Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g020910hypothetical proteinSpenn-ch05-View
Sopen07g014510DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen06g010230RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen07g020290hypothetical proteinSpenn-ch07+View
Sopen02g003120hypothetical proteinSpenn-ch02+View
Sopen07g017840Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch07-View
Sopen06g007150RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown proteinSpenn-ch06-View
Sopen05g017140DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05+View
Sopen09g010280hypothetical proteinSpenn-ch09-View
Sopen06g005190hypothetical proteinSpenn-ch06+View
Sopen10g026030hypothetical proteinSpenn-ch10-View
Sopen01g010010hypothetical proteinSpenn-ch01+View
Sopen02g006410hypothetical proteinSpenn-ch02+View
Sopen06g010980hypothetical proteinSpenn-ch06-View
Sopen05g013290DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily proteinSpenn-ch05+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Brassica carinataBcaC01g03101ChrC01+View
Coffea canephoraCc10_g12570Hypothetical proteinchr10+View
Erigeron canadensisECA246G1206Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA246G3084Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA246G2155Conyza_canadensis_scaffold:8+View
Erigeron canadensisECA233G6043Conyza_canadensis_scaffold:1+View
Fragaria x ananassaFAN20G3133PF13456 - Reverse transcriptase-like (RVT_3)Fvb2-3-View
Lonicera japonicaLj4P659T5GWHAAZE00000004-View
Nelumbo nuciferaNn5g27699chr5-View
Olea europaeaOeu057675.1chr5+View
Quercus lobataQL02p032899CM012294-View
Sequoiadendron giganteumSEGI_10914HRSCAF_1+View
Sapria himalayanaSHI16121scaffold15_12544384-View
Solanum tuberosumPGSC0003DMG400014038Conserved gene of unknown functionST4.03ch11+View
Theobroma cacaoThecc.09G168100Uncharacterized proteinChromosome_9+View