Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g088790.3RNA-binding protein (AHRD V3.3 *-* Q941H8_SOLTU)SL4.0ch02-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr9.576chr9+View
Actinidia chinensisActinidia18989Lachesis_group9-View
Arabidopsis lyrataAL8G37690scaffold_8+View
Avicennia marinaMSTRG.4475ScioBoG_102837_HRSCAF_103074-View
Avicennia marinaMSTRG.3004ScioBoG_102835_HRSCAF_103059+View
Amaranthus hybridusAh.11g047760AmaHy_arrow1_Scaffold_11+View
Amaranthus hybridusAh.02g114050AmaHy_arrow1_Scaffold_2-View
Aquilegia oxysepalaAqoxy3G03691CHR03+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.JF639KK12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)arahy.Tifrunner.gnm1.Arahy.11-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.NU4VZ9K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)arahy.Tifrunner.gnm1.Arahy.01+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.3U78JAK12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)arahy.Tifrunner.gnm1.Arahy.10+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.ZV83LZK12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)arahy.Tifrunner.gnm1.Arahy.04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.L835I9PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)arahy.Tifrunner.gnm1.Arahy.20+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.I4LFHLKOG0131//KOG4206 - Splicing factor 3b, subunit 4 // Spliceosomal protein snRNP-U1A/U2Barahy.Tifrunner.gnm1.Arahy.14+View
Arabidopsis thalianaAT5G61030glycine-rich RNA-binding protein 3 encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. glycine-rich RNA-binding protein 3 (GR-RBP3)%3B FUNCTIONS IN: RNA binding%2C copper ion binding%2C ATP binding%3B INVOLVED IN: response to cold%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
Amborella trichopodaATR0177G053AmTr_v1.0_scaffold00154-View
Brassica napusA03p46730A03+View
Brassica oleraceaBolC7t45001HC7+View
Beta vulgarisEL10Ac5g11132K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Chr5_EL10_PGA_scaffold2-View
Camellia sinensis var. sinensisCSS0047053unnamed protein product [Vitis vinifera]Chr2+View
Camellia sinensis var. sinensisCSS0025474PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Nicotiana tomentosiformis]Chr15-View
Cicer arietinum L.Ca_04353_v3Ca_LG2_v3-View
Corylus avellanaHaze_07731Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702)4+View
Coffea canephoraCc07_g04200glycine-rich RNA-binding protein 4chr7-View
Citrus clementinaCiclev10019850m.gscaffold_3-View
Carpinus fangianaCfa019340Cfa08+View
Cardamine hirsutaCARHR274740RNA binding protein-like proteinChr8+View
Carya illinoinensisCiPaw.11G053800K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Chr11+View
Citrullus lanatusClCG04G011800Glycine-rich RNA-binding protein, putativeCG_Chr04+View
Citrullus lanatusClCG06G015620glycine-rich RNA-binding protein 3 LENGTH=309CG_Chr06+View
Cucumis meloMELO3C017226.2glycine-rich RNA-binding protein 2, mitochondrial-likechr02+View
Chenopodium quinoaAUR62021558RBG3: Glycine-rich RNA-binding protein 3, mitochondrialC_Quinoa_Scaffold_1675+View
Capsella rubellaCarub.0008s2172K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)scaffold_8+View
Daucus carotaDCAR_025429hypothetical proteinDCARv2_Chr7-View
Davidia involucrataDinv34942GWHABJS00000012+View
Davidia involucrataDinv17415GWHABJS00000006+View
Davidia involucrataDinv22779GWHABJS00000019+View
Durio zibethinusDuzib205G0103NW_019168381.1-View
Durio zibethinusDuzib068G0605NW_019167838.1-View
Durio zibethinusDuzib084G1323NW_019167827.1-View
Erigeron canadensisECA246G1030Conyza_canadensis_scaffold:8-View
Eucalyptus grandisEucgr.B00593Chr02-View
Eucalyptus grandisEucgr.I02029Chr09-View
Erythranthe guttataMigut.H00627scaffold_8+View
Fragaria x ananassaFAN13G3109KOG0110//KOG0123//KOG0131//KOG0145 - RNA-binding protein (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily)Fvb5-2+View
Fragaria x ananassaFAN18G0068K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Fvb5-1+View
Fragaria x ananassaFAN08G1191PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)Fvb5-3-View
Gossypium hirsutumGohir.A03G070100K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)A03-View
Gossypium hirsutumGohir.D03G096650K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)D03-View
Glycine maxGlyma.18G266500K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Gm18-View
