Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc03g114360.4Poly polymerase (AHRD V3.3 *** A0A2I4EPD4_9ROSI)SL4.0ch03-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG4G10500LG-4+View
Aethionema arabicumAa31LG7G7600LG-7+View
Acer truncatumAtru.chr11.2038chr11-View
Acer truncatumAtru.chr9.2478chr9-View
Actinidia chinensisActinidia19321Lachesis_group1+View
Actinidia chinensisActinidia01703Lachesis_group10+View
Arabidopsis lyrataAL1G37310scaffold_1+View
Arabidopsis lyrataAL2G29810scaffold_2-View
Avicennia marinaMSTRG.590ScioBoG_102831_HRSCAF_103044-View
Aquilegia oxysepalaAqoxy3G01040CHR03-View
Arabidopsis thalianaAT1G23550similar to RCD one 2 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. similar to RCD one 2 (SRO2)%3B FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase%2C catalytic domain (InterPro:IPR012317)%2C RST domain of plant C-terminal (InterPro:IPR022003)%3B BEST Arabidopsis thaliana protein match is: similar to RCD one 3 (TAIR:AT1G70440.1)%3B Has 178 Blast hits to 169 proteins in 16 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 13%3B Fungi - 0%3B Plants - 164%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).Chr1+View
Arabidopsis thalianaAT1G70440similar to RCD one 3 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. similar to RCD one 3 (SRO3)%3B FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity%3B INVOLVED IN: biological_process unknown%3B CONTAINS InterPro DOMAIN/s: RST domain of plant C-terminal (InterPro:IPR022003)%2C Poly(ADP-ribose) polymerase%2C catalytic domain (InterPro:IPR012317)%3B BEST Arabidopsis thaliana protein match is: similar to RCD one 2 (TAIR:AT1G23550.1)%3B Has 176 Blast hits to 165 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 14%3B Fungi - 0%3B Plants - 161%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink).Chr1-View
Brassica carinataBcaC08g46487ChrC08-View
Brassica carinataBcaB03g14803ChrB03-View
Brassica napusA07p36820A07-View
Brassica napusA09p41120A09-View
Brassica napusC05p22890C05+View
Brassica napusC06p44300C06-View
Brassica oleraceaBolC6t39500HC6-View
Brassica oleraceaBolC5t30987HC5+View
Brassica rapaBraA09t39605ZA09-View
Beta vulgarisEL10Ac5g10744PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDChr5_EL10_PGA_scaffold2+View
Camellia sinensis var. sinensisCSS0017926hypothetical protein PRUPE_ppa007712mg [Prunus persica]Chr15+View
Camellia sinensis var. sinensisCSS0018742PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 [Prunus mume]Chr6+View
Corylus avellanaHaze_12186Similar to SRO2: Probable inactive poly polymerase SRO2 (Arabidopsis thaliana OX%3D3702)9-View
Citrus clementinaCiclev10020868m.gscaffold_3-View
Citrus clementinaCiclev10032827m.gscaffold_4+View
Carpinus fangianaCfa009153Cfa03-View
Cardamine hirsutaCARHR063610similar to RCD one 3Chr2-View
Cardamine hirsutaCARHR023980similar to RCD one 2Chr1+View
Carya illinoinensisCiPaw.11G026200PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDChr11+View
Capsella rubellaCarub.0001s2309PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDscaffold_1+View
Capsella rubellaCarub.0002s1713PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDscaffold_2-View
Daucus carotaDCAR_026135hypothetical proteinDCARv2_Chr7-View
Davidia involucrataDinv24842GWHABJS00000018+View
Davidia involucrataDinv20653GWHABJS00000006-View
Durio zibethinusDuzib248G1483NW_019168048.1+View
Durio zibethinusDuzib268G0466NW_019168270.1-View
Erigeron canadensisECA232G4399Conyza_canadensis_scaffold:2-View
Erigeron canadensisECA233G4153Conyza_canadensis_scaffold:1-View
Eutrema salsugineumThhalv10019788m.gPTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDscaffold_9+View
Eutrema salsugineumThhalv10008227m.gPTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDscaffold_5-View
Fragaria x ananassaFAN07G2140PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDFvb4-4-View
Fragaria x ananassaFAN17G1730PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDFvb4-2-View
Fragaria x ananassaFAN12G1661PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDFvb4-3+View
