Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc04g0001960GWHAASQ00000004-View
Sc12g0005450GWHAASQ00000012-View
Sc04g0009000GWHAASQ00000004+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG7G7780LG-7-View
Aethionema arabicumAa31LG4G10660LG-4-View
Acer truncatumAtru.chr11.1994chr11+View
Actinidia chinensisActinidia15028Lachesis_group12+View
Arabidopsis lyrataAL1G37740scaffold_1-View
Avicennia marinaMSTRG.13379ScioBoG_18778_HRSCAF_18863-View
Avicennia marinaMSTRG.23998ScioBoG_3895_HRSCAF_3912+View
Amaranthus hybridusAh.02g129780RING-H2 finger protein ATL46 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL46)AmaHy_arrow1_Scaffold_2+View
Amaranthus hybridusAh.03g132520AmaHy_arrow1_Scaffold_3+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.466F5FPTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47arahy.Tifrunner.gnm1.Arahy.15+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.GI7IK7PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46arahy.Tifrunner.gnm1.Arahy.11-View
Arabidopsis thalianaAT1G23980RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G40250.1)%3B Has 9283 Blast hits to 9263 proteins in 297 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2141%3B Fungi - 689%3B Plants - 5036%3B Viruses - 72%3B Other Eukaryotes - 1339 (source: NCBI BLink).Chr1-View
Brassica carinataBcaB07g32367ChrB07-View
Brassica carinataBcaC05g26294ChrC05-View
Brassica carinataBcaC07g39221ChrC07-View
Brassica carinataBcaB03g11959ChrB03-View
Brassica napusC05p23100C05-View
Brassica napusA08p27970A08+View
Brassica napusA09p40920A09+View
Brassica napusC08p22160C08-View
Brassica oleraceaBolC5t31009HC5-View
Brassica oleraceaBolC8t49862HC8-View
Brassica rapaBraA09t39582ZA09+View
Brassica rapaBraA08t34728ZA08+View
Beta vulgarisEL10Ac6g13641PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Chr6_EL10_PGA_scaffold0+View
Camellia sinensis var. sinensisCSS0038504PREDICTED: RING-H2 finger protein ATL46 [Nelumbo nucifera]Chr6-View
Cannabis sativaCANSAT01G2440NC_044373.1+View
Cicer arietinum L.Ca_04211_v3Ca_LG2_v3-View
Cicer arietinum L.Ca_04611_v3Ca_LG2_v3-View
Cicer arietinum L.Ca_22751_v3Ca_LG7_v3-View
Corylus avellanaHaze_07485Similar to ATL46: RING-H2 finger protein ATL46 (Arabidopsis thaliana OX%3D3702)4+View
Coffea canephoraCc11_g14440Putative RING-H2 finger protein ATL46chr11+View
Citrus clementinaCiclev10031917m.gscaffold_4-View
Carpinus fangianaCfa009114Cfa03-View
Cardamine hirsutaCARHR024310Ring finger protein, putativeChr1-View
Carya illinoinensisCiPaw.04G023700PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Chr04+View
Citrullus lanatusClCG01G014020Ring finger protein, putativeCG_Chr01-View
Citrullus lanatusClCG05G025170Ring finger protein, putativeCG_Chr05+View
Cucumis meloMELO3C012012.2RING-H2 finger protein ATL46chr10+View
Carica papayaCpa.g.sc69.2supercontig_69+View
Chenopodium quinoaAUR62013991ATL46: RING-H2 finger protein ATL46C_Quinoa_Scaffold_3035+View
Capsella rubellaCarub.0001s2340scaffold_1-View
Cucumis sativus L.CsaV3_5G031720RING-H2 finger protein ATL46chr5-View
Cucumis sativus L.CsaV3_1G008330RING-H2 finger protein ATL46-likechr1+View
Cucumis sativus L.CsaV3_5G037320RING-H2 finger protein ATL46chr5-View
Daucus carotaDCAR_007097hypothetical proteinDCARv2_Chr2-View
Daucus carotaDCAR_031088hypothetical proteinDCARv2_Chr9+View
Daucus carotaDCAR_021566hypothetical proteinDCARv2_Chr6+View
Davidia involucrataDinv33509GWHABJS00000014-View
Davidia involucrataDinv24885GWHABJS00000018-View
