Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc10g0001200GWHAASQ00000010-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG2G3490LG-2-View
Aethionema arabicumAa31LG9G17090LG-9+View
Acer truncatumAtru.chr1.1703chr1+View
Arabidopsis lyrataAL7G52150scaffold_7+View
Arabidopsis lyrataAL2G25460scaffold_2-View
Amaranthus hybridusAh.16g101810AmaHy_arrow1_Scaffold_16-View
Amaranthus hybridusAh.10g037800Ribulose bisphosphate carboxylase small chain 2, chloroplastic (RuBisCO small subunit 2) (EC 4.1.1.39)AmaHy_arrow1_Scaffold_10-View
Aquilegia oxysepalaAqoxy3G00296CHR03+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.K6N5RUK01602 - ribulose-bisphosphate carboxylase small chain (rbcS)arahy.Tifrunner.gnm1.Arahy.04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.97RMNSPTHR31262//PTHR31262:SF4 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDarahy.Tifrunner.gnm1.Arahy.10+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.XT6T0BPTHR31262//PTHR31262:SF4 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDarahy.Tifrunner.gnm1.Arahy.20+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.HCT4KEK01602 - ribulose-bisphosphate carboxylase small chain (rbcS)arahy.Tifrunner.gnm1.Arahy.14-View
Arabidopsis thalianaAT5G38410Ribulose bisphosphate carboxylase (small chain) family protein Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090)%2C RBCS1B (At5g38430)%2C RBCS2B (At5g38420)%2C and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity. Ribulose bisphosphate carboxylase (small chain) family protein%3B FUNCTIONS IN: ribulose-bisphosphate carboxylase activity%3B INVOLVED IN: carbon fixation%2C response to blue light%2C response to red light%2C response to far red light%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: seedling growth%3B CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase%2C small chain (InterPro:IPR000894)%3B BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5-View
Arabidopsis thalianaAT1G67090ribulose bisphosphate carboxylase small chain 1A Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090)%2C RBCS1B (At5g38430)%2C RBCS2B (At5g38420)%2C and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity. ribulose bisphosphate carboxylase small chain 1A (RBCS1A)%3B FUNCTIONS IN: ribulose-bisphosphate carboxylase activity%2C copper ion binding%3B INVOLVED IN: carbon fixation%2C response to cold%2C response to blue light%2C response to red light%2C response to far red light%3B LOCATED IN: in 10 components%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C seedling growth%3B CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase%2C small chain (InterPro:IPR000894)%3B BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1)%3B Has 1998 Blast hits to 1975 proteins in 459 species: Archae - 0%3B Bacteria - 424%3B Metazoa - 0%3B Fungi - 0%3B Plants - 969%3B Viruses - 0%3B Other Eukaryotes - 605 (source: NCBI BLink).Chr1-View
Brassica carinataBcaC02g09646ChrC02-View
Brassica carinataBcaB06g27199ChrB06-View
Brassica carinataBcaB05g24235ChrB05-View
Brassica carinataBcaC03g14794ChrC03-View
Brassica carinataBcaB02g08009ChrB02+View
Brassica carinataBcaB06g27713ChrB06-View
Brassica carinataBcaC08g44378ChrC08-View
Brassica napusC04p45030C04-View
Brassica napusC06p18120C06-View
Brassica napusA07p19690A07-View
Brassica napusC02p22410C02-View
Brassica napusA04p11330A04+View
Brassica napusA02p13910A02-View
Brassica oleraceaBolC2t08396HC2-View
Brassica oleraceaBolC4t26081HC4-View
Brassica oleraceaBolC6t37020HC6-View
Brassica rapaBraA02t06452ZA02-View
Beta vulgarisEL10Ac2g04573K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Chr2_EL10_PGA_scaffold6+View
Camellia sinensis var. sinensisCSS0024931ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Eucalyptus globulus]Chr1-View
Capsicum annuumCAN.G625.14PGAv.1.6.scaffold625+View
Cicer arietinum L.Ca_04054_v3Ca_LG2_v3-View
Corylus avellanaHaze_14148Similar to RBCS1: Ribulose bisphosphate carboxylase small chain, chloroplastic (Betula pendula OX%3D3505)5+View
Citrus clementinaCiclev10012893m.gscaffold_6-View
Carpinus fangianaCfa007927Cfa03-View
Cardamine hirsutaCARHR214170Ribulose bisphosphate carboxylase small chainChr7+View
Cardamine hirsutaCARHR059540Ribulose bisphosphate carboxylase small chainChr2-View
Carya illinoinensisCiPaw.03G061200PTHR31262:SF4 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDChr03+View
Chenopodium quinoaAUR62008991RBCS-1: Ribulose bisphosphate carboxylase small chain 1, chloroplasticC_Quinoa_Scaffold_1710+View
Chenopodium quinoaAUR62023307RBCS3: Ribulose bisphosphate carboxylase small chain 3, chloroplasticC_Quinoa_Scaffold_1352-View
Capsella rubellaCarub.0002s13384.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylasescaffold_2-View
Capsella rubellaCarub.0007s37584.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylasescaffold_7+View
Davidia involucrataDinv34825GWHABJS00000012-View
Durio zibethinusDuzib133G0331NW_019167938.1-View
Erigeron canadensisECA232G3191Conyza_canadensis_scaffold:2-View
