Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G21070LG-5-View
Actinidia chinensisActinidia07278Lachesis_group13+View
Actinidia chinensisActinidia24255Lachesis_group24+View
Arabidopsis lyrataAL4G32030scaffold_4-View
Avicennia marinaMSTRG.12389ScioBoG_17730_HRSCAF_17811+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.VTD8RLPTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1arahy.Tifrunner.gnm1.Arahy.08+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.TG9TSUPTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1arahy.Tifrunner.gnm1.Arahy.18+View
Arabidopsis thalianaAT2G35930plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23 (PUB23)%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1)%3B Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 243%3B Fungi - 89%3B Plants - 1910%3B Viruses - 3%3B Other Eukaryotes - 222 (source: NCBI BLink).Chr2-View
Brassica carinataBcaB02g09395ChrB02-View
Brassica rapaBraA05t19936ZA05-View
Beta vulgarisEL10Ac7g16290PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDChr7_EL10_PGA_scaffold5+View
Capsicum annuumCAN.G919.47PGAv.1.6.scaffold919-View
Cicer arietinum L.Ca_01632_v3Ca_LG1_v3+View
Citrullus lanatusClCG02G022440U-box domain-containing proteinCG_Chr02-View
Cucumis meloMELO3C014520.2RING-type E3 ubiquitin transferasechr05+View
Cucumis meloMELO3C009543.2RING-type E3 ubiquitin transferasechr04-View
Chenopodium quinoaAUR62001555PUB24: E3 ubiquitin-protein ligase PUB24C_Quinoa_Scaffold_2716+View
Cucumis sativus L.CsaV3_3G038010RING-type E3 ubiquitin transferasechr3+View
Daucus carotaDCAR_012243hypothetical proteinDCARv2_Chr3+View
Durio zibethinusDuzib106G0989NW_019168492.1-View
Durio zibethinusDuzib170G0174NW_019167871.1+View
Durio zibethinusDuzib150G1488NW_019167882.1+View
Durio zibethinusDuzib128G1255NW_019168481.1-View
Erigeron canadensisECA233G0918Conyza_canadensis_scaffold:1-View
Eucalyptus grandisEucgr.B03814Chr02+View
Eucalyptus grandisEucgr.A02579Chr01-View
Erythranthe guttataMigut.J00696scaffold_10-View
Erythranthe guttataMigut.N02452scaffold_14+View
Erythranthe guttataMigut.D02388scaffold_4+View
Fragaria x ananassaFAN25G3401PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDFvb3-1+View
Fragaria x ananassaFAN21G2467PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDFvb3-2+View
Fragaria x ananassaFAN16G2662PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDFvb3-3-View
Gossypium hirsutumGohir.D04G091600PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDD04-View
Gossypium hirsutumGohir.D05G080800PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDD05+View
Gossypium hirsutumGohir.A05G077950PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDA05+View
Glycine maxGlyma.10G081900PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDGm10+View
Glycine maxGlyma.13G312700PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDGm13+View
Glycine maxGlyma.11G178046PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1Gm11-View
Glycine maxGlyma.03G202600PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDGm03+View
Gossypium raimondiiGorai.009G082600Chr09+View
Gossypium raimondiiGorai.009G396600Chr09-View
Lupinus albusLalb_Chr24g0393381PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1Lalb_Chr24-View
Lupinus albusLalb_Chr02g0154431PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDLalb_Chr02-View
Lupinus albusLalb_Chr19g0136241PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDLalb_Chr19+View
Lupinus albusLalb_Chr25g0287971PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDLalb_Chr25-View
Lotus japonicusLj3g0009101PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1chr3+View
Lotus japonicusLj3g0012262PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDchr3+View
Lonicera japonicaLj1C268T4GWHAAZE00000001+View
Malus domesticaMD03G1156000plant U-box 23Chr03-View
Malus domesticaMD11G1173500plant U-box 23Chr11+View
Manihot esculentaManes.09G045900Chromosome09+View
Medicago truncatulaMedtr2g087350E3 ubiquitin-protein ligase PUB22-like proteinchr2-View
Nicotiana tabacumNitab4.5_0000158g0020U box domain, Zinc finger, RING/FYVE/PHD-type, Armadillo-like helical, Armadillo-type foldNitab4.5_0000158+View
Olea europaeaOeu009040.1chr16+View
Olea europaeaOeu051262.1chr23-View
Oryza sativa ssp. japonicaOs04g0418500Similar to photoperiod responsive protein.chr04+View
Petunia axillarisPeaxi162Scf00010g00362U-box domain-containing protein 25Peaxi162Scf00010+View
Papaver somniferumPSO339G6565NC_039366.1+View
Populus trichocarpaPotri.006G202600PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDChr06-View
Phaseolus vulgarisPhvul.007G267700PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDChr07-View
Phaseolus vulgarisPhvul.001G196000PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATEDChr01+View
Phaseolus vulgarisPhvul.005G119100PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMEDChr05+View
Phaseolus vulgarisPhvul.011G099300PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1Chr11+View
Rhododendron simsiiRhsim03G0064200chr03-View
Striga asiaticaSGA_v2.0_scaffold22G09810scaffold22+View
Striga asiaticaSGA_v2.0_scaffold184G40015scaffold184-View
Striga asiaticaSGA_v2.0_scaffold31G12862scaffold31+View
Striga asiaticaSGA_v2.0_scaffold13G06652scaffold13+View
Salvia bowleyanaSalBow5G4772GWHASIU00000003+View
Salvia bowleyanaSalBow6G5359GWHASIU00000002+View
Simmondsia chinensisSc12g0004950GWHAASQ00000012+View
Solanum lycopersicumSolyc11g068920.1RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2VPU6_CAPBA)SL4.0ch11+View
Solanum lycopersicumSolyc06g074140.1RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CBE3_CAPCH)SL4.0ch06+View
Solanum tuberosumPGSC0003DMG400005928Spotted leaf proteinST4.03ch06+View
Solanum tuberosumPGSC0003DMG400019623U boxST4.03ch11+View
Trochodendron aralioidesTAR636G1239group1-View
Theobroma cacaoThecc.05G105300Plant U-box 24Chromosome_5+View
Tripterygium wilfordiiTWI53G1781NC_052244.1-View
Tripterygium wilfordiiTWI79G0743NC_052238.1+View
Vaccinium macrocarponvmacro07470Similar to PUB24: E3 ubiquitin-protein ligase PUB24 (Arabidopsis thaliana OX%3D3702)chr2_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo1080G0772CM024079.1+View
Zea maysZm00001eb422170Zm00001e040854 Photoperiod responsive protein10+View
Zea maysZm00001eb243070Zm00001e014752 E3 ubiquitin-protein ligase PUB235-View