Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g005110.340S ribosomal protein S23 (AHRD V3.3 *** A0A2I4EYK6_9ROSI)SL4.0ch06+View
Solyc09g007350.3Ribosomal protein S23 (AHRD V3.3 *** A8IJQ4_CHLRE)SL4.0ch09-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG1G12370LG-1-View
Acer truncatumAtru.chr8.2557chr8-View
Acer truncatumAtru.chr3.3716chr3+View
Actinidia chinensisActinidia03751Lachesis_group9+View
Actinidia chinensisActinidia07108Lachesis_group13-View
Arabidopsis lyrataAL8G36820scaffold_8-View
Avicennia marinaMSTRG.21148ScioBoG_26769_HRSCAF_26899+View
Amaranthus hybridusAh.01g014890Interactor of constitutive active ROPs 3 (ROP-interactive partner 5)AmaHy_arrow1_Scaffold_1-View
Aquilegia oxysepalaAqoxy4G03195CHR04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.3WQI06arahy.Tifrunner.gnm1.Arahy.18-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.G3522Parahy.Tifrunner.gnm1.Arahy.16+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.AAN9CDarahy.Tifrunner.gnm1.Arahy.08-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.X9H47SKOG1937 - Uncharacterized conserved proteinarahy.Tifrunner.gnm1.Arahy.03+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.C0K4NAKOG1937 - Uncharacterized conserved proteinarahy.Tifrunner.gnm1.Arahy.13+View
Arabidopsis thalianaAT5G60210ROP interactive partner 5 Encodes RIP5 (ROP interactive partner 5)%2C a putative Rho protein effector%2C interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 5 (RIP5)%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 (TAIR:AT2G37080.1)%3B Has 98994 Blast hits to 51471 proteins in 2911 species: Archae - 1324%3B Bacteria - 16057%3B Metazoa - 45939%3B Fungi - 8665%3B Plants - 5713%3B Viruses - 271%3B Other Eukaryotes - 21025 (source: NCBI BLink).Chr5-View
Brassica carinataBcaB05g22628ChrB05-View
Brassica napusA02p06550A02+View
Brassica napusC02p11840C02+View
Brassica oleraceaBolC9t60107HC9+View
Brassica oleraceaBolC2t07278HC2+View
Brassica rapaBraA03t10441ZA03+View
Brassica rapaBraA02t05738ZA02+View
Beta vulgarisEL10Ac9g22420Chr9_EL10_PGA_scaffold8-View
Camellia sinensis var. sinensisCSS0026079hypothetical protein L484_014428 [Morus notabilis]Chr4+View
Cannabis sativaCANSAT54G0448NC_044375.1-View
Cicer arietinum L.Ca_01435_v3Ca_LG1_v3-View
Corylus avellanaHaze_23938Similar to ICR3: Interactor of constitutive active ROPs 3 (Arabidopsis thaliana OX%3D3702)6+View
Corylus avellanaHaze_16936Similar to RPS23: 40S ribosomal protein S23 (Fragaria ananassa OX%3D3747)11+View
Corylus avellanaHaze_20647Similar to ICR2: Interactor of constitutive active ROPs 2, chloroplastic (Arabidopsis thaliana OX%3D3702)10+View
Coffea canephoraCc01_g11650Putative Interactor of constitutive active ROPs 3chr1+View
Citrus clementinaCiclev10027972m.gscaffold_8+View
Citrus clementinaCiclev10011300m.gscaffold_6+View
Ceratophyllum demersumCDE09G12837+View
Ceratophyllum demersumCDE02G33141-View
Carpinus fangianaCfa011374Cfa04+View
Carpinus fangianaCfa001594Cfa01-View
Carpinus fangianaCfa017510Cfa07-View
Cardamine hirsutaCARHR273890Interactor of constitutive active ROPs 3Chr8-View
Carya illinoinensisCiPaw.09G179900Chr09+View
Carya illinoinensisCiPaw.14G077200Chr14-View
Carya illinoinensisCiPaw.13G106000Chr13-View
Citrullus lanatusClCG03G002420Interactor of constitutive active ROPsCG_Chr03+View
Citrullus lanatusClCG02G02086040S ribosomal protein S23CG_Chr02-View
Cucumis meloMELO3C025738.2Ribosomal protein S12chr11-View
Chenopodium quinoaAUR62025028ICR3: Interactor of constitutive active ROPs 3C_Quinoa_Scaffold_4082+View
