Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr2.1632chr2-View
Actinidia chinensisActinidia31731Lachesis_group0+View
Avicennia marinaMSTRG.20627ScioBoG_26180_HRSCAF_26306-View
Avicennia marinaMSTRG.17080ScioBoG_19743_HRSCAF_19834-View
Camellia sinensis var. sinensisCSS0044214hypothetical protein CICLE_v10030998mg [Citrus clementina]Chr6+View
Capsicum annuumCAN.G992.26PGAv.1.6.scaffold992+View
Cannabis sativaCANSAT25G0177NC_044370.1-View
Corylus avellanaHaze_15785Similar to SIGB: RNA polymerase sigma factor sigB (Arabidopsis thaliana OX%3D3702)11-View
Coffea canephoraCc02_g26490Putative RNA polymerase sigma factor rpoDchr2+View
Citrus clementinaCiclev10030998m.gscaffold_4-View
Carpinus fangianaCfa003701Cfa01+View
Citrullus lanatusClCG06G000590RNA polymerase sigma factorCG_Chr06-View
Cucumis meloMELO3C022483.2RNA polymerase sigma factorchr11+View
Carica papayaCpa.g.sc73.29supercontig_73+View
Cucumis sativus L.CsaV3_6G006360RNA polymerase sigma factorchr6-View
Daucus carotaDCAR_029568hypothetical proteinDCARv2_Chr9+View
Davidia involucrataDinv43518GWHABJS00000016-View
Davidia involucrataDinv43959GWHABJS00000020-View
Durio zibethinusDuzib128G0739NW_019168481.1-View
Durio zibethinusDuzib177G0233NW_019168004.1+View
Erigeron canadensisECA236G3956Conyza_canadensis_scaffold:3-View
Erythranthe guttataMigut.B01418scaffold_2-View
Helianthus annuusHanXRQChr04g0117681Putative RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 like domainHanXRQChr04-View
Lonicera japonicaLj9A617T59GWHAAZE00000009+View
Lonicera japonicaLj7A560T38GWHAAZE00000007+View
Manihot esculentaManes.08G156300Chromosome08-View
Nicotiana tabacumNitab4.5_0000050g0200RNA polymerase sigma-70 region 1.2, Winged helix-turn-helix DNA-binding domain, RNA polymerase sigma-70 region 2, RNA polymerase sigma factor, region 3/4, RNA polymerase sigma factor, region 2, RNA polymerase sigma-70 region 3Nitab4.5_0000050-View
Nicotiana tabacumNitab4.5_0000792g0120Winged helix-turn-helix DNA-binding domain, RNA polymerase sigma factor, SigB/SigC/SigD, plastid, RNA polymerase sigma-70 region 3, RNA polymerase sigma factor, region 3/4, RNA polymerase sigma-70, RNA polymerase sigma factor, region 2, RNA polymerase sigma-70 region 4, RNA polymerase sigma-70 like domain, RNA polymerase sigma-70 region 2, RNA polymerase sigma-70 region 1.2Nitab4.5_0000792+View
Petunia axillarisPeaxi162Scf00907g00024RNA polymerase sigma factor SigAPeaxi162Scf00907-View
Populus trichocarpaPotri.013G070500PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMEDChr13-View
Salvia bowleyanaSalBow5G2044GWHASIU00000003-View
Salix brachistaSabra13G0061300GWHAAZH00000013-View
Sechium eduleSed0009327LG09-View
Sechium eduleSed0002912LG04+View
Solanum lycopersicumSolyc01g081490.3RNA polymerase sigma factor (AHRD V3.3 *** A0A1U8EM77_CAPAN)SL4.0ch01+View
Solanum pennelliiSopen01g033050Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light. | RNApolymerase sigma subunit 2 (SIG2) | CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 , Winged helix-turn-helix transcription repressor DNA-binding , RNA polymerase sigma-70 region 3 , RNA polymerase sigma-70 , RNA polymerase sigma factor, region 3/4 , RNA polymerase sigma-70 region 1.2 , RNA polymerase sigma-70 factor , RNA polymerase sigma factor, SigB/SigC/SigD, plastid , RNA polymerase sigma-70 region 2 , RNA polymerase sigma-70 region 4 | BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit FSpenn-ch01+View
Solanum tuberosumPGSC0003DMG400031111SIGB (SIGMA FACTOR B)ST4.03ch01-View
Theobroma cacaoThecc.05G235100RNApolymerase sigma subunit 2Chromosome_5+View
Vaccinium macrocarponvmacro13600Similar to SIGB: RNA polymerase sigma factor sigB (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1+View