Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold71G23935scaffold71-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG4G2670LG-4+View
Aethionema arabicumAa31LG10G1500LG-10-View
Actinidia chinensisActinidia24419Lachesis_group27-View
Arabidopsis lyrataAL2G31890scaffold_2-View
Arabidopsis lyrataAL1G62510scaffold_1+View
Avicennia marinaMSTRG.10906ScioBoG_14204_HRSCAF_14270+View
Avicennia marinaMSTRG.9545ScioBoG_12795_HRSCAF_12848-View
Amaranthus hybridusAh.08g217410RING-H2 finger protein ATL60 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL60)AmaHy_arrow1_Scaffold_8-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.75YBZZPTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3arahy.Tifrunner.gnm1.Arahy.02+View
Arabidopsis thalianaAT1G53820RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1)%3B Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2391%3B Fungi - 736%3B Plants - 4843%3B Viruses - 80%3B Other Eukaryotes - 1251 (source: NCBI BLink).Chr1+View
Arabidopsis thalianaAT1G72220RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: inflorescence meristem%2C root%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1)%3B Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 2351%3B Fungi - 909%3B Plants - 4998%3B Viruses - 86%3B Other Eukaryotes - 1433 (source: NCBI BLink).Chr1-View
Brassica carinataBcaB04g18839ChrB04-View
Brassica carinataBcaC03g15350ChrC03-View
Brassica rapaBraA07t31396ZA07-View
Brassica rapaBraA03t13024ZA03-View
Cicer arietinum L.Ca_23450_v3Ca_LG7_v3-View
Corylus avellanaHaze_16142Similar to ATL43: RING-H2 finger protein ATL43 (Arabidopsis thaliana OX%3D3702)11-View
Coffea canephoraCc04_g00640Putative RING-H2 finger protein ATL3chr4+View
Citrus clementinaCiclev10026808m.gscaffold_7-View
Cardamine hirsutaCARHR044110Ring finger protein, putativeChr1+View
Cardamine hirsutaCARHR065080Ring finger protein, putativeChr2-View
Citrullus lanatusClCG09G001420Ring finger protein, putativeCG_Chr09-View
Cucumis meloMELO3C024304.2RING-H2 finger protein ATL60-likechr01+View
Carica papayaCpa.g.sc25.200supercontig_25-View
Chenopodium quinoaAUR62025610ATL60: RING-H2 finger protein ATL60C_Quinoa_Scaffold_1677+View
Chenopodium quinoaAUR62001395ATL60: RING-H2 finger protein ATL60C_Quinoa_Scaffold_2716+View
Capsella rubellaCarub.0002s1903PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDscaffold_2-View
Capsella rubellaCarub.0001s4308PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3scaffold_1+View
Cucumis sativus L.CsaV3_7G033910RING-H2 finger protein ATL60-likechr7+View
Daucus carotaDCAR_007663hypothetical proteinDCARv2_Chr2-View
Daucus carotaDCAR_016088hypothetical proteinDCARv2_Chr5+View
Davidia involucrataDinv20377GWHABJS00000019-View
Durio zibethinusDuzib160G0682NW_019168015.1-View
Durio zibethinusDuzib192G0039NW_019168037.1+View
Durio zibethinusDuzib235G0123NW_019167982.1-View
Erigeron canadensisECA232G2925Conyza_canadensis_scaffold:2-View
Eucalyptus grandisEucgr.J02590Chr10+View
Erythranthe guttataMigut.I01138scaffold_9-View
Eutrema salsugineumThhalv10012011m.gPTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3scaffold_7-View
Gossypium hirsutumGohir.A05G141900PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3A05-View
Gossypium hirsutumGohir.D05G144200PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3D05-View
Gossypium hirsutumGohir.A10G048000PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3A10+View
Glycine maxGlyma.07G046400PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3Gm07-View
Glycine maxGlyma.16G014600PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3Gm16-View
Gossypium raimondiiGorai.009G148100Chr09-View
Helianthus annuusHanXRQChr15g0497291Probable RING/U-box superfamily proteinHanXRQChr15-View
Hydrangea macrophyllaHma1.2p1_0090F.1_g045730Hma1.2p1_0090F.1+View
Lupinus albusLalb_Chr10g0101081PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3Lalb_Chr10+View
Lotus japonicusLj3g0025964PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3chr3-View
Lonicera japonicaLj9C539T22GWHAAZE00000009-View
Lonicera japonicaLj5C28T7GWHAAZE00000005+View
Lactuca sativaLsat_1_v5_gn_4_90761PTHR14155//PTHR14155:SF122 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDLsat_1_v8_lg_4+View
Medicago truncatulaMedtr8g023400zinc finger, C3HC4 type (RING finger) proteinchr8-View
Petunia axillarisPeaxi162Scf00207g01514RING-H2 finger protein ATL3Peaxi162Scf00207-View
Punica granatumPGR119G0984NC_045132.1-View
Phaseolus vulgarisPhvul.009G223100K10663 - E3 ubiquitin-protein ligase ATL4 [EC:6.3.2.19] (ATL4)Chr09+View
Phaseolus vulgarisPhvul.010G122500PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3Chr10+View
Simmondsia chinensisSc15g0000820GWHAASQ00000015-View
Simmondsia chinensisSc08g0009300GWHAASQ00000008+View
Solanum lycopersicumSolyc03g123690.1RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L356_ARTAN)SL4.0ch03-View
Schrenkiella parvulaSp1g40310PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3ch1-2+View
Schrenkiella parvulaSp5g27310PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATEDch5-6-View
Solanum pennelliiSopen03g041460hypothetical proteinSpenn-ch03-View
Trochodendron aralioidesTAR626G0295group3+View
Theobroma cacaoThecc.06G130900RING-H2 finger protein ATL3Chromosome_6-View
Tarenaya hasslerianaTHA.LOC104810397RING-H2 finger protein ATL60NW_010965216.1-View
Tripterygium wilfordiiTWI14G0372NC_052249.1+View
Tripterygium wilfordiiTWI59G0054NC_052248.1+View
Vigna mungoVMungo0331G0606CM024078.1-View