Chenopodium quinoaAUR62006504ICR3: Interactor of constitutive active ROPs 3C_Quinoa_Scaffold_3429-View
Capsella rubellaCarub.0008s2096scaffold_8-View
Cucumis sativus L.CsaV3_6G021530Ribosomal protein S23chr6-View
Daucus carotaDCAR_006038hypothetical proteinDCARv2_Chr2-View
Davidia involucrataDinv35710GWHABJS00000015-View
Davidia involucrataDinv32802GWHABJS00000010+View
Durio zibethinusDuzib170G0124NW_019167871.1+View
Durio zibethinusDuzib128G0466NW_019168481.1+View
Durio zibethinusDuzib093G0204NW_019167937.1+View
Durio zibethinusDuzib168G0376NW_019168159.1-View
Durio zibethinusDuzib150G1393NW_019167882.1-View
Erigeron canadensisECA233G5130Conyza_canadensis_scaffold:1-View
Eucalyptus grandisEucgr.B02460Chr02-View
Erythranthe guttataMigut.N02628scaffold_14+View
Eutrema salsugineumThhalv10015878m.gKOG0993 - Rab5 GTPase effector Rabaptin-5scaffold_2+View
Fragaria x ananassaFAN21G1957K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Fvb3-2-View
Fragaria x ananassaFAN14G2440KOG4593 - Mitotic checkpoint protein MAD1Fvb6-1+View
Fragaria x ananassaFAN11G3675K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Fvb3-4-View
Fragaria x ananassaFAN09G4646KOG4593 - Mitotic checkpoint protein MAD1Fvb6-2+View
Fragaria x ananassaFAN16G2424KOG0963 - Transcription factor/CCAAT displacement protein CDP1Fvb3-3+View
Fragaria x ananassaFAN25G0821Fvb3-1+View
Fragaria vescaFvH4_3g33632KOG0963//KOG0978 - Transcription factor/CCAAT displacement protein CDP1 // E3 ubiquitin ligase involved in syntaxin degradationFvb3+View
Fragaria vescaFvH4_6g15372KOG4593 - Mitotic checkpoint protein MAD1Fvb6-View
Gossypium hirsutumGohir.A01G217000A01+View
Gossypium hirsutumGohir.D09G102400D09-View
Gossypium hirsutumGohir.A09G105600A09-View
Glycine maxGlyma.19G178800K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Gm19-View
Glycine maxGlyma.13G328900Gm13+View
Glycine maxGlyma.12G072200Gm12+View
Glycine maxGlyma.11G151706PTHR11652:SF16 - 40S RIBOSOMAL PROTEIN S23-1Gm11-View
Glycine maxGlyma.10G049400K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Gm10-View
Glycine maxGlyma.03G178000K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Gm03-View
Glycine maxGlyma.15G044900Gm15-View
Glycine maxGlyma.13G137100K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Gm13-View
Gossypium raimondiiGorai.002G250100Chr02+View
Lupinus albusLalb_Chr19g0137441Lalb_Chr19+View
Lupinus albusLalb_Chr14g0374821Lalb_Chr14+View
Lupinus albusLalb_Chr24g0394421Lalb_Chr24-View
Lupinus albusLalb_Chr01g0004121Lalb_Chr01-View
Lupinus albusLalb_Chr03g0027061Lalb_Chr03-View
Lotus japonicusLj1g0024319K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)chr1+View
Lotus japonicusLj3g0023755K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)chr3-View
Lotus japonicusLj3g0027820chr3-View
Lonicera japonicaLj2C1038G2GWHAAZE00000002+View
Lonicera japonicaLj1A183T51GWHAAZE00000001-View
Lonicera japonicaLj2A107T63GWHAAZE00000002-View
Lactuca sativaLsat_1_v5_gn_6_24000Lsat_1_v8_lg_6-View
Malus domesticaMD03G1110100Ribosomal protein S12/S23 family proteinChr03-View
Malus domesticaMD07G1179600Ribosomal protein S12/S23 family proteinChr07-View
Malus domesticaMD11G1123500Ribosomal protein S12/S23 family proteinChr11-View
Manihot esculentaManes.07G101800Chromosome07-View
Manihot esculentaManes.04G026300Chromosome04+View
Manihot esculentaManes.11G140400Chromosome11-View
Medicago truncatulaMedtr4g461060interactor of constitutive active ROPs-like proteinchr4+View
Medicago truncatulaMedtr2g093240interactor of constitutive active ROPs protein, putativechr2-View
Nelumbo nuciferaNn2g10659chr2-View
Nelumbo nuciferaNn2g12995chr2-View
