Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG11G5260LG-11+View
Acer truncatumAtru.chr12.885chr12+View
Arabidopsis lyrataAL6G14000scaffold_6+View
Avicennia marinaMSTRG.27497ScioBoG_8578_HRSCAF_8617-View
Aquilegia oxysepalaAqoxy1G01105CHR01-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.KY2C4A3.2.1.142 - Limit dextrinase / R-enzymearahy.Tifrunner.gnm1.Arahy.19-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.MYE0E13.2.1.142 - Limit dextrinase / R-enzymearahy.Tifrunner.gnm1.Arahy.09-View
Arabidopsis thalianaAT5G04360limit dextrinase Encodes an enzyme thought to be involved in the hydrolysis of the %26#945%3B-1%2C6 linkages during starch degradation in seed endosperm. However%2C a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night%2C indicating that more than one isoamylases might be involved in this process. limit dextrinase (LDA)%3B FUNCTIONS IN: limit dextrinase activity%2C pullulanase activity%2C alpha-amylase activity%3B INVOLVED IN: starch biosynthetic process%2C carbohydrate metabolic process%2C starch catabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Alpha-1%2C6-glucosidases%2C pullulanase-type (InterPro:IPR011839)%2C Immunoglobulin E-set (InterPro:IPR014756)%2C Glycoside hydrolase%2C family 13%2C N-terminal (InterPro:IPR004193)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%2C Glycosyl hydrolase%2C family 13%2C catalytic domain (InterPro:IPR006047)%3B BEST Arabidopsis thaliana protein match is: isoamylase 3 (TAIR:AT4G09020.1)%3B Has 6260 Blast hits to 6253 proteins in 1613 species: Archae - 73%3B Bacteria - 5462%3B Metazoa - 45%3B Fungi - 1%3B Plants - 262%3B Viruses - 0%3B Other Eukaryotes - 417 (source: NCBI BLink).Chr5+View
Brassica carinataBcaC06g32141ChrC06+View
Brassica napusA10p31720A10-View
Brassica napusC09p72420C09-View
Brassica oleraceaBolC9t59986HC9-View
Brassica rapaBraA10t45218ZA10-View
Capsicum annuumCAN.G459.26PGAv.1.6.scaffold459-View
Cicer arietinum L.Ca_10444_v3Ca_LG4_v3+View
Corylus avellanaHaze_16761Similar to PU1: Pullulanase 1, chloroplastic (Arabidopsis thaliana OX%3D3702)11+View
Coffea canephoraCc02_g10690Pullulanase 1, chloroplasticchr2-View
Citrus clementinaCiclev10031035m.gscaffold_4+View
Carpinus fangianaCfa001784Cfa01-View
Cardamine hirsutaCARHR208930Pullulanase, putativeChr6-View
Carya illinoinensisCiPaw.01G2664003.2.1.142 - Limit dextrinase / R-enzymeChr01-View
Citrullus lanatusClCG05G021340Glycogen debranching enzymeCG_Chr05+View
Cucumis meloMELO3C034031.2pullulanase 1, chloroplasticchr10+View
Corchorus olitoriusCOL.COLO4_09860hypothetical proteinAWUE01014278.1-View
Carica papayaCpa.g.sc53.156supercontig_53+View
Capsella rubellaCarub.0006s03313.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolasescaffold_6+View
Cucumis sativus L.CsaV3_5G035900Alpha-1,6-glucosidase, pullulanase-type proteinchr5-View
Daucus carotaDCAR_019069hypothetical proteinDCARv2_Chr5-View
Davidia involucrataDinv31247GWHABJS00000004-View
Durio zibethinusDuzib114G0641NW_019167926.1+View
Erigeron canadensisECA238G3613Conyza_canadensis_scaffold:6-View
Eucalyptus grandisEucgr.G02746Chr07-View
Erythranthe guttataMigut.F01920scaffold_6-View
Eutrema salsugineumThhalv10012585m.g3.2.1.142 - Limit dextrinase / R-enzymescaffold_2+View
Fragaria x ananassaFAN10G34743.2.1.142 - Limit dextrinase / R-enzymeFvb7-1-View
Fragaria x ananassaFAN10G16683.2.1.41 - Pullulanase / Pullulan 6-glucanohydrolaseFvb7-1-View
