Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr3.3837chr3+View
Actinidia chinensisActinidia23956Lachesis_group9+View
Actinidia chinensisActinidia02965Lachesis_group22-View
Arabidopsis lyrataAL8G36520scaffold_8+View
Aquilegia oxysepalaAqoxy4G02984CHR04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.CV46RIK12881 - THO complex subunit 4 (THOC4, ALY)arahy.Tifrunner.gnm1.Arahy.18-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.GS5YLTK12881 - THO complex subunit 4 (THOC4, ALY)arahy.Tifrunner.gnm1.Arahy.08-View
Arabidopsis thalianaAT5G59950RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.1)%3B Has 10964 Blast hits to 9767 proteins in 726 species: Archae - 14%3B Bacteria - 1131%3B Metazoa - 5027%3B Fungi - 1686%3B Plants - 1961%3B Viruses - 34%3B Other Eukaryotes - 1111 (source: NCBI BLink). RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G02530.2).Chr5+View
Brassica carinataBcaC04g19651ChrC04+View
Brassica carinataBcaB08g36207ChrB08-View
Brassica napusC09p52460C09+View
Brassica oleraceaBolC9t58113HC9+View
Brassica rapaBraA10t43798ZA10+View
Beta vulgarisEL10Ac7g15977K12881 - THO complex subunit 4 (THOC4, ALY)Chr7_EL10_PGA_scaffold5+View
Cicer arietinum L.Ca_19185_v3Ca_LG6_v3-View
Corylus avellanaHaze_24048Similar to ALY1: THO complex subunit 4A (Arabidopsis thaliana OX%3D3702)6+View
Coffea canephoraCc01_g12490RNA-binding (RRM/RBD/RNP motifs) family proteinchr1+View
Citrus clementinaCiclev10032532m.gscaffold_4-View
Citrus clementinaCiclev10029160m.gscaffold_8+View
Carpinus fangianaCfa011463Cfa04+View
Cardamine hirsutaCARHR273580THO complex subunitChr8+View
Carya illinoinensisCiPaw.14G071000PF13865 - C-terminal duplication domain of Friend of PRMT1 (FoP_duplication)Chr14-View
Carya illinoinensisCiPaw.13G097800K12881 - THO complex subunit 4 (THOC4, ALY)Chr13-View
Citrullus lanatusClCG02G020360THO complex subunitCG_Chr02-View
Cucumis meloMELO3C013685.2THO complex subunit 4Achr11+View
Chenopodium quinoaAUR62001823Protein of unknown functionC_Quinoa_Scaffold_2716-View
Chenopodium quinoaAUR62009610ALY1: THO complex subunit 4AC_Quinoa_Scaffold_2493-View
Capsella rubellaCarub.0008s2050PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDscaffold_8-View
Davidia involucrataDinv31434GWHABJS00000004+View
Davidia involucrataDinv25989GWHABJS00000009-View
Davidia involucrataDinv32869GWHABJS00000010+View
Durio zibethinusDuzib168G0023NW_019168159.1-View
Durio zibethinusDuzib150G1022NW_019167882.1+View
Erigeron canadensisECA236G4565Conyza_canadensis_scaffold:3-View
Eucalyptus grandisEucgr.B02389Chr02-View
Erythranthe guttataMigut.N02668scaffold_14-View
Eutrema salsugineumThhalv10014531m.gPTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDscaffold_2-View
Fragaria x ananassaFAN16G3619K12881 - THO complex subunit 4 (THOC4, ALY)Fvb3-3+View
Fragaria x ananassaFAN11G0606K12881 - THO complex subunit 4 (THOC4, ALY)Fvb3-4+View
Fragaria x ananassaFAN21G3131K12881 - THO complex subunit 4 (THOC4, ALY)Fvb3-2+View
Gossypium hirsutumGohir.A03G039600K12881 - THO complex subunit 4 (THOC4, ALY)A03+View
Gossypium hirsutumGohir.D03G128500K12881 - THO complex subunit 4 (THOC4, ALY)D03-View
Gossypium hirsutumGohir.A05G350000K12881 - THO complex subunit 4 (THOC4, ALY)A05+View