Durio zibethinusDuzib147G0051NW_019168470.1+View
Durio zibethinusDuzib248G0170NW_019168048.1-View
Durio zibethinusDuzib187G0392NW_019167860.1+View
Durio zibethinusDuzib251G0313NW_019167971.1+View
Durio zibethinusDuzib268G1014NW_019168270.1+View
Erigeron canadensisECA246G5269Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA233G1814Conyza_canadensis_scaffold:1-View
Erigeron canadensisECA246G1421Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA238G2326Conyza_canadensis_scaffold:6-View
Erigeron canadensisECA232G1710Conyza_canadensis_scaffold:2-View
Eucalyptus grandisEucgr.B00353Chr02+View
Erythranthe guttataMigut.E00151scaffold_5+View
Eutrema salsugineumThhalv10007961m.gPTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47scaffold_5+View
Fragaria x ananassaFAN07G0298PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46Fvb4-4+View
Fragaria x ananassaFAN22G2060PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46Fvb4-1-View
Fragaria x ananassaFAN12G3803PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Fvb4-3+View
Fragaria x ananassaFAN17G1601PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46Fvb4-2+View
Fragaria x ananassaFAN05G0519PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46Fvb6-3-View
Fragaria vescaFvH4_4g34840PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Fvb4-View
Gossypium hirsutumGohir.D02G164000PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47D02-View
Gossypium hirsutumGohir.A03G141100PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47A03-View
Glycine maxGlyma.02G033200PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47Gm02+View
Glycine maxGlyma.01G032200PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47Gm01-View
Glycine maxGlyma.17G091600PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Gm17-View
Glycine maxGlyma.18G135300PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47Gm18+View
Glycine maxGlyma.05G035800PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Gm05+View
Glycine maxGlyma.08G289200PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47Gm08-View
Gossypium raimondiiGorai.005G184000Chr05-View
Helianthus annuusHanXRQChr12g0383291Putative zinc finger, RING/FYVE/PHD-typeHanXRQChr12-View
Helianthus annuusHanXRQChr17g0570231Putative zinc finger, RING/FYVE/PHD-typeHanXRQChr17-View
Lupinus albusLalb_Chr10g0097521PTHR14155//PTHR14155:SF160 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDLalb_Chr10+View
Lupinus albusLalb_Chr21g0319351PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Lalb_Chr21+View
Lupinus albusLalb_Chr05g0217031PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47Lalb_Chr05-View
Lotus japonicusLj2g0007273PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46chr2+View
Lotus japonicusLj2g0013030PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47chr2-View
Lotus japonicusLj4g0018950PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47chr4-View
Lonicera japonicaLj5P122T38GWHAAZE00000005+View
Lonicera japonicaLj6P802T25GWHAAZE00000006+View
Lonicera japonicaLju41C33T5GWHAAZE00000094+View
Lactuca sativaLsat_1_v5_gn_3_48000PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47Lsat_1_v8_lg_3+View
Lactuca sativaLsat_1_v5_gn_2_92520PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Lsat_1_v8_lg_2-View
Lactuca sativaLsat_1_v5_gn_4_7081PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Lsat_1_v8_lg_4+View
Malus domesticaMD13G1089200RING/U-box superfamily proteinChr13+View
Malus domesticaMD09G1036200RING/U-box superfamily proteinChr09-View