Eucalyptus grandisEucgr.J01502Chr10+View
Eucalyptus grandisEucgr.B03013Chr02-View
Erythranthe guttataMigut.H00214scaffold_8+View
Eutrema salsugineumThhalv10019202m.gK01602 - ribulose-bisphosphate carboxylase small chain (rbcS)scaffold_9-View
Eutrema salsugineumThhalv10027955m.gK01602 - ribulose-bisphosphate carboxylase small chain (rbcS)scaffold_14+View
Gossypium hirsutumGohir.D11G169600K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)D11-View
Glycine maxGlyma.13G046200K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Gm13-View
Glycine maxGlyma.18G2969004.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylaseGm18-View
Glycine maxGlyma.19G046600K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Gm19+View
Gossypium raimondiiGorai.007G181300Chr07-View
Lupinus albusLalb_Chr10g0091251K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Lalb_Chr10+View
Lupinus albusLalb_Chr06g0174591K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Lalb_Chr06-View
Lupinus albusLalb_Chr04g0257441PTHR31262//PTHR31262:SF4 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDLalb_Chr04+View
Lotus japonicusLj2g0016211K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)chr2-View
Lotus japonicusLj1g0001864K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)chr1+View
Lonicera japonicaLj4A191T52GWHAAZE00000004-View
Lonicera japonicaLj6A758T18GWHAAZE00000006-View
Lactuca sativaLsat_1_v5_gn_4_153980K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Lsat_1_v8_lg_4+View
Lactuca sativaLsat_1_v5_gn_2_79600K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Lsat_1_v8_lg_2-View
Malus domesticaMD17G1244400ribulose bisphosphate carboxylase small chain 1AChr17+View
Medicago truncatulaMedtr6g018300ribulose bisphosphate carboxylase small chainchr6+View
Medicago truncatulaMedtr7g007120ribulose bisphosphate carboxylase small chainchr7+View
Nicotiana tabacumNitab4.5_0000912g0280Ribulose bisphosphate carboxylase small chain, domain, Ribulose bisphosphate carboxylase, small chainNitab4.5_0000912-View
Petunia axillarisPeaxi162Scf00394g00425Ribulose bisphosphate carboxylase small chain, chloroplasticPeaxi162Scf00394+View
Punica granatumPGR042G0189NC_045130.1-View
Populus trichocarpaPotri.004G100000PTHR31262//PTHR31262:SF4 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDChr04-View
Populus trichocarpaPotri.017G114600PTHR31262//PTHR31262:SF4 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATEDChr17+View
Phaseolus vulgarisPhvul.004G064800K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)Chr04+View
Quercus lobataQL02p052407CM012294+View
Rhododendron simsiiRhsim10G0066900chr10+View
Salix brachistaSabra17G0094900GWHAAZH00000017+View
Salix brachistaSabra04G0079900GWHAAZH00000004+View
Solanum lycopersicumSolyc02g085950.4cell wall protein X77373SL4.0ch02+View
Solanum lycopersicumSolyc02g063150.3RuBP carboxylase small subunitSL4.0ch02+View
Schrenkiella parvulaSp5g22020K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)ch5-6-View
Solanum pennelliiSopen02g030610Ribulose bisphosphate carboxylase small chain 2C, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) - Solanum tuberosum (Potato), Ribulose bisphosphate carboxylase (small chain) family protein | FUNCTIONS IN: ribulose-bisphosphate carboxylase activity | INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light | LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane | EXPRESSED IN: 12 plant structures | CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain | BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family proteinSpenn-ch02+View
Solanum pennelliiSopen02g014220Ribulose bisphosphate carboxylase small chain 3, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) - Solanum tuberosum (Potato), Ribulose bisphosphate carboxylase (small chain) family protein | FUNCTIONS IN: ribulose-bisphosphate carboxylase activity | INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light | LOCATED IN: in 7 components | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain | BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family proteinSpenn-ch02+View
Solanum tuberosumPGSC0003DMG400012666Ribulose bisphosphate carboxylase small chain 2C, chloroplasticST4.03ch02+View
Solanum tuberosumPGSC0003DMG400024182Ribulose bisphosphate carboxylase small chain C, chloroplasticST4.03ch02+View
Selenicereus undatusHund16152Scaffold_33677+View
Selenicereus undatusHund13721Scaffold_33679-View
Trochodendron aralioidesTAR622G0312group8-View
Trochodendron aralioidesTAR371G0931group13-View
Trochodendron aralioidesTAR374G0087group12-View
Theobroma cacaoThecc.04G134500Ribulose bisphosphate carboxylase (small chain) family proteinChromosome_4-View
Trifolium pratenseTPR.G32462Tp57577_TGAC_v2_scaf_193-View
Tripterygium wilfordiiTWI77G0921NC_052236.1-View
Tripterygium wilfordiiTWI53G1994NC_052244.1-View
Vaccinium macrocarponvmacro05559Similar to RBCS-1A: Ribulose bisphosphate carboxylase small chain 1A, chloroplastic (Arabidopsis thaliana OX%3D3702)chr12_Vaccinium_macrocarpon_Stevens_v1-View