Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG6G3650LG-6+View
Actinidia chinensisActinidia01897Lachesis_group0+View
Arabidopsis lyrataAL7G32300scaffold_7-View
Avicennia marinaMSTRG.7306ScioBoG_102840_HRSCAF_103099-View
Amaranthus hybridusAh.14g089300RNA polymerase II C-terminal domain phosphatase-like 1 (FCP-like 1) (EC 3.1.3.16) (Carboxyl-terminal phosphatase-like 1) (AtCPL1) (CTD phosphatase-like 1) (Protein FIERY 2) (Protein JASMONATE OVEREXPRESSING 1) (Protein SHINY 4)AmaHy_arrow1_Scaffold_14+View
Aquilegia oxysepalaAqoxy4G01071CHR04-View
Arabidopsis thalianaAT4G21670C-terminal domain phosphatase-like 1 encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA%2C cold%2C and NaCl. C-terminal domain phosphatase-like 1 (CPL1)%3B FUNCTIONS IN: double-stranded RNA binding%2C phosphatase activity%2C nucleotide phosphatase activity%3B INVOLVED IN: abscisic acid mediated signaling pathway%2C negative regulation of transcription%2C response to abiotic stimulus%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159)%2C NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2 (TAIR:AT5G01270.2)%3B Has 330 Blast hits to 317 proteins in 105 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 57%3B Fungi - 81%3B Plants - 112%3B Viruses - 1%3B Other Eukaryotes - 48 (source: NCBI BLink).Chr4+View
Amborella trichopodaATR0680G135AmTr_v1.0_scaffold00009+View
Brassica carinataBcaNung02771Contig959-View
Brassica napusC01p15610C01+View
Brassica napusA01p12960A01+View
Brassica oleraceaBolC1t01513HC1+View
Brassica rapaBraA01t01240ZA01+View
Beta vulgarisEL10Ac8g20342PTHR23081//PTHR23081:SF7 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Chr8_EL10_PGA_scaffold4+View
Camellia sinensis var. sinensisCSS0012849unnamed protein product [Coffea canephora]Chr8+View
Cannabis sativaCANSAT35G1545NC_044378.1+View
Corylus avellanaHaze_06503Similar to CPL1: RNA polymerase II C-terminal domain phosphatase-like 1 (Arabidopsis thaliana OX%3D3702)2-View
Citrus clementinaCiclev10014168m.gscaffold_2+View
Carpinus fangianaCfa000412Cfa01+View
Cardamine hirsutaCARHR228390RNA polymerase II C-terminal domain phosphatase-like 1Chr7+View
Carya illinoinensisCiPaw.09G057000PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Chr09+View
Citrullus lanatusClCG01G022810RNA polymerase II C-terminal domain phosphatase-like 1CG_Chr01+View
Cucumis meloMELO3C007299.2RNA polymerase II C-terminal domain phosphatase-like 1chr08-View
Carica papayaCpa.g.sc27.71supercontig_27-View
Chenopodium quinoaAUR62014788CPL1: RNA polymerase II C-terminal domain phosphatase-like 1C_Quinoa_Scaffold_2947+View
Chenopodium quinoaAUR62016975CPL1: RNA polymerase II C-terminal domain phosphatase-like 1C_Quinoa_Scaffold_3787+View
Cucumis sativus L.CsaV3_6G049980RNA polymerase II C-terminal domain phosphatase-like 1chr6+View
Daucus carotaDCAR_028109hypothetical proteinDCARv2_Chr8+View
Durio zibethinusDuzib235G0094NW_019167982.1-View
Durio zibethinusDuzib160G0447NW_019168015.1-View
Erigeron canadensisECA236G0114Conyza_canadensis_scaffold:3-View
Erythranthe guttataMigut.M01186scaffold_13+View
Erythranthe guttataMigut.H01509scaffold_8+View
Fragaria x ananassaFAN25G0477PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Fvb3-1-View
Fragaria x ananassaFAN21G1933PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Fvb3-2-View
Fragaria x ananassaFAN16G1429PTHR23081//PTHR23081:SF7 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Fvb3-3+View
Fragaria x ananassaFAN11G2695PTHR23081//PTHR23081:SF7 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Fvb3-4-View
Fragaria vescaFvH4_3g04830PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Fvb3+View
Lupinus albusLalb_Chr05g0218371K18998 - RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] (CPL1_2)Lalb_Chr05+View
Lupinus albusLalb_Chr20g0122001K18998 - RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16] (CPL1_2)Lalb_Chr20-View
Lactuca sativaLsat_1_v5_gn_7_19061Lsat_1_v8_lg_7+View
Malus domesticaMD10G1297000C-terminal domain phosphatase-like 1Chr10-View
Manihot esculentaManes.17G043100Chromosome17+View
Olea europaeaOeu043701.2chr19+View
Olea europaeaOeu014699.1chr13+View
Prunus persicaPrupe.4G043500PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Pp04+View
Papaver somniferumPSO541G5777NC_039363.1+View
Populus trichocarpaPotri.011G049400PTHR23081//PTHR23081:SF7 - RNA POLYMERASE II CTD PHOSPHATASE // RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1Chr11+View
Quercus lobataQL05p0394865+View
Rosa chinensisRcHm_v2.0_Chr5g0007991RcHm_v2.0_Chr5+View
Salvia bowleyanaSalBow8G5259GWHASIU00000004-View
Salvia bowleyanaSalBow7G4808GWHASIU00000005-View
Salix brachistaSabra11G0033900GWHAAZH00000011+View
Simmondsia chinensisSc17g0006300GWHAASQ00000017-View
Sechium eduleSed0024319LG10-View
Sechium eduleSed0016039LG03+View
Sechium eduleSed0007844LG14+View
Solanum lycopersicumSolyc02g078550.3RNA polymerase II C-terminal domain phosphatase-like 1 (AHRD V3.3 *** A0A2G3D6D3_CAPCH)SL4.0ch02-View
Schrenkiella parvulaSp7g19780PTHR23081:SF7 - RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1ch7-4+View
Solanum pennelliiSopen02g023400encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. | C-terminal domain phosphatase-like 1 (CPL1) | FUNCTIONS IN: double-stranded RNA binding, phosphatase activity, nucleotide phosphatase activity | INVOLVED IN: abscisic acid mediated signaling pathway, negative regulation of transcription, response to abiotic stimulus | LOCATED IN: intracellular | CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding , NLI interacting factor | BEST Arabidopsis thaliana protein match is: carboxyl-terminal domain (ctd) phosphatase-like 2Spenn-ch02-View
Solanum tuberosumPGSC0003DMG400022380Double-stranded RNA binding proteinST4.03ch02-View
Selenicereus undatusHund21246Scaffold_33680+View
Theobroma cacaoThecc.06G191200C-terminal domain phosphatase-like 1Chromosome_6-View
Tripterygium wilfordiiTWI63G0661NC_052240.1+View
Tripterygium wilfordiiTWI38G1276NC_052252.1+View
Vaccinium macrocarponvmacro15893Similar to CPL1: RNA polymerase II C-terminal domain phosphatase-like 1 (Arabidopsis thaliana OX%3D3702)chr4_Vaccinium_macrocarpon_Stevens_v1-View