Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold126G33825scaffold126+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG5G7480LG-5-View
Aethionema arabicumAa31LG1G22240LG-1+View
Aethionema arabicumAa31LG5G22910LG-5+View
Acer truncatumAtru.chr8.1931chr8+View
Acer truncatumAtru.chr3.3829chr3+View
Actinidia chinensisActinidia05295Lachesis_group20+View
Arabidopsis lyrataAL3G20660scaffold_3-View
Arabidopsis lyrataAL8G36480scaffold_8+View
Arabidopsis lyrataAL6G11840scaffold_6-View
Arabidopsis lyrataAL4G23250scaffold_4+View
Arabidopsis lyrataAL4G33930scaffold_4+View
Avicennia marinaMSTRG.5687ScioBoG_102839_HRSCAF_103093+View
Amaranthus hybridusAh.08g219050AmaHy_arrow1_Scaffold_8+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.2MB6KRK11252 - histone H2B (H2B)arahy.Tifrunner.gnm1.Arahy.03+View
Arabidopsis thalianaAT5G02570Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1)%3B Has 3216 Blast hits to 3216 proteins in 325 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2228%3B Fungi - 200%3B Plants - 462%3B Viruses - 0%3B Other Eukaryotes - 326 (source: NCBI BLink).Chr5-View
Arabidopsis thalianaAT2G37470Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1)%3B Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2242%3B Fungi - 218%3B Plants - 466%3B Viruses - 0%3B Other Eukaryotes - 367 (source: NCBI BLink).Chr2+View
Arabidopsis thalianaAT2G28720Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 3535 Blast hits to 3431 proteins in 349 species: Archae - 0%3B Bacteria - 57%3B Metazoa - 2253%3B Fungi - 226%3B Plants - 491%3B Viruses - 2%3B Other Eukaryotes - 506 (source: NCBI BLink).Chr2+View
Arabidopsis thalianaAT3G09480Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G02570.1)%3B Has 3226 Blast hits to 3226 proteins in 338 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2242%3B Fungi - 198%3B Plants - 460%3B Viruses - 0%3B Other Eukaryotes - 326 (source: NCBI BLink).Chr3-View
Brassica carinataBcaB02g10198ChrB02+View
Brassica carinataBcaB06g28245ChrB06+View
Brassica napusC04p57900C04+View
Brassica napusA07p21770A07+View
Brassica napusC02p12010C02-View
Brassica oleraceaBolC4t27315HC4+View
Brassica oleraceaBolC6t37348HC6+View
Brassica rapaBraA04t17745ZA04+View
Brassica rapaBraA07t29859ZA07+View
Cicer arietinum L.Ca_08788_v3Ca_LG3_v3-View
Cicer arietinum L.Ca_19186_v3Ca_LG6_v3-View
Coffea canephoraCc06_g02990Probable histone H2B.1chr6+View
Coffea canephoraCc01_g12380Probable histone H2B.1chr1+View
Citrus clementinaCiclev10013909m.gscaffold_6+View
Citrus clementinaCiclev10029263m.gscaffold_8+View
Cardamine hirsutaCARHR210790Histone H2BChr6+View
Cardamine hirsutaCARHR121850Histone H2BChr4+View
Cardamine hirsutaCARHR273520Histone H2BChr8+View
Carya illinoinensisCiPaw.13G098000KOG1744 - Histone H2BChr13-View
Carya illinoinensisCiPaw.10G143000K11252 - histone H2B (H2B)Chr10+View
Carya illinoinensisCiPaw.14G071100K11252 - histone H2B (H2B)Chr14-View
Citrullus lanatusClCG10G020920Histone H2BCG_Chr10+View
Citrullus lanatusClCG02G020380Histone H2BCG_Chr02-View
Cucumis meloMELO3C009279.2Histone H2Bchr04+View
Cucumis meloMELO3C013684.2histone H2Bchr11+View
Cucumis sativus L.CsaV3_3G035090Histone H2Bchr3-View
Daucus carotaDCAR_005989hypothetical proteinDCARv2_Chr2-View
Davidia involucrataDinv35638GWHABJS00000015-View
Durio zibethinusDuzib170G0929NW_019167871.1-View
Durio zibethinusDuzib168G2205NW_019168159.1-View
Durio zibethinusDuzib150G0640NW_019167882.1+View
Durio zibethinusDuzib128G0636NW_019168481.1+View
Durio zibethinusDuzib093G2084NW_019167937.1+View
Eucalyptus grandisEucgr.J02067Chr10-View
Eutrema salsugineumThhalv10014927m.gK11252 - histone H2B (H2B)scaffold_2-View
Eutrema salsugineumThhalv10017370m.gK11252 - histone H2B (H2B)scaffold_10+View
Eutrema salsugineumThhalv10017408m.gK11252 - histone H2B (H2B)scaffold_10+View
Fragaria x ananassaFAN02G4254K11252 - histone H2B (H2B)Fvb6-4-View
Fragaria x ananassaFAN09G3408K11252 - histone H2B (H2B)Fvb6-2+View
Fragaria x ananassaFAN05G0530K11252 - histone H2B (H2B)Fvb6-3+View