Gossypium hirsutumGohir.A07G096200K12881 - THO complex subunit 4 (THOC4, ALY)A07+View
Gossypium hirsutumGohir.A08G000177K12881 - THO complex subunit 4 (THOC4, ALY)A08+View
Gossypium hirsutumGohir.D07G100600K12881 - THO complex subunit 4 (THOC4, ALY)D07+View
Glycine maxGlyma.13G334200PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDGm13+View
Glycine maxGlyma.11G141500PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDGm11-View
Gossypium raimondiiGorai.003G135200Chr03-View
Gossypium raimondiiGorai.004G004300Chr04+View
Gossypium raimondiiGorai.001G108500Chr01+View
Helianthus annuusHanXRQChr06g0175781Probable RNA-binding (RRM/RBD/RNP motifs) family proteinHanXRQChr06-View
Hydrangea macrophyllaHma1.2p1_0624F.1_g191370Hma1.2p1_0624F.1+View
Hydrangea macrophyllaHma1.2p1_0035F.1_g022155Hma1.2p1_0035F.1+View
Lotus japonicusLj3g0023044PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDchr3-View
Lonicera japonicaLj1A157T43GWHAAZE00000001-View
Lonicera japonicaLj1C934G7GWHAAZE00000001+View
Lonicera japonicaLj2A1057G41GWHAAZE00000002+View
Lactuca sativaLsat_1_v5_gn_8_77900K12881 - THO complex subunit 4 (THOC4, ALY)Lsat_1_v8_lg_8-View
Lactuca sativaLsat_1_v5_gn_2_117740Lsat_1_v8_lg_2+View
Malus domesticaMD03G1097200RNA-binding (RRM/RBD/RNP motifs) family proteinChr03-View
Manihot esculentaManes.04G032200Chromosome04+View
Manihot esculentaManes.11G133200Chromosome11-View
Medicago truncatulaMedtr4g063557RNA and export factor-binding proteinchr4+View
Nicotiana tabacumNitab4.5_0003782g0070RNA recognition motif domain, Friend of PRMT1 duplication, Nucleotide-binding, alpha-beta plaitNitab4.5_0003782-View
Olea europaeaOeu041028.3chr20+View
Oryza sativa ssp. japonicaOs03g0278300Similar to THO complex subunit 4. Transcriptional coactivator-like protein. Similar to ALY protein.chr03-View
Punica granatumPGR102G3154NC_045129.1+View
Prunus persicaPrupe.6G081700Pp06-View
Populus trichocarpaPotri.001G236900PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDChr01+View
Quercus lobataQL01p0329641-View
Rosa chinensisRcHm_v2.0_Chr5g0063611RcHm_v2.0_Chr5+View
Rhododendron simsiiRhsim05G0189500chr05+View
Salix brachistaSabra09G0019600GWHAAZH00000009+View
Salix brachistaSabra16G0142800GWHAAZH00000016+View
Simmondsia chinensisSc12g0001620GWHAASQ00000012-View
Solanum lycopersicumSolyc11g073280.2THO complex subunit 4A-like (AHRD V3.3 *** A0A2I4FWJ6_9ROSI)SL4.0ch11+View
Schrenkiella parvulaSp6g21630PTHR19965//PTHR19965:SF29 - RNA AND EXPORT FACTOR BINDING PROTEIN // SUBFAMILY NOT NAMEDch6-6+View
Solanum tuberosumPGSC0003DMG400035146ALY proteinST4.03ch11+View
Selenicereus undatusHund04989Scaffold_19641-View
Trochodendron aralioidesTAR369G0298group18-View
Theobroma cacaoThecc.09G325800RNA-binding family proteinChromosome_9-View
Tripterygium wilfordiiTWI75G0996NC_052253.1-View
Tripterygium wilfordiiTWI31G0647NC_052233.1-View
Tripterygium wilfordiiTWI38G0221NC_052252.1+View
Vaccinium macrocarponvmacro20131Similar to ALY1: THO complex subunit 4A (Arabidopsis thaliana OX%3D3702)chr5_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1080G1188CM024079.1-View
Vitis viniferaGSVIVG01025009001chr6+View
Vitis viniferaGSVIVG01016588001chr13+View
Zea maysZm00001eb012600Zm00001e001243 THO complex subunit 4 THO complex subunit 4B1-View