-View
Lupinus albusLalb_Chr20g0113641PTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39Lalb_Chr20-View
Lotus japonicusLj1g0017598PTHR17204//PTHR17204:SF5 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39chr1-View
Lonicera japonicaLj2A1143T49GWHAAZE00000002-View
Lonicera japonicaLj1C73G6GWHAAZE00000001+View
Lactuca sativaLsat_1_v5_gn_5_181380K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Lsat_1_v8_lg_5-View
Lactuca sativaLsat_1_v5_gn_8_92021K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Lsat_1_v8_lg_8-View
Magnolia biondiiMBI10_g26043_MAGBIOAED:0.20Chr10-View
Magnolia biondiiMBI07_g23231_MAGBIOAED:0.23Chr07-View
Malus domesticaMD00G1060100Tetratricopeptide repeat (TPR)-like superfamily proteinChr00-View
Malus domesticaMD05G1189300Tetratricopeptide repeat (TPR)-like superfamily proteinChr05-View
Manihot esculentaManes.13G040100Chromosome13+View
Medicago truncatulaMedtr7g098430Pre-mRNA-processing factor 39chr7+View
Nelumbo nuciferaNn1g02962chr1+View
Nelumbo nuciferaNn3g19779chr3+View
Nicotiana tabacumNitab4.5_0000845g0220Tetratricopeptide-like helical, RNA-processing protein, HAT helixNitab4.5_0000845-View
Olea europaeaOeu015430.1chr22+View
Olea europaeaOeu052078.1chr4+View
Petunia axillarisPeaxi162Scf00043g02923Pre-mRNA-processing factor 39Peaxi162Scf00043+View
Prunus persicaPrupe.8G215900Pp08-View
Populus trichocarpaPotri.014G192800K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Chr14+View
Populus trichocarpaPotri.002G257100K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)Chr02-View
Phaseolus vulgarisPhvul.001G164500PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39Chr01+View
Quercus lobataQL09p0413229+View
Rosa chinensisRcHm_v2.0_Chr6g0286711RcHm_v2.0_Chr6-View
Striga asiaticaSGA_v2.0_scaffold138G35188scaffold138-View
Striga asiaticaSGA_v2.0_scaffold1G00650scaffold1+View
Salix brachistaSabra02G0195500GWHAAZH00000002-View
Sechium eduleSed0023704LG07+View
Schrenkiella parvulaSp2g08790K13217 - pre-mRNA-processing factor 39 (PRPF39, PRP39)ch2-4-View
Solanum pennelliiSopen09g025760PRP39 | INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase | LOCATED IN: intracellular | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .Spenn-ch09+View
Theobroma cacaoThecc.01G250900Tetratricopeptide repeat (TPR)-like superfamily proteinChromosome_1-View
Tarenaya hasslerianaTHA.LOC104826051pre-mRNA-processing factor 39-likeNW_010967707.1+View
Tarenaya hasslerianaTHA.LOC104801125LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-likeNW_010969548.1-View
Trifolium pratenseTPR.G20054Tp57577_TGAC_v2_LG6+View
Tripterygium wilfordiiTWI18G0730NC_052241.1-View
Utricularia gibbaunitig_22.g6301unitig_22+View
Vaccinium macrocarponvmacro14798Similar to PRPF39: Pre-mRNA-processing factor 39 (Homo sapiens OX%3D9606)chr7_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo1383G2023CM024070.1+View
Vitis viniferaGSVIVG01028421001chr7+View