Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc04g012180.4Ras-related protein Rab11A (AHRD V3.3 *** A0A1U8GVA9_CAPAN)SL4.0ch04-View
Solyc05g051570.3Rab family GTPase (AHRD V3.3 *** A0A1Y1IFP9_KLENI)SL4.0ch05-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG6G15250LG-6-View
Acer truncatumAtru.chr3.1362chr3-View
Actinidia chinensisActinidia19998Lachesis_group11-View
Actinidia chinensisActinidia06545Lachesis_group16+View
Arabidopsis lyrataAL4G11780scaffold_4+View
Avicennia marinaMSTRG.23344ScioBoG_3895_HRSCAF_3912+View
Avicennia marinaMSTRG.2577ScioBoG_102835_HRSCAF_103059+View
Aquilegia oxysepalaAqoxy6G00735CHR06-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.VDBV8AK07904 - Ras-related protein Rab-11A (RAB11A)arahy.Tifrunner.gnm1.Arahy.13-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.UY4KU0K07904 - Ras-related protein Rab-11A (RAB11A)arahy.Tifrunner.gnm1.Arahy.03-View
Arabidopsis thalianaAT2G22290RAB GTPase homolog H1D RAB GTPase homolog H1D (RABH1d)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab6-related (InterPro:IPR015600)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1)%3B Has 26960 Blast hits to 26930 proteins in 721 species: Archae - 17%3B Bacteria - 142%3B Metazoa - 14130%3B Fungi - 3768%3B Plants - 3162%3B Viruses - 20%3B Other Eukaryotes - 5721 (source: NCBI BLink).Chr2+View
Arabidopsis thalianaAT5G65270RAB GTPase homolog A4A RAB GTPase homolog A4A (RABA4a)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B (TAIR:AT4G39990.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
Brassica carinataBcaB08g37115ChrB08-View
Brassica carinataBcaB01g05543ChrB01-View
Brassica carinataBcaNung00923Contig372+View
Brassica carinataBcaC07g41083ChrC07-View
Brassica napusC08p40870C08-View
Brassica napusC01p01020C01+View
Brassica napusC09p67060C09-View
Brassica napusA01p00890A01+View
Brassica napusA10p27250A10-View
Brassica oleraceaBolC9t59479HC9-View
Brassica oleraceaBolC3t13026HC3+View
Brassica oleraceaBolC8t51653HC8-View
Brassica oleraceaBolC1t00099HC1+View
Brassica rapaBraA10t44775ZA10-View
Brassica rapaBraA09t41160ZA09-View
Brassica rapaBraA01t00088ZA01+View
Beta vulgarisEL10Ac6g14825K07904 - Ras-related protein Rab-11A (RAB11A)Chr6_EL10_PGA_scaffold0-View
Camellia sinensis var. sinensisCSS0041081PREDICTED: ras-related protein Rab11A [Nelumbo nucifera]Chr1-View
Capsicum annuumCAN.G905.29PGAv.1.6.scaffold905-View
Cannabis sativaCANSAT01G0543NC_044373.1+View
Cicer arietinum L.Ca_16515_v3Ca_LG5_v3-View
Corylus avellanaHaze_24877Similar to RAB11D: Ras-related protein Rab11D (Nicotiana tabacum OX%3D4097)8-View
Coffea canephoraCc07_g14760Ras-related protein RABA4achr7-View
Citrus clementinaCiclev10026427m.gscaffold_7-View
Ceratophyllum demersumCDE03G048912-View
Ceratophyllum demersumCDE10G01548+View
Ceratophyllum demersumCDE10G09578-View
Carpinus fangianaCfa002616Cfa01-View
Cardamine hirsutaCARHR203040Ras-related protein Rab-6AChr6-View
Cardamine hirsutaCARHR246690Ras-related protein Rab-25Chr7-View
Cardamine hirsutaCARHR279220Ras-related protein Rab-25Chr8+View
Carya illinoinensisCiPaw.04G102900K07904 - Ras-related protein Rab-11A (RAB11A)Chr04+View
Carya illinoinensisCiPaw.05G033100K07904 - Ras-related protein Rab-11A (RAB11A)Chr05-View
Citrullus lanatusClCG01G018620Ras-related protein Rab-25CG_Chr01-View
Cucumis meloMELO3C007742.2ras-related protein Rab11Achr08-View
Corchorus olitoriusCOL.COLO4_27281Small GTPase superfamilyAWUE01019526.1+View
Carica papayaCpa.g.sc55.84supercontig_55-View
Chenopodium quinoaAUR62003251RAB11D: Ras-related protein Rab11DC_Quinoa_Scaffold_1000+View
