Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG11G13780LG-11+View
Acer truncatumAtru.chr8.654chr8-View
Actinidia chinensisActinidia17603Lachesis_group21+View
Actinidia chinensisActinidia19427Lachesis_group0-View
Arabidopsis lyrataAL6G26640scaffold_6-View
Avicennia marinaMSTRG.2976ScioBoG_102835_HRSCAF_103059-View
Avicennia marinaMSTRG.23858ScioBoG_3895_HRSCAF_3912-View
Amaranthus hybridusAh.16g101060Agamous-like MADS-box protein AGL8 homolog (TM4)AmaHy_arrow1_Scaffold_16-View
Amaranthus hybridusAh.10g038170Agamous-like MADS-box protein AGL8 homolog (POTM1-1)AmaHy_arrow1_Scaffold_10+View
Aquilegia oxysepalaAqoxy3G00538CHR03+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.F55D38PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.20+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.AK1FA2PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATEDarahy.Tifrunner.gnm1.Arahy.11+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.7JHN4JPTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.04+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.438FZBPTHR11945//PTHR11945:SF166 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.01-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.XV7G96PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.14+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.C2BNNJPTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.10+View
Arabidopsis thalianaAT5G15800K-box region and MADS-box transcription factor family protein Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. SEPALLATA1 (SEP1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: flower development%2C ovule development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).Chr5-View
Arabidopsis thalianaAT3G30260AGAMOUS-like 79 AGAMOUS-like 79 (AGL79)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1)%3B Has 7337 Blast hits to 7335 proteins in 920 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 637%3B Fungi - 301%3B Plants - 6322%3B Viruses - 0%3B Other Eukaryotes - 75 (source: NCBI BLink).Chr3+View
Brassica carinataBcaC04g23814ChrC04-View
Brassica carinataBcaB01g05026ChrB01+View
Brassica carinataBcaC06g30851ChrC06-View
Brassica napusC09p04390C09+View
Brassica napusA02p36990A02+View
Brassica napusA03p07360A03-View
Brassica napusC09p61300C09+View
Brassica napusA10p23230A10+View
Brassica napusA09p04170A09+View
Brassica napusC02p56000C02+View
Brassica rapaBraA03t10060ZA03-View
Brassica rapaBraA02t08686ZA02+View
Brassica rapaBraA10t44391ZA10+View
Beta vulgarisEL10Ac2g04444PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDChr2_EL10_PGA_scaffold6+View
Beta vulgarisEL10Ac5g11176PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATEDChr5_EL10_PGA_scaffold2+View
Camellia sinensis var. sinensisCSS0043333SEP1 [Actinidia chinensis]Chr2+View
Camellia sinensis var. sinensisCSS0048771PREDICTED: MADS-box transcription factor 23-like isoform X2 [Nelumbo nucifera]Chr1+View
Capsicum annuumCAN.G497.73PGAv.1.6.scaffold497-View
Capsicum annuumCAN.G93.50PGAv.1.6.scaffold93-View
Cannabis sativaCANSAT64G0107NC_044379.1-View
Corylus avellanaHaze_19826Similar to AGL18: Agamous-like MADS-box protein AGL18 (Arabidopsis thaliana OX%3D3702)10+View
Corylus avellanaHaze_14384Similar to Agamous-like MADS-box protein AGL8 homolog (Solanum tuberosum OX%3D4113)5-View
Coffea canephoraCc07_g04440Developmental protein SEPALLATA 2chr7+View
Citrus clementinaCiclev10012593m.gscaffold_6+View
Citrus clementinaCiclev10021357m.gscaffold_3+View
Ceratophyllum demersumCDE04G00682+View
Carpinus fangianaCfa010822Cfa04-View
Carpinus fangianaCfa007692Cfa03+View
Cardamine hirsutaCARHR197530MADS-box transcription factorChr6+View
Carya illinoinensisCiPaw.04G052300PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDChr04-View
Carya illinoinensisCiPaw.03G083300PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDChr03-View
Citrullus lanatusClCG07G016020MADS-box transcription factorCG_Chr07+View
Chenopodium quinoaAUR62032127Protein of unknown functionC_Quinoa_Scaffold_1177+View
Chenopodium quinoaAUR62009485SEP2: Developmental protein SEPALLATA 2C_Quinoa_Scaffold_3674-View
Chenopodium quinoaAUR62023102AGL15: Agamous-like MADS-box protein AGL15C_Quinoa_Scaffold_1189-View
Chenopodium quinoaAUR62023162Agamous-like MADS-box protein AGL8 homologC_Quinoa_Scaffold_1189-View
Chenopodium quinoaAUR62009424AGL15: Agamous-like MADS-box protein AGL15C_Quinoa_Scaffold_3674-View
Capsella rubellaCarub.0006s1395PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDscaffold_6-View
