Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG1G12160LG-1+View
Acer truncatumAtru.chr3.3760chr3-View
Actinidia chinensisActinidia03765Lachesis_group9+View
Arabidopsis lyrataAL8G36630scaffold_8+View
Aquilegia oxysepalaAqoxy4G03122CHR04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.E1FMMYK03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)arahy.Tifrunner.gnm1.Arahy.03-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.NH5KQAPTHR19376:SF32 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1arahy.Tifrunner.gnm1.Arahy.13-View
Arabidopsis thalianaAT5G60040nuclear RNA polymerase C1 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1 (NRPC1)%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C ribonucleoside binding%2C DNA binding%2C zinc ion binding%3B INVOLVED IN: transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA polymerase%2C N-terminal (InterPro:IPR006592)%2C RNA polymerase%2C alpha subunit (InterPro:IPR000722)%2C RNA polymerase Rpb1%2C domain 3 (InterPro:IPR007066)%2C RNA polymerase Rpb1%2C domain 1 (InterPro:IPR007080)%2C RNA polymerase Rpb1%2C domain 5 (InterPro:IPR007081)%2C DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700)%2C RNA polymerase Rpb1%2C domain 4 (InterPro:IPR007083)%3B BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1)%3B Has 28475 Blast hits to 24538 proteins in 8142 species: Archae - 517%3B Bacteria - 7526%3B Metazoa - 2258%3B Fungi - 3135%3B Plants - 6544%3B Viruses - 257%3B Other Eukaryotes - 8238 (source: NCBI BLink).Chr5+View
Brassica carinataBcaC01g01900ChrC01+View
Brassica carinataBcaB05g22610ChrB05+View
Brassica napusA02p06630A02-View
Brassica napusC02p11920C02-View
Brassica oleraceaBolC2t07289HC2-View
Brassica rapaBraA02t05745ZA02-View
Capsicum annuumCAN.G84.13PGAv.1.6.scaffold84+View
Cicer arietinum L.Ca_19216_v3Ca_LG6_v3+View
Corylus avellanaHaze_23976Similar to NRPC1: DNA-directed RNA polymerase III subunit 1 (Arabidopsis thaliana OX%3D3702)6-View
Coffea canephoraCc01_g11950nuclear RNA polymerase C1chr1-View
Citrus clementinaCiclev10027681m.gscaffold_8-View
Carpinus fangianaCfa011405Cfa04-View
Cardamine hirsutaCARHR155180DNA-directed RNA polymeraseChr5+View
Cardamine hirsutaCARHR273660DNA-directed RNA polymeraseChr8+View
Carya illinoinensisCiPaw.14G074800K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Chr14+View
Citrullus lanatusClCG03G002130DNA-directed RNA polymeraseCG_Chr03-View
Cucumis meloMELO3C026854.2DNA-directed RNA polymerase subunitchr12-View
Corchorus olitoriusCOL.COLO4_18403RNA polymerase%2C alpha subunitAWUE01016460.1-View
Capsella rubellaCarub.0008s2074K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)scaffold_8+View
Cucumis sativus L.CsaV3_1G012790DNA-directed RNA polymerase subunitchr1-View
Daucus carotaDCAR_018871hypothetical proteinDCARv2_Chr5+View
Durio zibethinusDuzib150G0751NW_019167882.1-View
Erigeron canadensisECA247G0560Conyza_canadensis_scaffold:7+View
Eucalyptus grandisEucgr.J02108Chr10+View
Eutrema salsugineumThhalv10012446m.gK03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)scaffold_2-View
Fragaria x ananassaFAN16G3688K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Fvb3-3-View
Fragaria x ananassaFAN21G2820K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Fvb3-2-View
Fragaria x ananassaFAN11G3166PTHR19376//PTHR19376:SF32 - DNA-DIRECTED RNA POLYMERASE // DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1Fvb3-4-View
Fragaria vescaFvH4_3g34290K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Fvb3-View
Gossypium hirsutumGohir.D03G132200K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)D03+View
Gossypium hirsutumGohir.A03G036100K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)A03-View
Glycine maxGlyma.11G147317K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Gm11+View
Gossypium raimondiiGorai.003G139100Chr03+View
Hydrangea macrophyllaHma1.2p1_0746F.1_g212240Hma1.2p1_0746F.1-View
Lupinus albusLalb_Chr01g0003921K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Lalb_Chr01+View
Lactuca sativaLsat_1_v5_gn_9_21100Lsat_1_v8_lg_9-View
Malus domesticaMD03G1106800nuclear RNA polymerase C1Chr03+View
Medicago truncatulaMedtr4g061700DNA-directed RNA polymerase I proteinchr4-View
Nicotiana tabacumNitab4.5_0004015g0070RNA polymerase Rpb1, domain 3, RNA polymerase Rpb1, domain 1, RNA polymerase Rpb1, domain 5, RNA polymerase, alpha subunit, RNA polymerase Rpb1, domain 4, DNA-directed RNA polymerase III largest subunit, RNA polymerase, N-terminalNitab4.5_0004015-View
Punica granatumPGR119G1503NC_045132.1-View
Prunus persicaPrupe.6G089600Pp06+View
Pisum sativumPsat7g221400RNA polymerase Rpb1 + domain 5chr7LG7+View
Papaver somniferumPSO384G5084NC_039368.1+View
Phaseolus vulgarisPhvul.011G070100K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)Chr11+View
Rosa chinensisRcHm_v2.0_Chr5g0061861RcHm_v2.0_Chr5-View
Rhododendron simsiiRhsim01G0223300chr01+View
Rhododendron simsiiRhsimUnG0140000ctg341-View
Sechium eduleSed0007851LG01+View
Sapria himalayanaSHI06007scaffold2_22354274+View
Schrenkiella parvulaSp6g21700K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A)ch6-6+View
Solanum pennelliiSopen11g030400Encodes a subunit of RNA polymerase III (aka RNA polymerase C). | nuclear RNA polymerase C1 (NRPC1) | FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding | INVOLVED IN: transcription | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal , RNA polymerase, alpha subunit , RNA polymerase Rpb1, domain 3 , RNA polymerase Rpb1, domain 5 , RNA polymerase Rpb1, domain 1 , DNA-directed RNA polymerase III largest subunit , RNA polymerase Rpb1, domain 4 | BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit ., RNA polymerase Rpb1, domain 5, DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) - Mesostigma virideSpenn-ch11-View
Solanum tuberosumPGSC0003DMG402025354DNA-directed RNA polymeraseST4.03ch11-View
Trochodendron aralioidesTAR623G0006group7-View
Theobroma cacaoThecc.09G333600DNA-directed RNA polymeraseChromosome_9+View
Tarenaya hasslerianaTHA.LOC104810826DNA-directed RNA polymerase III subunit 1NW_010965304.1+View
Trifolium pratenseTPR.G2993Tp57577_TGAC_v2_LG4-View
Tripterygium wilfordiiTWI75G1460NC_052253.1-View
Vaccinium macrocarponvmacro14493Similar to NRPC1: DNA-directed RNA polymerase III subunit 1 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1127G1617CM024076.1+View
Vitis viniferaGSVIVG01025079001chr6-View