Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG3G2970LG-3+View
Acer truncatumAtru.chr12.847chr12+View
Actinidia chinensisActinidia38869Lachesis_group17-View
Arabidopsis lyrataAL3G21720scaffold_3+View
Avicennia marinaMSTRG.9149ScioBoG_11560_HRSCAF_11609-View
Aquilegia oxysepalaAqoxy1G01138CHR01-View
Arabidopsis thalianaAT3G10390protein FLOWERING locus D-like protein Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin%2C up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. FLOWERING LOCUS D (FLD)%3B FUNCTIONS IN: primary amine oxidase activity%3B INVOLVED IN: vegetative to reproductive phase transition of meristem%2C positive regulation of flower development%2C histone deacetylation%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937)%2C SWIRM (InterPro:IPR007526)%3B BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1)%3B Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35%3B Bacteria - 2778%3B Metazoa - 1469%3B Fungi - 560%3B Plants - 667%3B Viruses - 0%3B Other Eukaryotes - 1124 (source: NCBI BLink).Chr3+View
Camellia sinensis var. sinensisCSS0003817PREDICTED: protein FLOWERING LOCUS D isoform X1 [Vitis vinifera]Chr1-View
Capsicum annuumCAN.G321.59PGAv.1.6.scaffold321-View
Cannabis sativaCANSAT56G1841NC_044371.1+View
Corylus avellanaHaze_16741Similar to FLD: Protein FLOWERING LOCUS D (Arabidopsis thaliana OX%3D3702)11+View
Coffea canephoraCc02_g10900Lysine-specific histone demethylase 1 homolog 3chr2-View
Citrus clementinaCiclev10030820m.gscaffold_4+View
Carpinus fangianaCfa001807Cfa01-View
Cardamine hirsutaCARHR084870Lysine-specific histone demethylase 1Chr3+View
Carya illinoinensisCiPaw.02G172000PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Chr02-View
Citrullus lanatusClCG08G007730Lysine-specific histone demethylase 1-3-like proteinCG_Chr08+View
Cucumis meloMELO3C019826.2Lysine-specific histone demethylase 1-like proteinchr03-View
Capsella rubellaCarub.0003s0957PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3scaffold_3+View
Cucumis sativus L.CsaV3_6G036720Lysine-specific histone demethylase 1-like proteinchr6+View
Daucus carotaDCAR_006413hypothetical proteinDCARv2_Chr2-View
Davidia involucrataDinv36390GWHABJS00000009+View
Davidia involucrataDinv31235GWHABJS00000004-View
Durio zibethinusDuzib114G0428NW_019167926.1+View
Erigeron canadensisECA233G3538Conyza_canadensis_scaffold:1+View
Eucalyptus grandisEucgr.G02868Chr07-View
Erythranthe guttataMigut.F01954scaffold_6-View
Eutrema salsugineumThhalv10020007m.gPTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3scaffold_13-View
Fragaria x ananassaFAN03G3029K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)Fvb7-3+View
Fragaria x ananassaFAN01G1111K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)Fvb7-4+View
Fragaria x ananassaFAN06G2076K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)Fvb7-2-View
Fragaria x ananassaFAN06G2768K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)Fvb7-2-View
Fragaria x ananassaFAN10G3101PF01593//PF04433//PF13450 - Flavin containing amine oxidoreductase (Amino_oxidase) // SWIRM domain (SWIRM) // NAD(P)-binding Rossmann-like domain (NAD_binding_8)Fvb7-1-View
Fragaria vescaFvH4_7g18750PTHR10742//PTHR10742:SF260 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Fvb7-View
Gossypium hirsutumGohir.A06G168200K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)A06+View
Glycine maxGlyma.02G159100PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Gm02-View
Gossypium raimondiiGorai.010G206000Chr10+View
Helianthus annuusHanXRQChr08g0218521Probable flavin containing amine oxidoreductase family proteinHanXRQChr08-View
Hydrangea macrophyllaHma1.2p1_0145F.1_g065380Hma1.2p1_0145F.1-View
Lupinus albusLalb_Chr03g0036221PTHR10742//PTHR10742:SF260 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Lalb_Chr03+View
Lonicera japonicaLj2C21G5GWHAAZE00000002+View
Lactuca sativaLsat_1_v5_gn_8_20820Lsat_1_v8_lg_8-View
Malus domesticaMD07G1169700Flavin containing amine oxidoreductase family proteinChr07-View
Malus domesticaMD01G1103000Flavin containing amine oxidoreductase family proteinChr01-View
Manihot esculentaManes.10G050300Chromosome10+View
Nelumbo nuciferaNn6g35273chr6-View
Nicotiana tabacumNitab4.5_0001450g0110Homeodomain-like, SWIRM domain, Amine oxidase, NAD(P)-binding domain, Winged helix-turn-helix DNA-binding domainNitab4.5_0001450+View
Olea europaeaOeu013842.1chr13+View
Punica granatumPGR142G1866NC_045128.1-View
Prunus persicaPrupe.2G208600PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Pp02-View
Papaver somniferumPSO063G5841NC_039364.1+View
Papaver somniferumPSO339G0701NC_039366.1+View
Populus trichocarpaPotri.010G227200PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Chr10+View
Populus trichocarpaPotri.008G035200PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3Chr08-View
Quercus lobataQL08p0543008-View
Rosa chinensisRcHm_v2.0_Chr1g0362561RcHm_v2.0_Chr1-View
Rhododendron simsiiRhsim09G0148200chr09-View
Striga asiaticaSGA_v2.0_scaffold62G21385scaffold62-View
Salvia bowleyanaSalBow4G1586GWHASIU00000008+View
Salix brachistaSabra08G0023500GWHAAZH00000008-View
Salix brachistaSabra10G0175300GWHAAZH00000010+View
Sechium eduleSed0015646LG03-View
Sapria himalayanaSHI08884scaffold9_16683904+View
Schrenkiella parvulaSp3g08660PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3ch3-1+View
Solanum tuberosumPGSC0003DMG400023479Amine oxidaseST4.03ch05+View
Solanum tuberosumPGSC0003DMG400007432Amine oxidaseST4.03ch11+View
Trochodendron aralioidesTAR623G0154group7+View
Theobroma cacaoThecc.10G083900Flavin containing amine oxidoreductase family proteinChromosome_10+View
Tarenaya hasslerianaTHA.LOC104816428protein FLOWERING LOCUS DNW_010965775.1+View
Tripterygium wilfordiiTWI38G0024NC_052252.1-View
Vitis viniferaGSVIVG01016218001chr13+View