Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen09g015010Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch09-View
Sopen03g011820hypothetical proteinSpenn-ch03-View
Sopen02g008520RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch02+View
Sopen04g011470hypothetical proteinSpenn-ch04+View
Sopen07g017840Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen10g010950hypothetical proteinSpenn-ch10+View
Sopen02g003940hypothetical proteinSpenn-ch02+View
Sopen11g020060hypothetical proteinSpenn-ch11+View
Sopen11g019660DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch11+View
Sopen04g013750hypothetical proteinSpenn-ch04+View
Sopen07g020290hypothetical proteinSpenn-ch07+View
Sopen05g024780hypothetical proteinSpenn-ch05+View
Sopen11g021130hypothetical proteinSpenn-ch11+View
Sopen12g011700RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch12+View
Sopen07g014510DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen05g026260hypothetical proteinSpenn-ch05-View
Sopen06g008070Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch06+View
Sopen10g022640hypothetical proteinSpenn-ch10+View
Sopen04g017010hypothetical proteinSpenn-ch04-View
Sopen03g016020Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch03+View
Sopen01g024500DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch01-View
Sopen11g012290hypothetical proteinSpenn-ch11+View
Sopen06g010980hypothetical proteinSpenn-ch06-View
Sopen06g007150RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen05g024150DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05-View
Sopen07g012090DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07+View
Sopen07g016580hypothetical proteinSpenn-ch07+View
Sopen07g013250hypothetical proteinSpenn-ch07-View
Sopen00g004290DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch00+View
Sopen12g018040Reverse transcriptase, RNA-directed DNA polymerase (reverse transcriptase)-related family protein | CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family proteinSpenn-ch12-View
Sopen07g017460DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07+View
Sopen10g013580hypothetical proteinSpenn-ch10-View
Sopen00g003390DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch00+View
Sopen07g013630hypothetical proteinSpenn-ch07+View
Sopen09g022950DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch09-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G23210LG-5+View
Acer truncatumAtru.chr12.1482chr12-View
Acer truncatumAtru.chr13.2518chr13-View
Brassica carinataBcaB07g33613ChrB07+View
Camellia sinensis var. sinensisCSS0009374hypothetical protein VITISV_015002 [Vitis vinifera]Chr12+View
Erigeron canadensisECA240G3555Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA238G2472Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA238G3585Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA247G0874Conyza_canadensis_scaffold:7+View
Erigeron canadensisECA238G4228Conyza_canadensis_scaffold:6+View
Erigeron canadensisECA246G5243Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA240G0545Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA238G0624Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA248G2389Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA247G3342Conyza_canadensis_scaffold:7-View
Erigeron canadensisECA247G3627Conyza_canadensis_scaffold:7+View
Erigeron canadensisECA238G0330Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA246G3449Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA246G1167Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA233G3746Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA236G2789Conyza_canadensis_scaffold:3+View
Erigeron canadensisECA248G2549Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA238G0124Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA248G2460Conyza_canadensis_scaffold:9+View
Erigeron canadensisECA248G2861Conyza_canadensis_scaffold:9+View
Gossypium hirsutumGohir.A10G135733A10+View
Gossypium raimondiiGorai.009G264500Chr09-View
Papaver somniferumPSO729G0151NW_020622270.1+View
Papaver somniferumPSO421G0192NW_020619603.1-View
Sequoiadendron giganteumSEGI_01434chr7+View
Sapria himalayanaSHI15204scaffold17_11767850-View
Sapria himalayanaSHI22946scaffold34_6262321-View
Sapria himalayanaSHI14671scaffold14_12630789-View
Sapria himalayanaSHI19821scaffold25_7721883-View
Sapria himalayanaSHI01674scaffold3_21451142+View
Sapria himalayanaSHI15263scaffold17_11767850-View
Sapria himalayanaSHI01712scaffold3_21451142+View
Sapria himalayanaSHI19881scaffold25_7721883-View
Sapria himalayanaSHI06419scaffold2_22354274-View
Solanum tuberosumPGSC0003DMG400013138Gene of unknown functionST4.03ch11+View
Tripterygium wilfordiiTWI12G0720NC_052243.1-View