Capsella rubellaCarub.0005s0848PTHR11945//PTHR11945:SF218 - MADS BOX PROTEIN // MADS-BOX PROTEIN AGL79scaffold_5+View
Cucumis sativus L.CsaV3_4G010090MADS-box transcription factorchr4-View
Daucus carotaDCAR_010174hypothetical proteinDCARv2_Chr3+View
Daucus carotaDCAR_025453hypothetical proteinDCARv2_Chr7+View
Daucus carotaDCAR_011022hypothetical proteinDCARv2_Chr3-View
Daucus carotaDCAR_010757hypothetical proteinDCARv2_Chr3+View
Davidia involucrataDinv34039GWHABJS00000008-View
Davidia involucrataDinv33860GWHABJS00000014+View
Davidia involucrataDinv34910GWHABJS00000012-View
Durio zibethinusDuzib205G0468NW_019168381.1+View
Durio zibethinusDuzib133G0093NW_019167938.1+View
Durio zibethinusDuzib251G0177NW_019167971.1-View
Durio zibethinusDuzib068G0816NW_019167838.1+View
Durio zibethinusDuzib211G0564NW_019168049.1+View
Erigeron canadensisECA238G2641Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA246G4787Conyza_canadensis_scaffold:8+View
Erigeron canadensisECA246G4338Conyza_canadensis_scaffold:8-View
Eucalyptus grandisEucgr.B00633Chr02+View
Eucalyptus grandisEucgr.K02546Chr11+View
Erythranthe guttataMigut.H00589scaffold_8-View
Eutrema salsugineumThhalv10004826m.gscaffold_6-View
Eutrema salsugineumThhalv10014493m.gPTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDscaffold_2-View
Fragaria x ananassaFAN05G4366PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDFvb6-3+View
Fragaria x ananassaFAN18G2153PTHR11945//PTHR11945:SF166 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDFvb5-1-View
Fragaria x ananassaFAN14G4594PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDFvb6-1+View
Fragaria x ananassaFAN02G2418PTHR11945//PTHR11945:SF218 - MADS BOX PROTEIN // MADS-BOX PROTEIN AGL79Fvb6-4-View
Fragaria vescaFvH4_6g46410PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDFvb6-View
Gossypium hirsutumGohir.D07G186700PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDD07-View
Gossypium hirsutumGohir.D13G084300PTHR11945//PTHR11945:SF194 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATEDD13+View
Gossypium hirsutumGohir.D07G084400PTHR11945//PTHR11945:SF155//PTHR11945:SF218 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED // MADS-BOX PROTEIN AGL79D07-View
Gossypium hirsutumGohir.D03G097900PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDD03+View
Gossypium hirsutumGohir.A07G179801PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDA07-View
Gossypium hirsutumGohir.A07G079100PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDA07-View
Gossypium hirsutumGohir.A03G071300PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDA03+View
Glycine maxGlyma.18G273500PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm18+View
Glycine maxGlyma.08G250700PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm08+View
Glycine maxGlyma.19G034500PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm19+View
Glycine maxGlyma.13G052100PTHR11945//PTHR11945:SF180 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm13-View
Gossypium raimondiiGorai.013G096000Chr13+View
Gossypium raimondiiGorai.001G090000Chr01-View
Gossypium raimondiiGorai.001G207300Chr01-View
Gossypium raimondiiGorai.003G103000Chr03+View
Helianthus annuusHanXRQChr12g0375471Probable K-box region and MADS-box transcription factor family proteinHanXRQChr12-View
Helianthus annuusHanXRQChr09g0262151Putative transcription factor, MADS-box; Transcription factor, K-boxHanXRQChr09-View
Helianthus annuusHanXRQChr15g0472781Putative transcription factor, K-boxHanXRQChr15+View
Lupinus albusLalb_Chr10g0092761PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDLalb_Chr10-View
Lupinus albusLalb_Chr02g0158761PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDLalb_Chr02+View
Lupinus albusLalb_Chr17g0341381PTHR11945:SF194 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATEDLalb_Chr17+View
Lotus japonicusLj3g0025851PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDchr3-View
Lotus japonicusLj1g0005828PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDchr1-View
Lotus japonicusLj2g0014435PTHR11945//PTHR11945:SF180 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDchr2-View
Lonicera japonicaLj2C430G5GWHAAZE00000002-View
Lactuca sativaLsat_1_v5_gn_3_81820Lsat_1_v8_lg_3-View
Lactuca sativaLsat_1_v5_gn_4_173641Lsat_1_v8_lg_4+View
Lactuca sativaLsat_1_v5_gn_3_97021Lsat_1_v8_lg_3-View
Magnolia biondiiMBI16_g05382_MAGBIOAED:0.36Chr16-View
Magnolia biondiiMBI19_g04940_MAGBIOAED:0.44Chr19-View
