Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g013990hypothetical proteinSpenn-ch05-View
Sopen10g017570hypothetical proteinSpenn-ch10+View
Sopen05g012450hypothetical proteinSpenn-ch05+View
Sopen07g015490hypothetical proteinSpenn-ch07+View
Sopen09g023810hypothetical proteinSpenn-ch09-View
Sopen02g010180hypothetical proteinSpenn-ch02+View
Sopen05g014780MuDR family transposase | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Transposase, MuDR, plant | BEST Arabidopsis thaliana protein match is: MuDR family transposaseSpenn-ch05-View
Sopen07g012470hypothetical proteinSpenn-ch07-View
Sopen01g024200hypothetical proteinSpenn-ch01+View
Sopen01g005340hypothetical proteinSpenn-ch01-View
Sopen01g018790hypothetical proteinSpenn-ch01+View
Sopen07g013160hypothetical proteinSpenn-ch07+View
Sopen10g023400hypothetical proteinSpenn-ch10+View
Sopen02g006130MuDR family transposase | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Transposase, MuDR, plant | BEST Arabidopsis thaliana protein match is: MuDR family transposaseSpenn-ch02+View
Sopen10g013040hypothetical proteinSpenn-ch10-View
Sopen12g012540MuDR family transposase | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Transposase, MuDR, plant | BEST Arabidopsis thaliana protein match is: MuDR family transposaseSpenn-ch12+View
Sopen09g013570hypothetical proteinSpenn-ch09+View
Sopen07g008650hypothetical proteinSpenn-ch07-View
Sopen09g016760hypothetical proteinSpenn-ch09-View
Sopen06g013440hypothetical proteinSpenn-ch06+View
Sopen05g012050MuDR family transposase | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Transposase, MuDR, plant | BEST Arabidopsis thaliana protein match is: MuDR family transposaseSpenn-ch05+View
Sopen10g022110hypothetical proteinSpenn-ch10+View
Sopen09g015990hypothetical proteinSpenn-ch09-View
Sopen01g018450hypothetical proteinSpenn-ch01-View
Sopen10g021400Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6Spenn-ch10-View
Sopen02g008870hypothetical proteinSpenn-ch02+View
Sopen12g012890hypothetical proteinSpenn-ch12+View
Sopen03g017650hypothetical proteinSpenn-ch03-View
Sopen05g013600MuDR family transposase | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain , Zinc finger, PMZ-type , Zinc finger, SWIM-type , Transposase, MuDR, plant | BEST Arabidopsis thaliana protein match is: MuDR family transposaseSpenn-ch05+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Cannabis sativaCANSAT64G3012NC_044379.1+View
Cannabis sativaCANSAT25G0797NC_044370.1-View
Cicer arietinum L.Ca_03164_v3Ca_LG1_v3+View
Erigeron canadensisECA248G0493Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA246G4380Conyza_canadensis_scaffold:8+View
Erigeron canadensisECA240G1877Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA233G2817Conyza_canadensis_scaffold:1+View
Erigeron canadensisECA236G2775Conyza_canadensis_scaffold:3-View
Erigeron canadensisECA248G0516Conyza_canadensis_scaffold:9+View
Erigeron canadensisECA247G0881Conyza_canadensis_scaffold:7+View
Erigeron canadensisECA240G2516Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA238G4236Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA238G1433Conyza_canadensis_scaffold:6-View
Solanum tuberosumPGSC0003DMG400003236Transposon MuDR mudrAST4.03ch10-View