Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g021235.1Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *-* A0A1U8FCX0_CAPAN)SL4.0ch02-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrataAL4G30340scaffold_4+View
Amaranthus hybridusAh.07g204930AmaHy_arrow1_Scaffold_7+View
Aquilegia oxysepalaAqoxy4G00106CHR04-View
Arabidopsis thalianaAT2G34370Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G29710.1)%3B Has 20194 Blast hits to 10208 proteins in 162 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 12%3B Fungi - 23%3B Plants - 20031%3B Viruses - 0%3B Other Eukaryotes - 128 (source: NCBI BLink).Chr2+View
Brassica rapaBraA03t13635ZA03+View
Brassica rapaBraA06t27458ZA06-View
Brassica rapaBraA05t20073ZA05-View
Corylus avellanaHaze_13549Similar to PCMP-E95: Pentatricopeptide repeat-containing protein At3g22150, chloroplastic (Arabidopsis thaliana OX%3D3702)5+View
Coffea canephoraCc00_g30210Mannan endo-1,4-beta-mannosidase 5chr0+View
Cardamine hirsutaCARHR128480Pentatricopeptide repeat-containing proteinChr4+View
Citrullus lanatusClCG03G006600Pentatricopeptide repeat proteinCG_Chr03+View
Cucumis meloMELO3C035706.2Pentatricopeptide repeat-containing proteinchr12+View
Carica papayaCpa.g.sc17.169supercontig_17-View
Capsella rubellaCarub.0004s1604PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase)scaffold_4+View
Erigeron canadensisECA236G3780Conyza_canadensis_scaffold:3+View
Eucalyptus grandisEucgr.E02385Chr05-View
Erythranthe guttataMigut.M01869scaffold_13+View
Eutrema salsugineumThhalv10017960m.gPF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase)scaffold_10+View
Fragaria x ananassaFAN11G3040PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)Fvb3-4+View
Gossypium hirsutumGohir.D10G036200PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)D10-View
Gossypium hirsutumGohir.D10G039700K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14)D10+View
Glycine maxGlyma.12G009800PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)Gm12+View
Gossypium raimondiiGorai.011G038100Chr11-View
Gossypium raimondiiGorai.011G041800Chr11+View
Magnolia biondiiMBI10_g21112_MAGBIOAED:0.33Chr10+View
Manihot esculentaManes.17G073400Chromosome17-View
Nelumbo nuciferaNn4g26526chr4-View
Nicotiana tabacumNitab4.5_0001655g0120Pentatricopeptide repeatNitab4.5_0001655-View
Nicotiana tabacumNitab4.5_0001040g0060Pentatricopeptide repeatNitab4.5_0001040-View
Phaseolus vulgarisPhvul.006G162500Chr06+View
Rhododendron simsiiRhsim02G0194600chr02-View
Schrenkiella parvulaSp7g15880K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14)ch7-4+View
Schrenkiella parvulaSp4g16670PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)ch4-6+View
Solanum pennelliiSopen02g019790Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily proteinSpenn-ch02-View
Solanum tuberosumPGSC0003DMG400008304Pentatricopeptide repeat-containing proteinST4.03ch02-View