Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G8180LG-5-View
Aethionema arabicumAa31LG1G12970LG-1-View
Acer truncatumAtru.chr3.3388chr3+View
Acer truncatumAtru.chr8.1641chr8+View
Actinidia chinensisActinidia07209Lachesis_group13+View
Arabidopsis lyrataAL6G33680scaffold_6+View
Arabidopsis lyrataAL6G13270scaffold_6+View
Arabidopsis lyrataAL5G22980scaffold_5+View
Arabidopsis lyrataAL4G22390scaffold_4-View
Avicennia marinaMSTRG.19226ScioBoG_25048_HRSCAF_25167-View
Avicennia marinaMSTRG.21067ScioBoG_26769_HRSCAF_26899+View
Avicennia marinaMSTRG.26653ScioBoG_52287_HRSCAF_52434+View
Avicennia marinaMSTRG.18730ScioBoG_22153_HRSCAF_22259-View
Avicennia marinaMSTRG.10350ScioBoG_13798_HRSCAF_13862-View
Aquilegia oxysepalaAqoxy1G00951CHR01+View
Aquilegia oxysepalaAqoxy2G01426CHR02+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.DY7VNHPTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDarahy.Tifrunner.gnm1.Arahy.18-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.VS5FH3PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDarahy.Tifrunner.gnm1.Arahy.13+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.63G8L5K11276 - nucleophosmin 1 (NPM1)arahy.Tifrunner.gnm1.Arahy.08-View
Arabidopsis thalianaAT5G22650histone deacetylase 2B Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems%2C leaves%2C flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation. histone deacetylase 2B (HD2B)%3B FUNCTIONS IN: histone deacetylase activity%3B INVOLVED IN: DNA mediated transformation%2C negative regulation of transcription%2C polarity specification of adaxial/abaxial axis%3B LOCATED IN: cytosol%2C nucleolus%2C cell wall%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.1)%3B Has 67941 Blast hits to 34482 proteins in 1815 species: Archae - 206%3B Bacteria - 15660%3B Metazoa - 22478%3B Fungi - 9360%3B Plants - 3234%3B Viruses - 784%3B Other Eukaryotes - 16219 (source: NCBI BLink).Chr5+View
Arabidopsis thalianaAT2G27840histone deacetylase-related / HD-like protein Belongs to the plant specific HD2 type proteins%3B similar to nucleolar Zea mays histone deacetylase%3B HD2-p39 HDT4%3B FUNCTIONS IN: histone deacetylase activity%3B INVOLVED IN: production of siRNA involved in RNA interference%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2)%3B Has 818 Blast hits to 747 proteins in 183 species: Archae - 0%3B Bacteria - 171%3B Metazoa - 199%3B Fungi - 55%3B Plants - 177%3B Viruses - 17%3B Other Eukaryotes - 199 (source: NCBI BLink).Chr2+View
Arabidopsis thalianaAT3G44750histone deacetylase 3 Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. histone deacetylase 3 (HDA3)%3B FUNCTIONS IN: histone deacetylase activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: DNA mediated transformation%2C polarity specification of adaxial/abaxial axis%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: histone deacetylase 2B (TAIR:AT5G22650.1)%3B Has 5980 Blast hits to 4690 proteins in 449 species: Archae - 12%3B Bacteria - 394%3B Metazoa - 2639%3B Fungi - 927%3B Plants - 442%3B Viruses - 82%3B Other Eukaryotes - 1484 (source: NCBI BLink).Chr3+View
Brassica carinataBcaC03g13902ChrC03+View
Brassica carinataBcaB06g28173ChrB06+View
Brassica carinataBcaC02g08226ChrC02-View
Brassica carinataBcaB08g36411ChrB08-View
Brassica carinataBcaB05g22708ChrB05-View
Brassica napusC04p57000C04+View
Brassica napusA10p18270A10-View
Brassica napusC09p53920C09-View
Brassica napusA04p21170A04+View
Brassica napusC02p11070C02+View
Brassica napusC03p12430C03+View
Brassica napusBNapus_Darmor_BZH_scaffold_38p00470BNapus_Darmor_BZH_scaffold_38-View
Brassica napusC09p73180C09-View
Brassica oleraceaBolC9t58264HC9-View
Brassica oleraceaBolC4t27235HC4+View
Brassica oleraceaBolC3t13714HC3+View
Brassica oleraceaBolC9t60053HC9-View
Brassica rapaBraA10t43903ZA10-View
Brassica rapaBraA10t45276ZA10-View
Brassica rapaBraA02t05671ZA02+View