Fragaria x ananassaFAN22G0184PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDFvb4-1+View
Fragaria x ananassaFAN13G2823Fvb5-2-View
Fragaria vescaFvH4_4g34350PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDFvb4+View
Gossypium hirsutumGohir.A12G142900PF12174 - RCD1-SRO-TAF4 (RST) plant domain (RST)A12-View
Gossypium hirsutumGohir.D12G147700PF12174 - RCD1-SRO-TAF4 (RST) plant domain (RST)D12-View
Glycine maxGlyma.04G183100PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDGm04+View
Gossypium raimondiiGorai.008G158900Chr08-View
Lotus japonicusLj4g0011780PTHR32263//PTHR32263:SF6 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDchr4-View
Lonicera japonicaLj3A1053T42GWHAAZE00000003-View
Magnolia biondiiMBI16_g27099_MAGBIOAED:0.11Chr16+View
Malus domesticaMD06G1173800similar to RCD one 5Chr06+View
Malus domesticaMD14G1180300similar to RCD one 5Chr14+View
Malus domesticaMD13G1092800similar to RCD one 2Chr13-View
Malus domesticaMD16G1093700similar to RCD one 2Chr16-View
Manihot esculentaManes.13G029600Chromosome13+View
Medicago truncatulaMedtr3g077870inactive poly [ADP-ribose] polymerase SRO4chr3+View
Nelumbo nuciferaNn3g16865chr3-View
Nicotiana tabacumNitab4.5_0000203g0240Poly(ADP-ribose) polymerase, catalytic domain, RST domain of plant C-terminalNitab4.5_0000203+View
Olea europaeaOeu056405.1chr12+View
Petunia axillarisPeaxi162Scf00710g00414RCD one 5, putative isoform 2Peaxi162Scf00710+View
Prunus persicaPrupe.5G173700PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDPp05+View
Prunus persicaPrupe.1G252800PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDPp01+View
Populus trichocarpaPotri.012G081100PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDChr12-View
Phaseolus vulgarisPhvul.009G178500PTHR32263:SF6 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATEDChr09+View
Rosa chinensisRcHm_v2.0_Chr4g0443761RcHm_v2.0_Chr4+View
Rhododendron simsiiRhsim12G0118200chr12+View
Rhododendron simsiiRhsim12G0044600chr12+View
Salvia bowleyanaSalBow2G2071GWHASIU00000007+View
Salix brachistaSabra15G0101600GWHAAZH00000015-View
Sechium eduleSed0021647LG03+View
Schrenkiella parvulaSp5g25520PTHR32263//PTHR32263:SF8 - FAMILY NOT NAMED // INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDch5-6-View
Schrenkiella parvulaSp1g20990PTHR32263:SF8 - INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO2-RELATEDch1-1+View
Solanum pennelliiSopen03g033460Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. | similar to RCD one 5 (SRO5) | FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity | INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain | BEST Arabidopsis thaliana protein match is: similar to RCD one 4Spenn-ch03-View
Solanum pennelliiSopen05g001280Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. | similar to RCD one 2 (SRO2) | FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity | INVOLVED IN: biological_process unknown | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain , RST domain of plant C-terminal | BEST Arabidopsis thaliana protein match is: similar to RCD one 3Spenn-ch05-View
Solanum tuberosumPGSC0003DMG400024600Conserved gene of unknown functionST4.03ch03-View
Solanum tuberosumPGSC0003DMG400013476Conserved gene of unknown functionST4.03ch05+View
Trochodendron aralioidesTAR629G2674group0-View
Trochodendron aralioidesTAR374G0978group12-View
Trochodendron aralioidesTAR622G1404group8-View
Trochodendron aralioidesTAR371G0407group13+View
Theobroma cacaoThecc.02G251100RCD one 2Chromosome_2-View
Theobroma cacaoThecc.03G012700RCD one 5Chromosome_3-View
Tarenaya hasslerianaTHA.LOC104822148probable inactive poly [ADP-ribose] polymerase SRO2NW_010966617.1-View
Vaccinium macrocarponvmacro16246Similar to SRO2: Probable inactive poly polymerase SRO2 (Arabidopsis thaliana OX%3D3702)chr4_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro01167Similar to SRO2: Probable inactive poly polymerase SRO2 (Arabidopsis thaliana OX%3D3702)chr1_Vaccinium_macrocarpon_Stevens_v1+View
Vitis viniferaGSVIVG01013740001chr1+View