Malus domesticaMD09G1073900K-box region and MADS-box transcription factor family proteinChr09+View
Malus domesticaMD17G1065400K-box region and MADS-box transcription factor family proteinChr17+View
Malus domesticaMD06G1204100K-box region and MADS-box transcription factor family proteinChr06+View
Manihot esculentaManes.02G059200Chromosome02+View
Manihot esculentaManes.07G011600Chromosome07-View
Manihot esculentaManes.01G103100Chromosome01+View
Medicago truncatulaMedtr7g016600MADS-box transcription factorchr7+View
Nelumbo nuciferaNn3g17516chr3+View
Nelumbo nuciferaNn4g23508chr4+View
Nicotiana tabacumNitab4.5_0000036g0460Transcription factor, MADS-box, Transcription factor, K-boxNitab4.5_0000036-View
Petunia axillarisPeaxi162Scf00020g02337K-box region and MADS-box transcription factor family proteinPeaxi162Scf00020-View
Punica granatumPGR004G1332NC_045131.1-View
Prunus persicaPrupe.5G208400PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDPp05+View
Prunus persicaPrupe.3G249300Pp03-View
Papaver somniferumPSO478G0998NC_039361.1-View
Papaver somniferumPSO017G4281NC_039362.1+View
Papaver somniferumPSO782G3238NC_039365.1+View
Populus trichocarpaPotri.004G115400PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDChr04-View
Populus trichocarpaPotri.017G099700PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDChr17+View
Phaseolus vulgarisPhvul.008G027800Chr08-View
Phaseolus vulgarisPhvul.003G039200PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATEDChr03-View
Quercus lobataQL02p065897CM012294-View
Rosa chinensisRcHm_v2.0_Chr2g0164941RcHm_v2.0_Chr2-View
Rhododendron simsiiRhsim08G0076700chr08+View
Striga asiaticaSGA_v2.0_scaffold52G19102scaffold52-View
Striga asiaticaSGA_v2.0_scaffold148G36443scaffold148+View
Striga asiaticaSGA_v2.0_scaffold149G36511scaffold149+View
Salvia bowleyanaSalBow3G4458GWHASIU00000006-View
Salix brachistaSabra04G0071100GWHAAZH00000004+View
Salix brachistaSabra17G0086000GWHAAZH00000017+View
Sechium eduleSed0026823LG06+View
Solanum lycopersicumSolyc02g089200.4TM29SL4.0ch02+View
Solanum lycopersicumSolyc02g065730.2MADS box transcription factor (AHRD V3.3 *** Q689E7_GENTR)SL4.0ch02-View
Solanum lycopersicumSolyc03g114830.3FRUITFULL-like MADS-box 2SL4.0ch03-View
Schrenkiella parvulaSp2g18120PTHR11945:SF218 - MADS-BOX PROTEIN AGL79ch2-4+View
Schrenkiella parvulaSp6g28320PTHR11945//PTHR11945:SF196 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDch6-6+View
Solanum pennelliiSopen03g033910Agamous-like MADS-box protein AGL8 homolog (POTM1-1) - Solanum tuberosum (Potato), MADS box gene negatively regulated by APETALA1 | AGAMOUS-like 8 (AGL8) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development | LOCATED IN: nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family proteinSpenn-ch03-View
Solanum pennelliiSopen02g015950MADS box gene negatively regulated by APETALA1 | AGAMOUS-like 8 (AGL8) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development | LOCATED IN: nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family proteinSpenn-ch02-View
Solanum pennelliiSopen02g033990MADS-box protein, binds K domain of AG in vivo | SEPALLATA 2 (SEP2) | FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: flower development, ovule development | LOCATED IN: nucleus | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family proteinSpenn-ch02+View
Solanum tuberosumPGSC0003DMG400001378MADS-box transcription factor FBP29ST4.03ch02-View
Solanum tuberosumPGSC0003DMG400024625MADS box proteinST4.03ch03-View
Solanum tuberosumPGSC0003DMG400026563MADS-box transcription factor FBP29ST4.03ch02-View
Selenicereus undatusHund13677Scaffold_33679-View
Trochodendron aralioidesTAR374G1389group12+View
Theobroma cacaoThecc.02G325800K-box region and MADS-box transcription factor family proteinChromosome_2-View
Theobroma cacaoThecc.04G105700K-box region and MADS-box transcription factor family proteinChromosome_4+View
Tarenaya hasslerianaTHA.LOC104819107agamous-like MADS-box protein AGL15 isoform X1NW_010966177.1-View
Trifolium pratenseTPR.G15953Tp57577_TGAC_v2_LG3+View
Tripterygium wilfordiiTWI34G0788NC_052235.1-View
Tripterygium wilfordiiTWI32G0107NC_052254.1+View
Tripterygium wilfordiiTWI77G0779NC_052236.1+View
Tripterygium wilfordiiTWI60G0210NC_052246.1+View
Vaccinium macrocarponvmacro18130Similar to MADS2: Agamous-like MADS-box protein MADS2 (Vitis vinifera OX%3D29760)chr3_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1383G0579CM024070.1-View
Vigna mungoVMungo0464G0956CM024077.1+View
Vitis viniferaGSVIVG01036549001chr14-View