Anchorpoints
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG1G160 | LG-1 | + | View | |
| Acer truncatum | Atru.chr11.635 | chr11 | - | View | |
| Actinidia chinensis | Actinidia36644 | Lachesis_group4 | - | View | |
| Actinidia chinensis | Actinidia12376 | Lachesis_group14 | + | View | |
| Arabidopsis lyrata | AL1G26930 | scaffold_1 | - | View | |
| Arabidopsis lyrata | AL5G10700 | scaffold_5 | + | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.RIX96U | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
| Arabidopsis thaliana | AT1G14900 | high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A (HMGA)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C nucleosome assembly%3B LOCATED IN: cytosol%2C nuclear chromatin%2C nucleus%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C A.T hook-like (InterPro:IPR020478)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%2C High mobility group%2C HMG-I/HMG-Y (InterPro:IPR000116)%2C Histone H1/H5 (InterPro:IPR005818)%3B BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1)%3B Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0%3B Bacteria - 119%3B Metazoa - 428%3B Fungi - 179%3B Plants - 544%3B Viruses - 9%3B Other Eukaryotes - 98 (source: NCBI BLink). | Chr1 | - | View |
| Brassica carinata | BcaC06g31289 | ChrC06 | - | View | |
| Brassica carinata | BcaB07g30386 | ChrB07 | - | View | |
| Brassica carinata | BcaB07g30729 | ChrB07 | - | View | |
| Brassica carinata | BcaC03g17058 | ChrC03 | + | View | |
| Brassica carinata | BcaC06g34144 | ChrC06 | - | View | |
| Brassica napus | A06p44250 | A06 | - | View | |
| Brassica napus | C07p32220 | C07 | + | View | |
| Brassica napus | A02p32200 | A02 | + | View | |
| Brassica napus | A09p23550 | A09 | + | View | |
| Brassica oleracea | BolC7t43761H | C7 | + | View | |
| Brassica oleracea | BolC2t11057H | C2 | + | View | |
| Brassica rapa | BraA02t08234Z | A02 | + | View | |
| Brassica rapa | BraA09t37957Z | A09 | + | View | |
| Camellia sinensis var. sinensis | CSS0028232 | hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] | Chr6 | + | View |
| Camellia sinensis var. sinensis | CSS0002727 | hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] | Chr12 | - | View |
| Cannabis sativa | CANSAT01G0504 | NC_044373.1 | - | View | |
| Corylus avellana | Haze_10937 | Similar to HMGA: HMG-Y-related protein A (Arabidopsis thaliana OX%3D3702) | 9 | - | View |
| Corylus avellana | Haze_14260 | Similar to HMG-Y-related protein A (Glycine max OX%3D3847) | 5 | + | View |
| Coffea canephora | Cc11_g08210 | HMG-Y-related protein A | chr11 | - | View |
| Citrus clementina | Ciclev10012880m.g | scaffold_6 | + | View | |
| Citrus clementina | Ciclev10016374m.g | scaffold_2 | + | View | |
| Ceratophyllum demersum | CDE11G0143 | 9 | + | View | |
| Ceratophyllum demersum | CDE05G0212 | 3 | - | View | |
| Ceratophyllum demersum | CDE05G1722 | 3 | - | View | |
| Carpinus fangiana | Cfa007815 | Cfa03 | - | View | |
| Carpinus fangiana | Cfa014986 | Cfa06 | + | View | |
| Cardamine hirsuta | CARHR015440 | high mobility group A | Chr1 | - | View |
| Cardamine hirsuta | CARHR144160 | High mobility group protein I/Y | Chr5 | + | View |
| Carya illinoinensis | CiPaw.05G193400 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr05 | - | View |
| Carya illinoinensis | CiPaw.03G071700 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr03 | + | View |
| Carya illinoinensis | CiPaw.06G049000 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr06 | + | View |
| Carya illinoinensis | CiPaw.04G047300 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr04 | + | View |
| Citrullus lanatus | ClCG01G006370 | High-mobility-group family protein | CG_Chr01 | + | View |
| Capsella rubella | Carub.0005s0055 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | scaffold_5 | + | View |
| Capsella rubella | Carub.0001s1468 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | scaffold_1 | - | View |
| Cucumis sativus L. | CsaV3_5G028310 | HMG-Y-related protein A | chr5 | - | View |
| Daucus carota | DCAR_007316 | hypothetical protein | DCARv2_Chr2 | + | View |
| Daucus carota | DCAR_030245 | hypothetical protein | DCARv2_Chr9 | + | View |
| Davidia involucrata | Dinv28206 | GWHABJS00000012 | - | View | |
| Davidia involucrata | Dinv28051 | GWHABJS00000008 | - | View | |
| Durio zibethinus | Duzib268G0926 | NW_019168270.1 | + | View | |
| Durio zibethinus | Duzib211G0031 | NW_019168049.1 | - | View | |
| Durio zibethinus | Duzib251G0855 | NW_019167971.1 | + | View | |
| Durio zibethinus | Duzib133G0405 | NW_019167938.1 | - | View | |
| Eucalyptus grandis | Eucgr.B02941 | Chr02 | - | View | |
| Eucalyptus grandis | Eucgr.J01599 | Chr10 | + | View | |
| Erythranthe guttata | Migut.L00405 | scaffold_12 | - | View | |
| Eutrema salsugineum | Thhalv10004909m.g | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | scaffold_6 | - | View |
| Eutrema salsugineum | Thhalv10008756m.g | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | scaffold_5 | + | View |
| Fragaria x ananassa | FAN07G1995 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Fvb4-4 | + | View |
| Fragaria vesca | FvH4_4g34011 | Fvb4 | - | View | |
| Gossypium hirsutum | Gohir.D12G154900 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | D12 | + | View |