Chenopodium quinoaAUR62027219RAB11D: Ras-related protein Rab11DC_Quinoa_Scaffold_2924-View
Cucumis sativus L.CsaV3_6G045290Ras-related protein likechr6-View
Daucus carotaDCAR_003478hypothetical proteinDCARv2_Chr1-View
Davidia involucrataDinv13220GWHABJS00000014-View
Davidia involucrataDinv08848GWHABJS00000021-View
Durio zibethinusDuzib147G0506NW_019168470.1+View
Eucalyptus grandisEucgr.I00531Chr09+View
Erythranthe guttataMigut.H02343scaffold_8-View
Eutrema salsugineumThhalv10000663m.gPTHR24073:SF475 - RAS-RELATED PROTEIN RABH1C-RELATEDscaffold_15+View
Eutrema salsugineumThhalv10014689m.gK07893 - Ras-related protein Rab-6A (RAB6A)scaffold_2+View
Eutrema salsugineumThhalv10004873m.gK07904 - Ras-related protein Rab-11A (RAB11A)scaffold_6-View
Fragaria x ananassaFAN19G3042K07904 - Ras-related protein Rab-11A (RAB11A)Fvb1-4-View
Fragaria x ananassaFAN23G0758K07904 - Ras-related protein Rab-11A (RAB11A)Fvb1-3-View
Fragaria x ananassaFAN28G0985K07904 - Ras-related protein Rab-11A (RAB11A)Fvb1-1+View
Fragaria x ananassaFAN26G1715K07904 - Ras-related protein Rab-11A (RAB11A)Fvb1-2-View
Fragaria vescaFvH4_1g20380K07904 - Ras-related protein Rab-11A (RAB11A)Fvb1-View
Gossypium hirsutumGohir.D11G219500K07904 - Ras-related protein Rab-11A (RAB11A)D11-View
Gossypium hirsutumGohir.A02G129000KOG0087 - GTPase Rab11/YPT3, small G protein superfamilyA02+View
Gossypium hirsutumGohir.D03G039800KOG0087 - GTPase Rab11/YPT3, small G protein superfamilyD03+View
Gossypium hirsutumGohir.D11G054700K07904 - Ras-related protein Rab-11A (RAB11A)D11-View
Gossypium hirsutumGohir.A11G051300K07904 - Ras-related protein Rab-11A (RAB11A)A11-View
Gossypium hirsutumGohir.D12G083100K07893 - Ras-related protein Rab-6A (RAB6A)D12-View
Glycine maxGlyma.18G015700K07904 - Ras-related protein Rab-11A (RAB11A)Gm18-View
Glycine maxGlyma.05G176300K07904 - Ras-related protein Rab-11A (RAB11A)Gm05-View
Glycine maxGlyma.08G133800K07904 - Ras-related protein Rab-11A (RAB11A)Gm08-View
Gossypium raimondiiGorai.003G040900Chr03+View
Gossypium raimondiiGorai.008G090100Chr08-View
Gossypium raimondiiGorai.007G234300Chr07+View
Gossypium raimondiiGorai.007G060000Chr07-View
Lupinus albusLalb_Chr07g0185291K07904 - Ras-related protein Rab-11A (RAB11A)Lalb_Chr07+View
Lupinus albusLalb_Chr08g0231021PTHR24073//PTHR24073:SF475 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABH1C-RELATEDLalb_Chr08+View
Lonicera japonicaLj4A898G54GWHAAZE00000004+View
Lonicera japonicaLj2C541G13GWHAAZE00000002-View
Lactuca sativaLsat_1_v5_gn_2_66201K07904 - Ras-related protein Rab-11A (RAB11A)Lsat_1_v8_lg_2+View
Magnolia biondiiMBI02_g27967_MAGBIOAED:0.04Chr02+View
Malus domesticaMD15G1321700RAB GTPase homolog A4AChr15-View
Manihot esculentaManes.13G095900Chromosome13+View
Manihot esculentaManes.12G131100Chromosome12-View
Medicago truncatulaMedtr3g086980RAB GTPase-like protein A1Dchr3-View
Medicago truncatulaMedtr8g089985RAB GTPase-like protein A1Dchr8-View
Nelumbo nuciferaNn5g30028chr5-View
Nelumbo nuciferaNn1g05427chr1+View
Nicotiana tabacumNitab4.5_0002604g0020Ran GTPase, Small GTPase superfamily, Small GTPase superfamily, Rab type, Small GTPase superfamily, Ras type, Small GTP-binding protein domain, Small GTPase superfamily, ARF type, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Rho typeNitab4.5_0002604+View
Nicotiana tabacumNitab4.5_0000241g0230Small GTPase superfamily, Small GTPase superfamily, Rho type, Ran GTPase, Small GTPase superfamily, Rab type, Small GTPase superfamily, Ras type, Small GTP-binding protein domain, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, ARF typeNitab4.5_0000241+View