Glycine maxGlyma.17G078400K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Gm17-View
Glycine maxGlyma.05G020900K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Gm05+View
Glycine maxGlyma.08G245200K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Gm08-View
Gossypium raimondiiGorai.003G101300Chr03-View
Lupinus albusLalb_Chr13g0302851K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Lalb_Chr13+View
Lotus japonicusLj4g0010980K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)chr4+View
Lotus japonicusLj1g0019157K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)chr1+View
Lonicera japonicaLju41C3T3GWHAAZE00000094+View
Lonicera japonicaLj4P118T46GWHAAZE00000004-View
Malus domesticaMD06G1225200glycine-rich RNA-binding protein 3Chr06-View
Manihot esculentaManes.14G085900Chromosome14-View
Manihot esculentaManes.06G084600Chromosome06+View
Medicago truncatulaMedtr7g013730RNA-binding (RRM/RBD/RNP motif) family proteinchr7-View
Nelumbo nuciferaNn4g23429chr4-View
Nelumbo nuciferaNn3g17452chr3-View
Nicotiana tabacumNitab4.5_0000212g0240RNA recognition motif domain, Nucleotide-binding, alpha-beta plaitNitab4.5_0000212-View
Oryza sativa ssp. japonicaOs07g0602600Similar to RNA binding protein.chr07-View
Petunia axillarisPeaxi162Scf00991g00324glycine-rich RNA-binding protein 3Peaxi162Scf00991+View
Petunia axillarisPeaxi162Scf00166g00525glycine-rich RNA-binding protein 3Peaxi162Scf00166+View
Punica granatumPGR004G2423NC_045131.1+View
Prunus persicaPrupe.5G205300K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Pp05-View
Pisum sativumPsat3g201880RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain)chr3LG5+View
Populus trichocarpaPotri.015G057400K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Chr15+View
Phaseolus vulgarisPhvul.008G033500K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Chr08+View
Phaseolus vulgarisPhvul.003G184700K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3)Chr03+View
Quercus lobataQL10p01954410-View
Rhododendron simsiiRhsim10G0048900chr10-View
Rhododendron simsiiRhsim12G0148300chr12-View
Striga asiaticaSGA_v2.0_scaffold58G20528scaffold58-View
Striga asiaticaSGA_v2.0_scaffold4G02396scaffold4+View
Salvia bowleyanaSalBow1G3075GWHASIU00000001-View
Salix brachistaSabra15G0082700GWHAAZH00000015+View
Sechium eduleSed0009863LG01+View
Sechium eduleSed0010111LG08-View
Sechium eduleSed0000437LG12-View
Solanum pennelliiSopen02g016120encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. | glycine-rich RNA-binding protein 3 (GR-RBP3) | FUNCTIONS IN: RNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5Spenn-ch02+View
Solanum pennelliiSopen02g033510encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. | glycine-rich RNA-binding protein 3 (GR-RBP3) | FUNCTIONS IN: RNA binding, copper ion binding, ATP binding | INVOLVED IN: response to cold | LOCATED IN: mitochondrion | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5Spenn-ch02-View
Solanum tuberosumPGSC0003DMG400001453RNA-binding proteinST4.03ch02+View
Solanum tuberosumPGSC0003DMG400025154RNA-binding glycine-rich proteinST4.03ch02+View
Selenicereus undatusHund13147Scaffold_33679+View
Trochodendron aralioidesTAR374G1610group12-View
Trochodendron aralioidesTAR622G1403group8+View
Theobroma cacaoThecc.03G102000Chromosome_3-View
Tarenaya hasslerianaTHA.LOC104801196glycine-rich RNA-binding protein 3%2C mitochondrial-like isoform X1NW_010960188.1+View
Tarenaya hasslerianaTHA.LOC104818345glycine-rich RNA-binding protein 3%2C mitochondrial-likeNW_010966092.1-View
Trifolium pratenseTPR.G2000Tp57577_TGAC_v2_LG5+View
Trifolium pratenseTPR.G33472Tp57577_TGAC_v2_LG6+View
Utricularia gibbaunitig_52.g17639unitig_52+View
Vaccinium macrocarponvmacro05633Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702)chr12_Vaccinium_macrocarpon_Stevens_v1-View
Vaccinium macrocarponvmacro16494Similar to RBG3: Glycine-rich RNA-binding protein 3, mitochondrial (Arabidopsis thaliana OX%3D3702)chr4_Vaccinium_macrocarpon_Stevens_v1-View
Vaccinium macrocarponvmacro17489Similar to Glycine-rich RNA-binding protein (Daucus carota OX%3D4039)chr3_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1215G1468CM024074.1-View
Vigna mungoVMungo1383G2084CM024070.1+View
Zea maysZm00001eb326870Zm00001e035491 Glycine-rich RNA-binding protein 3 mitochondrial7-View