Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold73G24355scaffold73+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG4G2560LG-4+View
Actinidia chinensisActinidia04594Lachesis_group5-View
Actinidia chinensisActinidia35179Lachesis_group2+View
Arabidopsis lyrataAL2G38760scaffold_2-View
Avicennia marinaMSTRG.15006ScioBoG_19538_HRSCAF_19626-View
Avicennia marinaMSTRG.14273ScioBoG_18782_HRSCAF_18867+View
Avicennia marinaMSTRG.6709ScioBoG_102840_HRSCAF_103099-View
Arabidopsis thalianaAT1G78390nine-cis-epoxycarotenoid dioxygenase 9 Encodes 9-cis-epoxycarotenoid dioxygenase%2C a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 9 (NCED9)%3B CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294)%3B BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 3 (TAIR:AT3G14440.1)%3B Has 2892 Blast hits to 2853 proteins in 497 species: Archae - 16%3B Bacteria - 810%3B Metazoa - 240%3B Fungi - 201%3B Plants - 889%3B Viruses - 0%3B Other Eukaryotes - 736 (source: NCBI BLink).Chr1-View
Brassica napusC06p52330C06-View
Brassica rapaBraA03t13031ZA03-View
Camellia sinensis var. sinensisCSS0033791hypothetical protein VITISV_018449 [Vitis vinifera]Chr7+View
Capsicum annuumCAN.G1003.11PGAv.1.6.scaffold1003+View
Cannabis sativaCANSAT56G3902NC_044371.1-View
Corylus avellanaHaze_08498Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Phaseolus vulgaris OX%3D3885)4+View
Coffea canephoraCc05_g102109-cis-epoxycarotenoid dioxygenase NCED1, chloroplasticchr5-View
Citrus clementinaCiclev10019364m.gscaffold_3-View
Cardamine hirsutaCARHR0719009-cis-epoxycarotenoid dioxygenase, putativeChr2-View
Citrullus lanatusClCG07G0105509-cis-epoxycarotenoid dioxygenaseCG_Chr07+View
Chenopodium quinoaAUR62017575Protein of unknown functionC_Quinoa_Scaffold_3458-View
Capsella rubellaCarub.0002s2529PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDscaffold_2-View
Cucumis sativus L.CsaV3_4G0077609-cis-epoxycarotenoid dioxygenasechr4-View
Daucus carotaDCAR_0175639-cis-epoxycarotenoid dioxygenaseDCARv2_Chr5+View
Daucus carotaDCAR_0210599-cis-epoxycarotenoid dioxygenaseDCARv2_Chr6-View
Daucus carotaDCAR_0196399-cis-epoxycarotenoid dioxygenaseDCARv2_Chr5+View
Davidia involucrataDinv13307GWHABJS00000001-View
Davidia involucrataDinv26663GWHABJS00000013+View
Durio zibethinusDuzib268G0173NW_019168270.1+View
Durio zibethinusDuzib213G0928NW_019167993.1+View
Durio zibethinusDuzib192G0340NW_019168037.1+View
Erigeron canadensisECA234G3656Conyza_canadensis_scaffold:4+View
Erigeron canadensisECA236G3052Conyza_canadensis_scaffold:3-View
Eucalyptus grandisEucgr.F03199Chr06-View
Erythranthe guttataMigut.H02072scaffold_8-View
Erythranthe guttataMigut.M00656scaffold_13+View
Eutrema salsugineumThhalv10019707m.gPTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDscaffold_9+View
Fragaria x ananassaFAN25G1277PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDFvb3-1-View
Fragaria x ananassaFAN21G3899PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDFvb3-2+View
Gossypium hirsutumGohir.A01G041300K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED)A01-View
Glycine maxGlyma.15G250100PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDGm15+View
Lupinus albusLalb_Chr25g0285361K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED)Lalb_Chr25-View
Lonicera japonicaLj1P809T13GWHAAZE00000001-View
Lonicera japonicaLj8C141T9GWHAAZE00000008-View
Lactuca sativaLsat_1_v5_gn_7_100040Lsat_1_v8_lg_7-View
Medicago truncatulaMedtr2g0704609-cis-epoxycarotenoid dioxygenasechr2-View
Olea europaeaOeu012719.1chr6-View
Olea europaeaOeu058431.1chr21-View
Petunia axillarisPeaxi162Scf00111g00077nine-cis-epoxycarotenoid dioxygenase 3Peaxi162Scf00111-View
Punica granatumPGR031G1042NC_045127.1-View
Prunus persicaPrupe.4G150100PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATEDPp04+View
Pisum sativumPsat1g001480Retinal pigment epithelial membrane proteinchr1LG6+View
Salvia bowleyanaSalBow7G3817GWHASIU00000005+View
Solanum lycopersicumSolyc07g056570.1notabilisSL4.0ch07-View
Solanum pennelliiSopen07g029920Encodes 9-Spenn-ch07-View
Solanum tuberosumPGSC0003DMG4000276339-cis-epoxycarotenoid dioxygenaseST4.03ch07-View
Trochodendron aralioidesTAR627G1053group6-View
Trochodendron aralioidesTAR626G1577group3+View
Theobroma cacaoThecc.07G147400Nine-cis-epoxycarotenoid dioxygenase 3Chromosome_7+View
Tarenaya hasslerianaTHA.LOC1048104109-cis-epoxycarotenoid dioxygenase NCED3%2C chloroplastic-likeNW_010965216.1-View
Utricularia gibbaunitig_747.g21596unitig_747-View
Vaccinium macrocarponvmacro12018Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Solanum lycopersicum OX%3D4081)chr11_Vaccinium_macrocarpon_Stevens_v1+View