Fragaria x ananassaFAN03G11553.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolaseFvb7-3+View
Fragaria x ananassaFAN01G09903.2.1.142 - Limit dextrinase / R-enzymeFvb7-4+View
Fragaria x ananassaFAN06G06023.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolaseFvb7-2-View
Fragaria vescaFvH4_7g183703.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolaseFvb7-View
Glycine maxGlyma.10G1970003.2.1.142 - Limit dextrinase / R-enzymeGm10+View
Hydrangea macrophyllaHma1.2p1_0117F.1_g056390Hma1.2p1_0117F.1+View
Lotus japonicusLj5g00091893.2.1.142 - Limit dextrinase / R-enzymechr5-View
Lonicera japonicaLj2C23T6GWHAAZE00000002+View
Lactuca sativaLsat_1_v5_gn_2_103740Lsat_1_v8_lg_2+View
Malus domesticaMD07G1166900limit dextrinaseChr07-View
Malus domesticaMD01G1100100limit dextrinaseChr01-View
Manihot esculentaManes.10G051700Chromosome10+View
Medicago truncatulaMedtr1g090693alpha-1,6-glucosidase, pullulanase-type proteinchr1+View
Nelumbo nuciferaNn6g35226chr6-View
Nicotiana tabacumNitab4.5_0004987g0060Alpha-1,6-glucosidases, pullulanase-type, C-terminal, Glycoside hydrolase, family 13, Immunoglobulin E-set, Immunoglobulin-like fold, Glycoside hydrolase, catalytic domain, Glycoside hydrolase, family 13, N-terminal, Glycoside hydrolase, superfamilyNitab4.5_0004987+View
Olea europaeaOeu016301.1scaffold1658-View
Petunia axillarisPeaxi162Scf00982g00216PullulanasePeaxi162Scf00982+View
Prunus persicaPrupe.2G205800Pp02-View
Pisum sativumPsat6g172720Domain of unknown function (DUF3372)chr6LG2-View
Populus trichocarpaPotri.010G2293003.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolaseChr10+View
Phaseolus vulgarisPhvul.007G1394003.2.1.142 - Limit dextrinase / R-enzymeChr07+View
Quercus lobataQL08p0532768-View
Rosa chinensisRcHm_v2.0_Chr1g0362181RcHm_v2.0_Chr1-View
Rhododendron simsiiRhsim09G0146100chr09-View
Salvia bowleyanaSalBow4G3289GWHASIU00000008+View
Salix brachistaSabra10G0177800GWHAAZH00000010+View
Simmondsia chinensisSc06g0002110GWHAASQ00000006+View
Sechium eduleSed0020526LG07-View
Schrenkiella parvulaSp6g383703.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolasech6-6-View
Solanum pennelliiSopen11g003910Encodes an enzyme thought to be involved in the hydrolysis of the, #945, -1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. | limit dextrinase (LDA) | FUNCTIONS IN: limit dextrinase activity, pullulanase activity, alpha-amylase activity | INVOLVED IN: starch biosynthetic process, carbohydrate metabolic process, starch catabolic process | LOCATED IN: chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Alpha-1,6-glucosidases, pullulanase-type , Immunoglobulin E-set , Glycoside hydrolase, family 13, N-terminal , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain | BEST Arabidopsis thaliana protein match is: isoamylase 3Spenn-ch11-View
Trochodendron aralioidesTAR369G0250group18+View
Theobroma cacaoThecc.10G087900Limit dextrinaseChromosome_10+View
Tarenaya hasslerianaTHA.LOC104816441pullulanase 1%2C chloroplasticNW_010965775.1+View
Trifolium pratenseTPR.G37858Tp57577_TGAC_v2_LG1+View
Tripterygium wilfordiiTWI38G1180NC_052252.1-View
Vaccinium macrocarponvmacro10255Similar to PU1: Pullulanase 1, chloroplastic (Arabidopsis thaliana OX%3D3702)chr8_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo0720G1989CM024071.1+View
Vitis viniferaGSVIVG01016183001chr13+View