Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr8.1764chr8-View
Acer truncatumAtru.chr12.874chr12+View
Actinidia chinensisActinidia03846Lachesis_group17-View
Arabidopsis lyrataAL6G13910scaffold_6+View
Avicennia marinaMSTRG.8127ScioBoG_102841_HRSCAF_103114-View
Avicennia marinaMSTRG.9145ScioBoG_11560_HRSCAF_11609-View
Amaranthus hybridusAh.08g211530Glycine-rich RNA-binding protein RZ1C (AtRZ-1C)AmaHy_arrow1_Scaffold_8+View
Aquilegia oxysepalaAqoxy2G01695CHR02-View
Arabidopsis thalianaAT5G04280RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A)%2C AT1G60650 (AtRZ-1b)%2C AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain%3B FUNCTIONS IN: RNA binding%2C zinc ion binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain (TAIR:AT1G60650.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
Brassica napusC03p01930C03+View
Brassica napusA03p01600A03+View
Brassica oleraceaBolC3t12747HC3+View
Brassica rapaBraA03t09534ZA03+View
Camellia sinensis var. sinensisCSS0005536glycine-rich RNA-binding family protein [Populus trichocarpa]Chr7+View
Camellia sinensis var. sinensisCSS0027147glycine-rich RNA-binding family protein [Populus trichocarpa]Chr1-View
Corylus avellanaHaze_16750Similar to RZ1B: Glycine-rich RNA-binding protein RZ1B (Arabidopsis thaliana OX%3D3702)11+View
Coffea canephoraCc02_g10770RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainchr2-View
Citrus clementinaCiclev10032520m.gscaffold_4+View
Cardamine hirsutaCARHR209000RNA-binding proteinChr6-View
Carya illinoinensisCiPaw.02G171600PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4FChr02-View
Carya illinoinensisCiPaw.01G267500KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domainsChr01-View
Citrullus lanatusClCG05G021270Glycine-rich RNA-binding family proteinCG_Chr05+View
Citrullus lanatusClCG08G007820RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain LENGTH=292CG_Chr08+View
Cucumis meloMELO3C019833.2Glycine-rich RNA-binding family proteinchr03-View
Cucumis meloMELO3C012401.2Glycine-rich RNA-binding family proteinchr10+View
Carica papayaCpa.g.sc53.146supercontig_53+View
Capsella rubellaCarub.0006s0323K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)scaffold_6+View
Cucumis sativus L.CsaV3_2G020900Glycine-rich RNA-binding protein likechr2+View
Daucus carotaDCAR_006405hypothetical proteinDCARv2_Chr2-View
Durio zibethinusDuzib128G0911NW_019168481.1+View
Durio zibethinusDuzib114G0897NW_019167926.1+View
Erigeron canadensisECA238G2158Conyza_canadensis_scaffold:6-View
Eucalyptus grandisEucgr.J01044Chr10-View
Erythranthe guttataMigut.F01713scaffold_6+View
Eutrema salsugineumThhalv10015645m.gPF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)scaffold_2+View
Fragaria x ananassaFAN03G0654KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily)Fvb7-3+View
Fragaria x ananassaFAN10G1475KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily)Fvb7-1-View
Fragaria x ananassaFAN10G2862K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)Fvb7-1-View
Fragaria x ananassaFAN01G2622KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily)Fvb7-4+View
Fragaria x ananassaFAN06G5022K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)Fvb7-2-View
Fragaria vescaFvH4_7g18520K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)Fvb7-View
Gossypium hirsutumGohir.D10G209000K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)D10-View
Gossypium hirsutumGohir.A10G201200PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4FA10-View
Gossypium raimondiiGorai.011G235100Chr11-View
Helianthus annuusHanXRQChr14g0456531Probable RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainHanXRQChr14-View
Lupinus albusLalb_Chr03g0036261KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domainsLalb_Chr03+View
Lotus japonicusLj5g0022774K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)chr5-View
Lonicera japonicaLj3A937G87GWHAAZE00000003+View
Lonicera japonicaLj2A22G66GWHAAZE00000002+View
Lactuca sativaLsat_1_v5_gn_2_113200K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)Lsat_1_v8_lg_2-View
Malus domesticaMD07G1168200RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainChr07-View
Malus domesticaMD01G1101500RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainChr01-View
Manihot esculentaManes.10G051200Chromosome10+View
Nelumbo nuciferaNn6g35249chr6-View
Nicotiana tabacumNitab4.5_0001450g0020Zinc finger, CCHC-type, Nucleotide-binding, alpha-beta plait, RNA recognition motif domainNitab4.5_0001450-View
Olea europaeaOeu013852.1chr13+View
Olea europaeaOeu007407.1chr1-View
Petunia axillarisPeaxi162Scf00145g00811RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainPeaxi162Scf00145-View
Petunia axillarisPeaxi162Scf00253g00327Glycine-rich RNA-binding protein 10Peaxi162Scf00253-View
Punica granatumPGR044G1831NC_045134.1-View
Prunus persicaPrupe.2G206800Pp02-View
Papaver somniferumPSO339G1141NC_039366.1+View
Papaver somniferumPSO801G0725NW_020628818.1-View
Populus trichocarpaPotri.010G228700K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)Chr10+View
Populus trichocarpaPotri.008G033000PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4FChr08-View
Quercus lobataQL08p0536338-View
Quercus lobataQL07p0428207-View
Rosa chinensisRcHm_v2.0_Chr1g0362301RcHm_v2.0_Chr1-View
Rhododendron simsiiRhsim03G0115000chr03-View
Salix brachistaSabra08G0021900GWHAAZH00000008-View
Salix brachistaSabra10G0177400GWHAAZH00000010+View
Sechium eduleSed0002426LG07-View
Sechium eduleSed0027411LG03-View
Sechium eduleSed0011758LG01-View
Sechium eduleSed0020000LG06+View
Schrenkiella parvulaSp6g38470K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG)ch6-6-View
Solanum pennelliiSopen11g003980RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleolus | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Zinc finger, CCHC-type | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainSpenn-ch11-View
Solanum pennelliiSopen03g019840RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Zinc finger, CCHC-type | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domainSpenn-ch03+View
Solanum tuberosumPGSC0003DMG400031080Glycine-rich RNA-binding proteinST4.03ch11+View
Trochodendron aralioidesTAR633G1384group2-View
Theobroma cacaoThecc.10G086400RNA-binding family protein with retrovirus zinc finger-like domainChromosome_10+View
Tarenaya hasslerianaTHA.LOC104816430glycine-rich RNA-binding protein RZ1C isoform X1NW_010965775.1+View
Tripterygium wilfordiiTWI15G0746NC_052247.1-View
Tripterygium wilfordiiTWI38G1352NC_052252.1-View
Vitis viniferaGSVIVG01016195001chr13-View