| Gossypium hirsutum | Gohir.A12G151200 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | A12 | + | View |
| Glycine max | Glyma.02G245000 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Gm02 | + | View |
| Glycine max | Glyma.18G040200 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Gm18 | + | View |
| Gossypium raimondii | Gorai.008G167300 | Chr08 | + | View | |
| Helianthus annuus | HanXRQChr15g0476791 | Putative winged helix-turn-helix DNA-binding domain; AT hook-like | HanXRQChr15 | - | View |
| Hydrangea macrophylla | Hma1.2p1_0158F.1_g070210 | Hma1.2p1_0158F.1 | - | View | |
| Lotus japonicus | Lj6g0005170 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | chr6 | + | View |
| Lonicera japonica | Lj6P742T14 | GWHAAZE00000006 | + | View | |
| Lonicera japonica | Lj3C866T11 | GWHAAZE00000003 | - | View | |
| Lactuca sativa | Lsat_1_v5_gn_8_44400 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_8 | + | View |
| Lactuca sativa | Lsat_1_v5_gn_2_69361 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_2 | - | View |
| Lactuca sativa | Lsat_1_v5_gn_3_55821 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_3 | + | View |
| Malus domestica | MD16G1022400 | high mobility group A | Chr16 | - | View |
| Malus domestica | MD09G1263200 | high mobility group A | Chr09 | - | View |
| Malus domestica | MD13G1021100 | high mobility group A | Chr13 | - | View |
| Manihot esculenta | Manes.17G080900 | Chromosome17 | + | View | |
| Manihot esculenta | Manes.01G118200 | Chromosome01 | + | View | |
| Manihot esculenta | Manes.02G076600 | Chromosome02 | + | View | |
| Manihot esculenta | Manes.15G131700 | Chromosome15 | + | View | |
| Nelumbo nucifera | Nn3g18299 | chr3 | + | View | |
| Nicotiana tabacum | Nitab4.5_0000916g0110 | Linker histone H1/H5, domain H15, AT hook, DNA-binding motif, AT hook-like, Winged helix-turn-helix DNA-binding domain | Nitab4.5_0000916 | - | View |
| Olea europaea | Oeu062635.1 | chr11 | - | View | |
| Petunia axillaris | Peaxi162Scf00723g00045 | high mobility group A | Peaxi162Scf00723 | + | View |
| Punica granatum | PGR102G2096 | NC_045129.1 | - | View | |
| Punica granatum | PGR004G0693 | NC_045131.1 | - | View | |
| Prunus persica | Prupe.1G330600 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Pp01 | + | View |
| Populus trichocarpa | Potri.004G087500 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr04 | - | View |
| Populus trichocarpa | Potri.010G109600 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr10 | - | View |
| Populus trichocarpa | Potri.008G132400 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr08 | + | View |
| Phaseolus vulgaris | Phvul.001G230300 | PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | Chr01 | - | View |
| Quercus lobata | QL03p034015 | 3 | + | View | |
| Quercus lobata | QL02p058120 | CM012294 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr4g0443521 | RcHm_v2.0_Chr4 | - | View | |
| Rhododendron simsii | Rhsim09G0093400 | chr09 | - | View | |
| Salvia bowleyana | SalBow8G3625 | GWHASIU00000004 | + | View | |
| Salix brachista | Sabra08G0101000 | GWHAAZH00000008 | + | View | |
| Salix brachista | Sabra10G0080100 | GWHAAZH00000010 | - | View | |
| Salix brachista | Sabra17G0107800 | GWHAAZH00000017 | + | View | |
| Sechium edule | Sed0021324 | LG03 | - | View | |
| Sechium edule | Sed0022114 | LG11 | - | View | |
| Sechium edule | Sed0026446 | LG06 | + | View | |
| Schrenkiella parvula | Sp2g13050 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | ch2-4 | + | View |
| Schrenkiella parvula | Sp1g13340 | PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED | ch1-1 | - | View |
| Solanum pennellii | Sopen04g003030 | Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. | high mobility group A (HMGA) | FUNCTIONS IN: DNA binding | INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly | LOCATED IN: cytosol, nuclear chromatin, nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , A.T hook-like , AT hook, DNA-binding motif , High mobility group, HMG-I/HMG-Y , Histone H1/H5 | BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein | Spenn-ch04 | + | View |
| Solanum tuberosum | PGSC0003DMG400029519 | High mobility group family | ST4.03ch04 | + | View |
| Selenicereus undatus | Hund24960 | Scaffold_3410 | - | View | |
| Trochodendron aralioides | TAR371G1156 | group13 | - | View | |
| Trochodendron aralioides | TAR622G1368 | group8 | - | View | |
| Trochodendron aralioides | TAR374G1087 | group12 | + | View | |
| Trochodendron aralioides | TAR629G1426 | group0 | + | View | |
| Theobroma cacao | Thecc.04G115000 | High mobility group A | Chromosome_4 | - | View |
| Theobroma cacao | Thecc.02G288200 | Chromosome_2 | + | View | |
| Tarenaya hassleriana | THA.LOC104805075 | HMG-Y-related protein A-like | NW_010961290.1 | + | View |
| Tarenaya hassleriana | THA.LOC104824134 | HMG-Y-related protein A-like | NW_010966881.1 | - | View |
| Tripterygium wilfordii | TWI74G0932 | NC_052234.1 | + | View | |
| Tripterygium wilfordii | TWI74G0359 | NC_052234.1 | - | View | |
| Tripterygium wilfordii | TWI77G0347 | NC_052236.1 | + | View | |
| Vaccinium macrocarpon | vmacro10672 | Similar to HMGA: HMG-Y-related protein A (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vitis vinifera | GSVIVG01011701001 | chr1 | + | View |