Nicotiana tabacumNitab4.5_0000888g0210UnknownNitab4.5_0000888-View
Olea europaeaOeu005919.3chr4+View
Olea europaeaOeu038947.1chr20-View
Punica granatumPGR102G2478NC_045129.1-View
Prunus persicaPrupe.6G092700K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Pp06-View
Prunus persicaPrupe.6G241200Pp06+View
Pisum sativumPsat7g222360Unknown genechr7LG7-View
Pisum sativumPsat5g277040Unknown genechr5LG3-View
Papaver somniferumPSO339G6671NC_039366.1+View
Papaver somniferumPSO384G3662NC_039368.1+View
Papaver somniferumPSO339G0908NC_039366.1+View
Populus trichocarpaPotri.008G044400K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Chr08+View
Populus trichocarpaPotri.016G085800K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Chr16-View
Populus trichocarpaPotri.010G217100K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Chr10-View
Populus trichocarpaPotri.006G131400Chr06+View
Phaseolus vulgarisPhvul.011G072000Chr11-View
Phaseolus vulgarisPhvul.005G137600Chr05+View
Phaseolus vulgarisPhvul.001G174900K02973 - small subunit ribosomal protein S23e (RP-S23e, RPS23)Chr01-View
Quercus lobataQL07p0452487+View
Quercus lobataQL08p0568508+View
Quercus lobataQL01p0366491-View
Rosa chinensisRcHm_v2.0_Chr5g0061061RcHm_v2.0_Chr5+View
Rhododendron simsiiRhsim01G0220900chr01+View
Striga asiaticaSGA_v2.0_scaffold2G00916scaffold2-View
Salvia bowleyanaSalBow3G2191GWHASIU00000006+View
Salvia bowleyanaSalBow3G2047GWHASIU00000006-View
Salix brachistaSabra16G0092300GWHAAZH00000016-View
Salix brachistaSabra08G0030700GWHAAZH00000008+View
Salix brachistaSabra10G0168000GWHAAZH00000010-View
Simmondsia chinensisSc21g0000010GWHAASQ00000021-View
Sechium eduleSed0005305LG05+View
Sechium eduleSed0016366LG01-View
Schrenkiella parvulaSp6g21840ch6-6-View
Solanum pennelliiSopen11g030140ROP interactive partner 5 (RIP5) | BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 .Spenn-ch11+View
Solanum pennelliiSopen09g00225040S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry), Ribosomal protein S12/S23 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome | EXPRESSED IN: guard cell, leaf | CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal , Ribosomal protein S12/S23 , Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold | BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family proteinSpenn-ch09-View
Solanum tuberosumPGSC0003DMG40002539840S ribosomal protein S23ST4.03ch06-View
Solanum tuberosumPGSC0003DMG400025371Myosin heavy chainST4.03ch11+View
Trochodendron aralioidesTAR636G1469group1+View
Trochodendron aralioidesTAR369G0328group18-View
Trochodendron aralioidesTAR633G0231group2-View
Trochodendron aralioidesTAR623G0803group7+View
Theobroma cacaoThecc.10G068100Ribosomal protein S12/S23 family proteinChromosome_10+View
Theobroma cacaoThecc.09G261500ROP interactive partner 5Chromosome_9+View
Tarenaya hasslerianaTHA.LOC104810837interactor of constitutive active ROPs 3NW_010965304.1-View
Trifolium pratenseTPR.G2981Tp57577_TGAC_v2_LG4+View
Tripterygium wilfordiiTWI79G0235NC_052238.1-View
Tripterygium wilfordiiTWI75G0103NC_052253.1-View
Tripterygium wilfordiiTWI31G1142NC_052233.1-View
Vaccinium macrocarponvmacro20057Similar to ICR2: Interactor of constitutive active ROPs 2, chloroplastic (Arabidopsis thaliana OX%3D3702)chr5_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro14472Similar to ICR3: Interactor of constitutive active ROPs 3 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1127G0512CM024076.1-View
Vigna mungoVMungo1383G2025CM024070.1-View
Vigna mungoVMungo1080G0217CM024079.1-View
Vitis viniferaGSVIVG01025121001chr6+View