Beta vulgarisEL10Ac7g16997PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDChr7_EL10_PGA_scaffold5+View
Beta vulgarisEL10Ac9g21071PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDChr9_EL10_PGA_scaffold8-View
Camellia sinensis var. sinensisCSS0026506PREDICTED: histone deacetylase HDT1-like [Sesamum indicum]Chr11+View
Camellia sinensis var. sinensisCSS0033564PREDICTED: histone deacetylase HDT1-like [Sesamum indicum]Chr13-View
Capsicum annuumCAN.G644.35PGAv.1.6.scaffold644+View
Cannabis sativaCANSAT54G1531NC_044375.1+View
Cicer arietinum L.Ca_08965_v3Ca_LG3_v3-View
Cicer arietinum L.Ca_19368_v3Ca_LG6_v3-View
Cicer arietinum L.Ca_01682_v3Ca_LG1_v3+View
Corylus avellanaHaze_19531Similar to HDT1: Histone deacetylase HDT1 (Glycine max OX%3D3847)10-View
Corylus avellanaHaze_23455Similar to HDT1: Histone deacetylase HDT1 (Solanum chacoense OX%3D4108)6+View
Coffea canephoraCc01_g09850Putative Histone deacetylase HDT3chr1+View
Coffea canephoraCc06_g05190Histone deacetylase HDT1chr6-View
Citrus clementinaCiclev10028932m.gscaffold_8+View
Citrus clementinaCiclev10012182m.gscaffold_6+View
Ceratophyllum demersumCDE02G45501+View
Ceratophyllum demersumCDE06G24254+View
Carpinus fangianaCfa016530Cfa07-View
Cardamine hirsutaCARHR151390histone deacetylase 3Chr5-View
Cardamine hirsutaCARHR120540histone deacetylase-related / HD-relatedChr4+View
Cardamine hirsutaCARHR190930histone deacetylase 2BChr6-View
Cardamine hirsutaCARHR209560histone deacetylase 2CChr6-View
Carya illinoinensisCiPaw.14G103900PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDChr14+View
Carya illinoinensisCiPaw.13G141200PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr13+View
Carya illinoinensisCiPaw.09G008200PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDChr09-View
Citrullus lanatusClCG02G021880histone deacetylase 3 LENGTH=245CG_Chr02-View
Citrullus lanatusClCG10G019420Histone deacetylase 2a, putativeCG_Chr10+View
Cucumis meloMELO3C009430.2histone deacetylase HDT1chr04+View
Cucumis meloMELO3C021457.2histone deacetylase HDT1-likechr11-View
Carica papayaCpa.g.sc47.60supercontig_47+View
Carica papayaCpa.g.sc5.85supercontig_5+View
Chenopodium quinoaAUR62033584HDT1: Histone deacetylase HDT1C_Quinoa_Scaffold_1776+View
Chenopodium quinoaAUR62038296HDT1: Histone deacetylase HDT1C_Quinoa_Scaffold_2169-View
Capsella rubellaCarub.0004s08603.5.1.98 - Histone deacetylase / HDACscaffold_4+View
Capsella rubellaCarub.0015s0001PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_15-View
Capsella rubellaCarub.0006s0266PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_6+View
Capsella rubellaCarub.0005s1044PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_5+View
Capsella rubellaCarub.0006s2037PF03066 - Nucleoplasmin (Nucleoplasmin)scaffold_6+View
Cucumis sativus L.CsaV3_3G036760histone deacetylase HDT1chr3-View
Cucumis sativus L.CsaV3_6G014670histone deacetylase HDT1-likechr6-View
Daucus carotaDCAR_018742hypothetical proteinDCARv2_Chr5-View
Daucus carotaDCAR_015480hypothetical proteinDCARv2_Chr4+View
Davidia involucrataDinv19823GWHABJS00000015-View
Davidia involucrataDinv29421GWHABJS00000007+View
Davidia involucrataDinv21263GWHABJS00000021+View
Durio zibethinusDuzib168G1452NW_019168159.1+View
Durio zibethinusDuzib150G0178NW_019167882.1-View
Durio zibethinusDuzib170G0280NW_019167871.1+View
Durio zibethinusDuzib093G2204NW_019167937.1+View
Erigeron canadensisECA248G1510Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA233G1515Conyza_canadensis_scaffold:1+View
Eucalyptus grandisEucgr.J00421Chr10-View
Erythranthe guttataMigut.L01752scaffold_12-View
Erythranthe guttataMigut.D02332scaffold_4-View
Eutrema salsugineumThhalv10002782m.gPTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_4-View
Eutrema salsugineumThhalv10014266m.gPTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_2+View
