Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold393G50698scaffold393-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG2G16460LG-2-View
Aethionema arabicumAa31LG8G13240LG-8+View
Acer truncatumAtru.chr5.2655chr5+View
Actinidia chinensisActinidia16475Lachesis_group25-View
Arabidopsis lyrataAL7G17340scaffold_7+View
Arabidopsis lyrataAL3G47260scaffold_3+View
Avicennia marinaMSTRG.20166ScioBoG_26180_HRSCAF_26306-View
Avicennia marinaMSTRG.27732ScioBoG_94932_HRSCAF_95134-View
Aquilegia oxysepalaAqoxy6G01277CHR06+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.JELE8TPTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.20-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.U8FDA3PF13639 - Ring finger domain (zf-RING_2)arahy.Tifrunner.gnm1.Arahy.05+View
Arabidopsis thalianaAT2G15530RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1)%3B Has 9020 Blast hits to 8257 proteins in 301 species: Archae - 0%3B Bacteria - 55%3B Metazoa - 2556%3B Fungi - 687%3B Plants - 3907%3B Viruses - 28%3B Other Eukaryotes - 1787 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1).Chr2+View
Arabidopsis thalianaAT4G34040RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15530.3)%3B Has 8873 Blast hits to 7809 proteins in 315 species: Archae - 0%3B Bacteria - 89%3B Metazoa - 2441%3B Fungi - 580%3B Plants - 3871%3B Viruses - 41%3B Other Eukaryotes - 1851 (source: NCBI BLink).Chr4-View
Brassica oleraceaBolC9t54163HC9+View
Brassica rapaBraA09t36721ZA09+View
Camellia sinensis var. sinensisCSS0024447conserved hypothetical protein [Ricinus communis]Chr2+View
Camellia sinensis var. sinensisCSS0009876hypothetical protein JCGZ_12413 [Jatropha curcas]Chr1+View
Camellia sinensis var. sinensisCSS0000462PREDICTED: E3 ubiquitin-protein ligase MBR2 isoform X1 [Vitis vinifera]Chr4-View
Cannabis sativaCANSAT25G2748NC_044370.1-View
Cicer arietinum L.Ca_18706_v3Ca_LG6_v3-View
Corylus avellanaHaze_10099Similar to MBR2: E3 ubiquitin-protein ligase MBR2 (Arabidopsis thaliana OX%3D3702)9-View
Coffea canephoraCc02_g18950Putative RING/U-box superfamily proteinchr2-View
Citrus clementinaCiclev10027894m.gscaffold_8+View
Cardamine hirsutaCARHR242180RING/U-box superfamily proteinChr7-View
Cardamine hirsutaCARHR105820RING/U-box superfamily proteinChr3+View
Carya illinoinensisCiPaw.05G008000PTHR14155//PTHR14155:SF72//PTHR22937//PTHR22937:SF55 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED // RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDChr05-View
Carya illinoinensisCiPaw.06G171600PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr06+View
Citrullus lanatusClCG08G016100RING/U-box superfamily protein LENGTH=691CG_Chr08-View
Cucumis meloMELO3C010842.2E3 ubiquitin-protein ligase MBR2chr03-View
Corchorus olitoriusCOL.COLO4_32635Zinc finger%2C RING-typeAWUE01021138.1+View
Chenopodium quinoaAUR62010243HIP1: Probable E3 ubiquitin-protein ligase HIP1C_Quinoa_Scaffold_1257-View
Chenopodium quinoaAUR62001912Protein of unknown functionC_Quinoa_Scaffold_4480+View
Capsella rubellaCarub.0007s0636PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_7+View
Cucumis sativus L.CsaV3_2G026530E3 ubiquitin-protein ligase MBR2chr2+View
Daucus carotaDCAR_022013hypothetical proteinDCARv2_Chr6-View
Daucus carotaDCAR_029072hypothetical proteinDCARv2_Chr9-View
Davidia involucrataDinv42168GWHABJS00000002+View
Davidia involucrataDinv15731GWHABJS00000005-View
Durio zibethinusDuzib132G0227The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codonsNW_019167915.1-View
Durio zibethinusDuzib187G1450NW_019167860.1+View
Durio zibethinusDuzib147G0229NW_019168470.1+View
Durio zibethinusDuzib116G0443NW_019167949.1-View
Erigeron canadensisECA234G0549Conyza_canadensis_scaffold:4+View
Erigeron canadensisECA236G2033Conyza_canadensis_scaffold:3+View
Eucalyptus grandisEucgr.I01135Chr09+View
Erythranthe guttataMigut.B00363scaffold_2-View
Erythranthe guttataMigut.C00560scaffold_3+View
Eutrema salsugineumThhalv10022580m.gPTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_11-View
Eutrema salsugineumThhalv10024583m.gPTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_1+View
Fragaria x ananassaFAN27G1863PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2-1+View
Fragaria x ananassaFAN15G3694PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2-4+View
Fragaria x ananassaFAN20G2802PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2-3-View
Fragaria x ananassaFAN24G2043PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2-2-View
Fragaria x ananassaFAN20G1867PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2-3-View
Fragaria vescaFvH4_2g05790PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDFvb2+View