Malus domesticaMD16G1089400RING/U-box superfamily proteinChr16+View
Manihot esculentaManes.12G031500Chromosome12-View
Manihot esculentaManes.01G198400Chromosome01+View
Manihot esculentaManes.06G102400Chromosome06+View
Manihot esculentaManes.14G067200Chromosome14+View
Manihot esculentaManes.05G088400Chromosome05-View
Medicago truncatulaMedtr5g034790RING-H2 finger protein ATL47chr5-View
Medicago truncatulaMedtr8g063660RING-H2 finger protein ATL47chr8+View
Nelumbo nuciferaNn4g22848chr4-View
Olea europaeaOeu001751.1chr1-View
Olea europaeaOeu039477.1chr12-View
Petunia axillarisPeaxi162Scf00129g00092RING/U-box superfamily proteinPeaxi162Scf00129+View
Petunia axillarisPeaxi162Scf00421g00124Unknown proteinPeaxi162Scf00421-View
Punica granatumPGR119G1787NC_045132.1+View
Punica granatumPGR142G2471NC_045128.1+View
Prunus persicaPrupe.1G256600PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Pp01-View
Papaver somniferumPSO478G3165NC_039361.1+View
Papaver somniferumPSO832G0618NC_039367.1-View
Papaver somniferumPSO063G2934NC_039364.1-View
Phaseolus vulgarisPhvul.002G072700PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47Chr02-View
Phaseolus vulgarisPhvul.003G053400PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47Chr03-View
Phaseolus vulgarisPhvul.003G198400PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46Chr03+View
Quercus lobataQL03p0619133-View
Rosa chinensisRcHm_v2.0_Chr4g0444181RcHm_v2.0_Chr4-View
Rhododendron simsiiRhsim12G0122200chr12-View
Rhododendron simsiiRhsim08G0055800chr08+View
Striga asiaticaSGA_v2.0_scaffold87G27013scaffold87+View
Salix brachistaSabra15G0097700GWHAAZH00000015+View
Sechium eduleSed0001756LG11-View
Sechium eduleSed0020353LG04-View
Sechium eduleSed0021295LG06+View
Solanum lycopersicumSolyc03g114090.1RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN)SL4.0ch03+View
Solanum lycopersicumSolyc05g005790.4RING-H2 finger protein ATL47-like (AHRD V3.3 *** A0A2I4FLG8_9ROSI)SL4.0ch05-View
Schrenkiella parvulaSp1g21260PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47ch1-1-View
Solanum pennelliiSopen05g001800RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch05-View
Solanum pennelliiSopen03g033150RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch03+View
Solanum pennelliiSopen02g016790RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch02+View
Solanum tuberosumPGSC0003DMG400040994Ring finger proteinST4.03ch03+View
Solanum tuberosumPGSC0003DMG400042968Ring finger proteinST4.03ch02+View
Solanum tuberosumPGSC0003DMG400004128Ring finger proteinST4.03ch05+View
Solanum tuberosumPGSC0003DMG400038862Ring finger proteinST4.03ch02+View
Trochodendron aralioidesTAR622G1145group8+View
Trochodendron aralioidesTAR629G0606group0+View
Trochodendron aralioidesTAR374G1247group12+View
Theobroma cacaoThecc.02G246300RING/U-box superfamily proteinChromosome_2-View
Theobroma cacaoThecc.03G008000RING/U-box superfamily proteinChromosome_3+View
Tarenaya hasslerianaTHA.LOC104822959RING-H2 finger protein ATL47-likeNW_010966822.1+View
Tarenaya hasslerianaTHA.LOC104808918RING-H2 finger protein ATL47-likeNW_010960187.1+View
Tripterygium wilfordiiTWI18G0797NC_052241.1+View
Tripterygium wilfordiiTWI60G0684NC_052246.1+View
Tripterygium wilfordiiTWI75G1834NC_052253.1-View
Tripterygium wilfordiiTWI12G1331NC_052243.1-View
Vigna mungoVMungo1215G3355CM024074.1-View
Vigna mungoVMungo1215G1744CM024074.1-View
Vitis viniferaGSVIVG01020210001chr1+View
Vitis viniferaGSVIVG01007793001chr17+View