Eutrema salsugineumThhalv10017218m.gPTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_10+View
Eutrema salsugineumThhalv10014245m.gPTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDscaffold_2+View
Fragaria x ananassaFAN05G5765PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb6-3+View
Fragaria x ananassaFAN09G2940PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDFvb6-2+View
Fragaria x ananassaFAN21G2741PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb3-2+View
Fragaria x ananassaFAN11G2589PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb3-4-View
Fragaria x ananassaFAN14G1368PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb6-1-View
Fragaria x ananassaFAN16G0056PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb3-3+View
Fragaria vescaFvH4_3g29940PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDFvb3+View
Fragaria vescaFvH4_6g17790PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDFvb6-View
Gossypium hirsutumGohir.A05G084101PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDA05-View
Gossypium hirsutumGohir.D01G198600PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDD01+View
Gossypium hirsutumGohir.A09G092600PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDA09-View
Gossypium hirsutumGohir.A01G209500PF03066 - Nucleoplasmin (Nucleoplasmin)A01+View
Gossypium hirsutumGohir.D05G086900PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDD05-View
Gossypium hirsutumGohir.D09G092700PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDD09-View
Glycine maxGlyma.11G189500K11276 - nucleophosmin 1 (NPM1)Gm11+View
Glycine maxGlyma.12G181400PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDGm12-View
Glycine maxGlyma.13G319500PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDGm13+View
Glycine maxGlyma.19G191000PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDGm19-View
Glycine maxGlyma.03G190700PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDGm03-View
Glycine maxGlyma.12G0847003.5.1.98 - Histone deacetylase / HDACGm12-View
Gossypium raimondiiGorai.006G109300Chr06-View
Gossypium raimondiiGorai.002G242800Chr02+View
Gossypium raimondiiGorai.009G088600Chr09-View
Lupinus albusLalb_Chr20g0112191PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDLalb_Chr20+View
Lupinus albusLalb_Chr24g0395111PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDLalb_Chr24-View
Lupinus albusLalb_Chr14g0374221PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDLalb_Chr14+View
Lupinus albusLalb_Chr22g0350611PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDLalb_Chr22-View
Lupinus albusLalb_Chr03g0027901K11276 - nucleophosmin 1 (NPM1)Lalb_Chr03-View
Lotus japonicusLj3g0018637PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDchr3-View
Lotus japonicusLj1g0014712PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDchr1+View
Lotus japonicusLj3g0001709K11276 - nucleophosmin 1 (NPM1)chr3+View
Lonicera japonicaLj2C128T7GWHAAZE00000002-View
Lonicera japonicaLj2A995T21GWHAAZE00000002+View
Lactuca sativaLsat_1_v5_gn_6_42560Lsat_1_v8_lg_6+View
Magnolia biondiiMBI17_g11106_MAGBIOAED:0.07Chr17+View
Malus domesticaMD11G1156500histone deacetylase 2CChr11-View
Malus domesticaMD03G1134300histone deacetylase 3Chr03-View
Malus domesticaMD14G1014900histone deacetylase 2CChr14-View
Malus domesticaMD12G1016900histone deacetylase 2CChr12-View
Manihot esculentaManes.04G009200Chromosome04+View
Manihot esculentaManes.09G060536Chromosome09+View
Manihot esculentaManes.11G156700Chromosome11-View
Medicago truncatulaMedtr2g084815histone deacetylase 2a, putativechr2+View
Medicago truncatulaMedtr4g055440histone deacetylase HDT2, putativechr4+View
Nelumbo nuciferaNn2g13988chr2-View
Nicotiana tabacumNitab4.5_0007303g0060UnknownNitab4.5_0007303-View
Nicotiana tabacumNitab4.5_0001453g0070UnknownNitab4.5_0001453+View
Olea europaeaOeu008380.1chr1-View