Gossypium hirsutumGohir.A13G041600K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111)A13-View
Gossypium hirsutumGohir.A12G023000PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDA12+View
Gossypium hirsutumGohir.A11G193500PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDA11-View
Gossypium hirsutumGohir.D12G023700PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDD12+View
Gossypium hirsutumGohir.D13G040300K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111)D13-View
Gossypium hirsutumGohir.D11G200700PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDD11-View
Glycine maxGlyma.02G103300PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm02-View
Glycine maxGlyma.07G214600PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDGm07-View
Glycine maxGlyma.17G172100PTHR14155//PTHR14155:SF163 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm17+View
Gossypium raimondiiGorai.008G024100Chr08+View
Gossypium raimondiiGorai.007G214900Chr07-View
Gossypium raimondiiGorai.013G045200Chr13-View
Hydrangea macrophyllaHma1.2p1_0370F.1_g137640Hma1.2p1_0370F.1+View
Lupinus albusLalb_Chr09g0328401PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDLalb_Chr09-View
Lotus japonicusLj4g0022544K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44)chr4+View
Lonicera japonicaLj4C61T9GWHAAZE00000004-View
Lonicera japonicaLj9C355G13GWHAAZE00000009+View
Lactuca sativaLsat_1_v5_gn_0_4280PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDLsat_1_v8_lg_7+View
Lactuca sativaLsat_1_v5_gn_5_112240K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111)Lsat_1_v8_lg_5+View
Malus domesticaMD05G1083400RING/U-box superfamily proteinChr05-View
Manihot esculentaManes.18G039700Chromosome18-View
Manihot esculentaManes.13G122800Chromosome13+View
Medicago truncatulaMedtr4g085625hypothetical proteinchr4+View
Nelumbo nuciferaNn1g04799chr1+View
Olea europaeaOeu010594.1chr15-View
Petunia axillarisPeaxi162Scf00016g02027RING/U-box superfamily proteinPeaxi162Scf00016-View
Petunia axillarisPeaxi162Scf00450g00025PLC-like phosphodiesterases superfamily proteinPeaxi162Scf00450+View
Punica granatumPGR142G3349NC_045128.1+View
Punica granatumPGR102G0481NC_045129.1+View
Prunus persicaPrupe.8G127800Pp08-View
Pisum sativumPsat7g126120Ring finger domainchr7LG7-View
Papaver somniferumPSO675G7872NC_039358.1-View
Papaver somniferumPSO170G6274NC_039360.1-View
Papaver somniferumPSO210G7164NC_039359.1-View
Populus trichocarpaPotri.009G100100PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr09+View
Populus trichocarpaPotri.001G304900PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr01+View
Populus trichocarpaPotri.007G045500PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMEDChr07-View
Quercus lobataQL06p0408976+View
Quercus lobataQL11p03496811+View
Rosa chinensisRcHm_v2.0_Chr6g0257951RcHm_v2.0_Chr6-View
Rosa chinensisRcHm_v2.0_Chr6g0308261RcHm_v2.0_Chr6-View
Rhododendron simsiiRhsim05G0086400chr05-View
Salix brachistaSabra07G0040500GWHAAZH00000007-View
Salix brachistaSabra09G0076100GWHAAZH00000009+View
Solanum lycopersicumSolyc01g107930.3RING/U-box superfamily protein (AHRD V3.3 *-* A0A1P8B1Z6_ARATH)SL4.0ch01+View
Schrenkiella parvulaSp3g28780PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDch3-5+View
Schrenkiella parvulaSp7g31770PF13639 - Ring finger domain (zf-RING_2)ch7-5-View
Solanum pennelliiSopen01g050100RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch01+View
Solanum tuberosumPGSC0003DMG400025779RING zinc finger proteinST4.03ch01+View
Solanum tuberosumPGSC0003DMG400007954Zinc finger proteinST4.03ch04+View
Trochodendron aralioidesTAR628G0833group5+View
Trochodendron aralioidesTAR376G0642group14+View
Trochodendron aralioidesTAR381G0132group11-View
Trochodendron aralioidesTAR625G0353group4-View
Theobroma cacaoThecc.02G103000Binding proteinChromosome_2-View
Theobroma cacaoThecc.01G058900Chromosome_1-View
Tarenaya hasslerianaTHA.LOC104819572E3 ubiquitin-protein ligase MBR2-like isoform X1NW_010966177.1+View
Tarenaya hasslerianaTHA.LOC104807264E3 ubiquitin-protein ligase MBR2NW_010963495.1+View
Trifolium pratenseTPR.G12607Tp57577_TGAC_v2_LG2+View
Tripterygium wilfordiiTWI75G1870NC_052253.1-View
Tripterygium wilfordiiTWI31G1329NC_052233.1+View
Tripterygium wilfordiiTWI79G0047NC_052238.1+View
Utricularia gibbaunitig_21.g20739unitig_21+View
Vaccinium macrocarponvmacro17959Similar to HIP1: Probable E3 ubiquitin-protein ligase HIP1 (Oryza sativa subsp. japonica OX%3D39947)chr3_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro19510Similar to MBR1: E3 ubiquitin-protein ligase MBR1 (Arabidopsis thaliana OX%3D3702)chr5_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo0251G2889CM024069.1+View
Vitis viniferaGSVIVG01031717001chr3+View