Olea europaeaOeu056634.1chr18+View
Petunia axillarisPeaxi162Scf00569g00528RAB GTPase homolog A3Peaxi162Scf00569-View
Petunia axillarisPeaxi162Scf00381g00610RAB GTPase homolog A3Peaxi162Scf00381-View
Punica granatumPGR102G0139NC_045129.1-View
Punica granatumPGR004G1053NC_045131.1+View
Prunus persicaPrupe.6G191600K07904 - Ras-related protein Rab-11A (RAB11A)Pp06+View
Pisum sativumPsat7g057080Ras familychr7LG7-View
Papaver somniferumPSO541G0824NC_039363.1-View
Populus trichocarpaPotri.005G073000K07904 - Ras-related protein Rab-11A (RAB11A)Chr05-View
Populus trichocarpaPotri.007G096000K07904 - Ras-related protein Rab-11A (RAB11A)Chr07+View
Phaseolus vulgarisPhvul.001G253300K07904 - Ras-related protein Rab-11A (RAB11A)Chr01+View
Phaseolus vulgarisPhvul.002G261400K07904 - Ras-related protein Rab-11A (RAB11A)Chr02-View
Quercus lobataQL06p0483176-View
Rosa chinensisRcHm_v2.0_Chr2g0112511RcHm_v2.0_Chr2-View
Rhododendron simsiiRhsim10G0166800chr10+View
Striga asiaticaSGA_v2.0_scaffold108G30885scaffold108+View
Striga asiaticaSGA_v2.0_scaffold195G40797scaffold195+View
Striga asiaticaSGA_v2.0_scaffold335G49104scaffold335-View
Salix brachistaSabra07G0079100GWHAAZH00000007+View
Simmondsia chinensisSc23g0001980GWHAASQ00000023-View
Simmondsia chinensisSc03g0000090GWHAASQ00000003+View
Sechium eduleSed0016047LG14-View
Sechium eduleSed0027141LG10-View
Schrenkiella parvulaSp6g33100K07904 - Ras-related protein Rab-11A (RAB11A)ch6-6-View
Schrenkiella parvulaSp7g35880PTHR24073//PTHR24073:SF517 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA4B-RELATEDch7-6-View
Solanum pennelliiSopen04g006290Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco), RAB GTPase homolog A4A (RABA4a) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4BSpenn-ch04-View
Solanum pennelliiSopen11g004900Ras-related protein Rab11D - Nicotiana tabacum (Common tobacco), RAB GTPase homolog A4A (RABA4a) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4BSpenn-ch11+View
Solanum tuberosumPGSC0003DMG400016224NtRab11DST4.03ch11-View
Solanum tuberosumPGSC0003DMG400007223GTP-binding proteinST4.03ch05-View
Solanum tuberosumPGSC0003DMG400023588NtRab11DST4.03ch04-View
Selenicereus undatusHund16562Scaffold_33677-View
Selenicereus undatusHund14108Scaffold_33679-View
Trochodendron aralioidesTAR628G0817group5+View
Trochodendron aralioidesTAR376G0398group14+View
Trochodendron aralioidesTAR381G1339group11-View
Theobroma cacaoThecc.01G097000RAB GTPase A4AChromosome_1-View
Tarenaya hasslerianaTHA.LOC104807693ras-related protein RABH1dNW_010963495.1-View
Tarenaya hasslerianaTHA.LOC104798856ras-related protein RABA4aNW_010960188.1-View
Tarenaya hasslerianaTHA.LOC104819297ras-related protein RABH1eNW_010966177.1-View
Tarenaya hasslerianaTHA.LOC104801674ras-related protein RABA4a-likeNW_010969839.1+View
Tarenaya hasslerianaTHA.LOC104824883ras-related protein RABA4bNW_010966933.1+View
Trifolium pratenseTPR.G6265Tp57577_TGAC_v2_LG3-View
Trifolium pratenseTPR.G16009Tp57577_TGAC_v2_LG2-View
Tripterygium wilfordiiTWI74G1011NC_052234.1-View
Tripterygium wilfordiiTWI77G0267NC_052236.1-View
Utricularia gibbaunitig_899.g14552unitig_899+View
Vaccinium macrocarponvmacro12975Similar to RAB11D: Ras-related protein Rab11D (Nicotiana tabacum OX%3D4097)chr11_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo0251G0258CM024069.1-View
Vigna mungoVMungo1383G2353CM024070.1+View
Vitis viniferaGSVIVG01003415001chr7+View
Vitis viniferaGSVIVG01006975001chrUn+View