Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen10g020500hypothetical proteinSpenn-ch10-View
Sopen09g011430DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch09+View
Sopen07g014510DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen03g011190hypothetical proteinSpenn-ch03+View
Sopen03g013400DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch03+View
Sopen09g015010Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch09-View
Sopen05g016440DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05-View
Sopen02g008520RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch02+View
Sopen03g011820hypothetical proteinSpenn-ch03-View
Sopen01g015620DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch01-View
Sopen12g016250hypothetical proteinSpenn-ch12+View
Sopen06g010230RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen05g024150DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05-View
Sopen07g005730hypothetical proteinSpenn-ch07-View
Sopen10g006460hypothetical proteinSpenn-ch10-View
Sopen07g016580hypothetical proteinSpenn-ch07+View
Sopen01g016010hypothetical proteinSpenn-ch01+View
Sopen06g005190hypothetical proteinSpenn-ch06+View
Sopen09g012310Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily proteinSpenn-ch09-View
Sopen09g021380Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch09+View
Sopen07g013250hypothetical proteinSpenn-ch07-View
Sopen07g017460DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07+View
Sopen07g013630hypothetical proteinSpenn-ch07+View
Sopen04g011860hypothetical proteinSpenn-ch04-View
Sopen01g023890RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch01+View
Sopen10g026030hypothetical proteinSpenn-ch10-View
Sopen01g010010hypothetical proteinSpenn-ch01+View
Sopen02g006410hypothetical proteinSpenn-ch02+View
Sopen03g016020Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch03+View
Sopen06g010980hypothetical proteinSpenn-ch06-View
Sopen08g017240hypothetical proteinSpenn-ch08-View
Sopen11g012290hypothetical proteinSpenn-ch11+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgarisEL10Ac6g13991Chr6_EL10_PGA_scaffold0-View
Erigeron canadensisECA232G4145Conyza_canadensis_scaffold:2-View
Erigeron canadensisECA236G1654Conyza_canadensis_scaffold:3-View
Erigeron canadensisECA248G2506Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA238G0624Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA240G1800Conyza_canadensis_scaffold:5+View
Erigeron canadensisECA232G3375Conyza_canadensis_scaffold:2-View
Erigeron canadensisECA248G2549Conyza_canadensis_scaffold:9-View
Erigeron canadensisECA247G3342Conyza_canadensis_scaffold:7-View
Manihot esculentaManes.18G119120Chromosome18+View
Papaver somniferumPSO170G4184NC_039360.1-View
Papaver somniferumPSO339G2028NC_039366.1-View
Populus trichocarpaPotri.013G100901PTHR31286//PTHR31286:SF2 - FAMILY NOT NAMED // TA11-LIKE NON-LTR RETROELEMENT PROTEIN-RELATEDChr13-View
Salix brachistaSabra19G0086400GWHAAZH00000019-View
Sequoiadendron giganteumSEGI_33835chr4+View
Sequoiadendron giganteumSEGI_28460chr1+View
Sapria himalayanaSHI01870scaffold3_21451142+View
Sapria himalayanaSHI12494scaffold11_13529635+View
Theobroma cacaoThecc.08G176100Uncharacterized proteinChromosome_8+View