Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold111G31539scaffold111+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG6G15680LG-6+View
Acer truncatumAtru.chr13.435chr13-View
Avicennia marinaMSTRG.21244ScioBoG_26769_HRSCAF_26899+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.KIB2TDPF09531//PF13041//PF14432 - Nucleoporin protein Ndc1-Nup (Ndc1_Nup) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)arahy.Tifrunner.gnm1.Arahy.10-View
Arabidopsis thalianaAT4G39530Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 58623 Blast hits to 14407 proteins in 286 species: Archae - 2%3B Bacteria - 7%3B Metazoa - 151%3B Fungi - 177%3B Plants - 57378%3B Viruses - 0%3B Other Eukaryotes - 908 (source: NCBI BLink).Chr4-View
Capsicum annuumCAN.G1226.47PGAv.1.6.scaffold1226+View
Cardamine hirsutaCARHR247200Pentatricopeptide repeat-containing proteinChr7+View
Durio zibethinusDuzib041G0426NW_019167826.1-View
Eutrema salsugineumThhalv10027184m.gPF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)scaffold_1-View
Fragaria x ananassaFAN27G0420K19355 - mannan endo-1,4-beta-mannosidase (MAN)Fvb2-1-View
Fragaria x ananassaFAN20G1674K19355 - mannan endo-1,4-beta-mannosidase (MAN)Fvb2-3+View
Fragaria vescaFvH4_1g20891PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)Fvb1+View
Schrenkiella parvulaSp7g36350PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)ch7-6+View
Trochodendron aralioidesTAR628G0083group5+View