Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG2G3630LG-2-View
Acer truncatumAtru.chr8.809chr8-View
Actinidia chinensisActinidia18122Lachesis_group11-View
Actinidia chinensisActinidia36307Lachesis_group4-View
Avicennia marinaMSTRG.13501ScioBoG_18778_HRSCAF_18863-View
Avicennia marinaMSTRG.23822ScioBoG_3895_HRSCAF_3912+View
Avicennia marinaMSTRG.2265ScioBoG_102834_HRSCAF_103055+View
Amaranthus hybridusAh.10g037510Transcription factor TCP12 (Protein BRANCHED 2)AmaHy_arrow1_Scaffold_10-View
Aquilegia oxysepalaAqoxy3G03902CHR03-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.46V6T7PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1arahy.Tifrunner.gnm1.Arahy.20+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.Q1RL33PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1arahy.Tifrunner.gnm1.Arahy.14-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.47Q1NWPTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1arahy.Tifrunner.gnm1.Arahy.04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.18WYEQPTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1arahy.Tifrunner.gnm1.Arahy.10+View
Arabidopsis thalianaAT1G67260TCP family transcription factor Encodes protein with TCP (TB1%2CCYC%2CPCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis%2C there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP1%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C CYC/TB1%2C R domain (InterPro:IPR017888)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1)%3B Has 1624 Blast hits to 1624 proteins in 376 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1618%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). TCP1%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: flower development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: floral meristem%3B EXPRESSED DURING: 1 floral meristem visible%2C 2 floral meristem notched%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C CYC/TB1%2C R domain (InterPro:IPR017888)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1)%3B Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1623%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink).Chr1-View
Brassica carinataBcaB05g24253ChrB05-View
Brassica carinataBcaC03g14821ChrC03-View
Brassica napusA02p14110A02-View
Brassica napusC02p22720C02-View
Brassica oleraceaBolC2t08425HC2-View
Brassica rapaBraA02t06474ZA02-View
Beta vulgarisEL10Ac2g04612PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12Chr2_EL10_PGA_scaffold6+View
Camellia sinensis var. sinensisCSS0012543PREDICTED: transcription factor CYCLOIDEA [Vitis vinifera]Chr1+View
Cannabis sativaCANSAT64G1749NC_044379.1+View
Corylus avellanaHaze_14118Similar to TCP1: Transcription factor TCP1 (Arabidopsis thaliana OX%3D3702)5-View
Coffea canephoraCc07_g05080Putative Transcription factor CYCLOIDEA (Fragment)chr7-View
Carpinus fangianaCfa007952Cfa03+View
Cardamine hirsutaCARHR059730Cycloidea-like protein group 1AChr2-View
Carya illinoinensisCiPaw.03G059100PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1Chr03-View
Citrullus lanatusClCG05G012030CYCLOIDEA-like group 1B proteinCG_Chr05-View
Cucumis meloMELO3C023772.2Cycloidea-like protein group 1Achr06+View
Carica papayaCpa.g.sc179.29supercontig_179+View
Capsella rubellaCarub.0002s1353PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1scaffold_2-View
Cucumis sativus L.CsaV3_3G020440Cycloidea-like protein group 1Achr3+View
Cucumis sativus L.CsaV3_5G039160Cycloidea-like protein group 1Achr5+View
Daucus carotaDCAR_026713hypothetical proteinDCARv2_Chr8+View
Davidia involucrataDinv34853GWHABJS00000012+View
Davidia involucrataDinv33927GWHABJS00000014-View
Durio zibethinusDuzib138G1843NW_019167893.1-View
Eucalyptus grandisEucgr.J01466Chr10-View
Erythranthe guttataMigut.H00528scaffold_8+View
Fragaria x ananassaFAN14G0133PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1Fvb6-1-View
Fragaria x ananassaFAN09G2730PTHR31072//PTHR31072:SF6 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP18Fvb6-2-View
Fragaria vescaFvH4_6g45410PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1Fvb6+View
Glycine maxGlyma.13G047400PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1Gm13+View
Glycine maxGlyma.19G044400PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1Gm19-View
Hydrangea macrophyllaHma1.2p1_0550F.1_g177210Hma1.2p1_0550F.1-View
Lupinus albusLalb_Chr02g0158341PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1Lalb_Chr02+View
Lotus japonicusLj2g0018524PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1chr2+View
Lonicera japonicaLj6P767T18GWHAAZE00000006+View
Lonicera japonicaLj7C10T1GWHAAZE00000007-View
Lonicera japonicaLj4C131T10GWHAAZE00000004-View
Malus domesticaMD09G1083300Chr09-View
Malus domesticaMD13G1047200TCP domain protein 12Chr13+View
Malus domesticaMD17G1073600TCP family transcription factorChr17-View
Manihot esculentaManes.02G066400Chromosome02-View
Punica granatumPGR083G2180NC_045133.1-View
Punica granatumPGR042G2734NC_045130.1+View
Punica granatumPGR004G1057NC_045131.1+View
Prunus persicaPrupe.3G240200PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1Pp03+View
Prunus persicaPrupe.1G304700PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12Pp01-View
Pisum sativumPsat3g190960TCP family transcription factorchr3LG5+View
Papaver somniferumPSO478G2908NC_039361.1+View
Populus trichocarpaPotri.017G112000PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1Chr17-View
Quercus lobataQL02p052869CM012294+View
Rosa chinensisRcHm_v2.0_Chr2g0163221RcHm_v2.0_Chr2+View
Rhododendron simsiiRhsim10G0063600chr10+View
Rhododendron simsiiRhsim12G0144800chr12-View
Salix brachistaSabra17G0092900GWHAAZH00000017-View
Sechium eduleSed0006307LG08+View
Sechium eduleSed0017507LG05+View
Solanum pennelliiSopen06g026500Transcription factor, TCPSpenn-ch06+View
Selenicereus undatusHund13736Scaffold_33679+View
Trochodendron aralioidesTAR374G1647group12-View
Trochodendron aralioidesTAR629G0148group0-View
Trochodendron aralioidesTAR622G0099group8+View
Theobroma cacaoThecc.04G138700LST1Chromosome_4+View
Theobroma cacaoThecc.02G361900Chromosome_2+View
Tarenaya hasslerianaTHA.LOC104805551transcription factor TCP1 isoform X1NW_010961290.1+View
Tarenaya hasslerianaTHA.LOC104823871transcription factor TCP1-like isoform X1NW_010966881.1-View
Vigna mungoVMungo0464G1944CM024077.1-View
Vigna mungoVMungo1383G2603CM024070.1+View
Vitis viniferaGSVIVG01036449001chr14+View