Petunia axillarisPeaxi162Scf00789g00531histone deacetylase 3Peaxi162Scf00789-View
Punica granatumPGR119G1578NC_045132.1+View
Punica granatumPGR102G0030NC_045129.1-View
Prunus persicaPrupe.6G118700PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDPp06-View
Prunus persicaPrupe.7G118500Pp07+View
Pisum sativumPsat5g254240Zinc finger C2H2 type domain profile.chr5LG3+View
Pisum sativumPsat7g190640Transition metal ion bindingchr7LG7+View
Papaver somniferumPSO063G4060NC_039364.1-View
Papaver somniferumPSO384G0416NC_039368.1+View
Papaver somniferumPSO339G0838NC_039366.1-View
Populus trichocarpaPotri.009G149400PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr09+View
Populus trichocarpaPotri.006G116500PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr06+View
Populus trichocarpaPotri.004G188800PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr04+View
Phaseolus vulgarisPhvul.001G186300PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr01-View
Phaseolus vulgarisPhvul.011G090000K11276 - nucleophosmin 1 (NPM1)Chr11-View
Phaseolus vulgarisPhvul.005G127600PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATEDChr05+View
Quercus lobataQL07p0406567+View
Rosa chinensisRcHm_v2.0_Chr3g0472041RcHm_v2.0_Chr3-View
Rhododendron simsiiRhsim03G0081700chr03+View
Rhododendron simsiiRhsim01G0208600chr01+View
Rhododendron simsiiRhsim13G0105400chr13+View
Striga asiaticaSGA_v2.0_scaffold40G15411scaffold40+View
Striga asiaticaSGA_v2.0_scaffold27G11605scaffold27+View
Salvia bowleyanaSalBow3G0353GWHASIU00000006+View
Salix brachistaSabra06G0090900GWHAAZH00000006+View
Salix brachistaSabra04G0129300GWHAAZH00000004-View
Salix brachistaSabra09G0118000GWHAAZH00000009+View
Simmondsia chinensisSc21g0004690GWHAASQ00000021-View
Sechium eduleSed0023502LG05+View
Sechium eduleSed0011854LG01-View
Sechium eduleSed0003899LG04-View
Solanum lycopersicumSolyc11g066840.3Histone deacetylase HDT1 (AHRD V3.3 *** A0A2G2VQ39_CAPBA)SL4.0ch11-View
Schrenkiella parvulaSp6g38980PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDch6-6-View
Schrenkiella parvulaSp4g10680PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDch4-6+View
Schrenkiella parvulaSp6g22690PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDch6-6-View
Schrenkiella parvulaSp5g16430PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATEDch5-1-View
Solanum tuberosumPGSC0003DMG400026532DeacetylaseST4.03ch11-View
Solanum tuberosumPGSC0003DMG400002684Histone deacetylase HDT1ST4.03ch09+View
Selenicereus undatusHund00791Scaffold_33678+View
Trochodendron aralioidesTAR369G0885group18-View
Trochodendron aralioidesTAR636G1096group1-View
Trochodendron aralioidesTAR633G0649group2+View
Theobroma cacaoThecc.09G292300Histone deacetylase 2CChromosome_9+View
Theobroma cacaoThecc.05G080400Histone deacetylase 2CChromosome_5-View
Tarenaya hasslerianaTHA.LOC104799534histone deacetylase HDT1-like isoform X1NW_010968505.1-View
Tarenaya hasslerianaTHA.LOC104810899histone deacetylase HDT1-like isoform X1NW_010965304.1-View
Tarenaya hasslerianaTHA.LOC104800559histone deacetylase HDT1 isoform X1NW_010969548.1+View
Tarenaya hasslerianaTHA.LOC104814806histone deacetylase HDT2-likeNW_010965541.1+View
Trifolium pratenseTPR.G2639Tp57577_TGAC_v2_LG1+View
Trifolium pratenseTPR.G32379Tp57577_TGAC_v2_scaf_195-View
Tripterygium wilfordiiTWI74G1258NC_052234.1-View
Tripterygium wilfordiiTWI79G0547NC_052238.1-View
Tripterygium wilfordiiTWI75G0541NC_052253.1-View
Tripterygium wilfordiiTWI31G0812NC_052233.1-View
Utricularia gibbaunitig_747.g21965unitig_747+View
Vaccinium macrocarponvmacro14374Similar to HDT1: Histone deacetylase HDT1 (Glycine max OX%3D3847)chr7_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1080G0825CM024079.1-View
Vigna mungoVMungo1127G1742CM024076.1-View
Vigna mungoVMungo1383G2827CM024070.1-View
Vitis viniferaGSVIVG01033775001chr8+View
Vitis viniferaGSVIVG01031404001chr6-View