Fragaria x ananassaFAN14G1419K11252 - histone H2B (H2B)Fvb6-1+View
Fragaria vescaFvH4_6g14330K11252 - histone H2B (H2B)Fvb6-View
Gossypium hirsutumGohir.A04G080000K11252 - histone H2B (H2B)A04+View
Gossypium hirsutumGohir.D04G119300K11252 - histone H2B (H2B)D04+View
Gossypium hirsutumGohir.A01G219600K11252 - histone H2B (H2B)A01+View
Gossypium hirsutumGohir.D01G208700K11252 - histone H2B (H2B)D01+View
Glycine maxGlyma.19G173400K11252 - histone H2B (H2B)Gm19-View
Glycine maxGlyma.12G065100K11252 - histone H2B (H2B)Gm12-View
Glycine maxGlyma.03G172500K11252 - histone H2B (H2B)Gm03-View
Glycine maxGlyma.13G132100K11252 - histone H2B (H2B)Gm13-View
Gossypium raimondiiGorai.002G253900Chr02+View
Gossypium raimondiiGorai.009G424400Chr09+View
Lupinus albusLalb_Chr03g0026791K11252 - histone H2B (H2B)Lalb_Chr03-View
Lupinus albusLalb_Chr14g0375021K11252 - histone H2B (H2B)Lalb_Chr14+View
Lupinus albusLalb_Chr01g0003781K11252 - histone H2B (H2B)Lalb_Chr01-View
Lupinus albusLalb_Chr19g0137711K11252 - histone H2B (H2B)Lalb_Chr19-View
Lotus japonicusLj5g0001274K11252 - histone H2B (H2B)chr5+View
Lotus japonicusLj1g0012441K11252 - histone H2B (H2B)chr1+View
Lotus japonicusLj3g0019527K11252 - histone H2B (H2B)chr3-View
Lonicera japonicaLj2P1056T29GWHAAZE00000002-View
Lonicera japonicaLj1P157T37GWHAAZE00000001-View
Lactuca sativaLsat_1_v5_gn_1_55740K11252 - histone H2B (H2B)Lsat_1_v8_lg_1-View
Malus domesticaMD04G1120800Histone superfamily proteinChr04+View
Malus domesticaMD11G1112800Histone superfamily proteinChr11-View
Malus domesticaMD12G1138100Histone superfamily proteinChr12+View
Manihot esculentaManes.08G076860Chromosome08-View
Manihot esculentaManes.04G031500Chromosome04+View
Medicago truncatulaMedtr4g063200core histone H2A/H2B/H3/H4chr4+View
Medicago truncatulaMedtr1g068600histone H2A 6chr1+View
Medicago truncatulaMedtr7g099960core histone H2A/H2B/H3/H4chr7-View
Nelumbo nuciferaNn2g12893chr2-View
Oryza sativa ssp. japonicaOs05g0460475Similar to Histone H2B.11.chr05+View
Oryza sativa ssp. japonicaOs01g0839500Histone-fold domain containing protein.chr01-View
Oryza sativa ssp. japonicaOs03g0279000Similar to Histone H2B.1.chr03+View
Punica granatumPGR004G0166NC_045131.1+View
Punica granatumPGR102G2144NC_045129.1+View
Prunus persicaPrupe.6G250100K11252 - histone H2B (H2B)Pp06+View
Pisum sativumPsat6g067800Histone H2B signaturechr6LG2-View
Phaseolus vulgarisPhvul.007G158200K11252 - histone H2B (H2B)Chr07-View
Phaseolus vulgarisPhvul.011G066100K11252 - histone H2B (H2B)Chr11-View
Quercus lobataQL07p0471697+View
Rosa chinensisRcHm_v2.0_Chr3g0467331RcHm_v2.0_Chr3-View
Rhododendron simsiiRhsim01G0224900chr01+View
Rhododendron simsiiRhsim13G0085200chr13+View
Simmondsia chinensisSc12g0001640GWHAASQ00000012+View
Sechium eduleSed0013490LG05+View
Sechium eduleSed0010120LG04-View
Schrenkiella parvulaSp6g21620K11252 - histone H2B (H2B)ch6-6+View
Schrenkiella parvulaSp4g11580K11252 - histone H2B (H2B)ch4-6+View
Schrenkiella parvulaSp3g07850K11252 - histone H2B (H2B)ch3-1-View
Solanum tuberosumPGSC0003DMG400029167Histone H2B.11ST4.03ch06-View
Selenicereus undatusHund18935Scaffold_33675-View
Trochodendron aralioidesTAR633G2668group2-View
Theobroma cacaoThecc.05G044700Histone superfamily proteinChromosome_5-View
Tarenaya hasslerianaTHA.LOC104823425probable histone H2B.3NW_010966881.1-View
Tarenaya hasslerianaTHA.LOC104826343histone H2B.11-likeNW_010967707.1+View
Tarenaya hasslerianaTHA.LOC104800646histone H2BNW_010969548.1+View
Trifolium pratenseTPR.G37816Tp57577_TGAC_v2_LG1+View
Tripterygium wilfordiiTWI79G0399NC_052238.1-View
Vaccinium macrocarponvmacro03095Similar to HIS2B: Histone H2B (Gossypium hirsutum OX%3D3635)chr9_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1127G1951CM024076.1-View
Vanilla planifoliaHPP92_014315Histone H2B ***CM028155.1-View
Vitis viniferaGSVIVG01025025001chr6+View
Zea maysZm00001eb368020Zm00001e028779 Histone H2B8+View
Zea maysZm00001eb397510Zm00001e038466 Histone H2B9-View
Zea maysZm00001eb148540Zm00001e019346 Histone H2B histone 2B43+View