Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold71G23924scaffold71-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr1.4155chr1-View
Actinidia chinensisActinidia21838Lachesis_group1+View
Actinidia chinensisActinidia24427Lachesis_group27-View
Arabidopsis lyrataAL3G26620scaffold_3-View
Arabidopsis lyrataAL1G62540scaffold_1+View
Avicennia marinaMSTRG.10909ScioBoG_14204_HRSCAF_14270+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.G3J01CPTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATEDarahy.Tifrunner.gnm1.Arahy.02+View
Arabidopsis thalianaAT1G53830pectin methylesterase 2 encodes a pectin methylesterase pectin methylesterase 2 (PME2)%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: extracellular region%2C plant-type cell wall%3B EXPRESSED IN: sepal%2C flower%2C root%2C carpel%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectinesterase%2C active site (InterPro:IPR018040)%2C Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectinesterase inhibitor (InterPro:IPR006501)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: pectin methylesterase 3 (TAIR:AT3G14310.1)%3B Has 3028 Blast hits to 2957 proteins in 336 species: Archae - 6%3B Bacteria - 620%3B Metazoa - 1%3B Fungi - 201%3B Plants - 2174%3B Viruses - 0%3B Other Eukaryotes - 26 (source: NCBI BLink).Chr1+View
Arabidopsis thalianaAT3G14300pectinesterase family protein ATPMEPCRC%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: cell wall%3B EXPRESSED IN: flower%3B CONTAINS InterPro DOMAIN/s: Pectinesterase%2C active site (InterPro:IPR018040)%2C Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectinesterase inhibitor (InterPro:IPR006501)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: pectin methylesterase 1 (TAIR:AT1G53840.1)%3B Has 4699 Blast hits to 3111 proteins in 352 species: Archae - 11%3B Bacteria - 646%3B Metazoa - 6%3B Fungi - 210%3B Plants - 3801%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink).Chr3-View
Brassica carinataBcaC08g44137ChrC08+View
Brassica carinataBcaC08g43560ChrC08+View
Brassica carinataBcaC05g29095ChrC05+View
Brassica carinataBcaB04g18836ChrB04-View
Brassica carinataBcaC01g03937ChrC01+View
Brassica carinataBcaB02g10885ChrB02-View
Brassica napusC06p15370C06+View
Brassica napusA03p38740A03-View
Brassica napusC06p09610C06+View
Brassica napusA05p35090A05+View
Brassica napusA06p00750A06-View
Brassica oleraceaBolC6t36709HC6+View
Brassica oleraceaBolC6t36033HC6+View
Brassica oleraceaBolC3t16954HC3-View
Brassica rapaBraA03t13022ZA03-View
Brassica rapaBraA01t03979ZA01+View
Brassica rapaBraA06t23309ZA06-View
Brassica rapaBraA05t22322ZA05+View
Beta vulgarisEL10Ac7g16495PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATEDChr7_EL10_PGA_scaffold5-View
Camellia sinensis var. sinensisCSS0041029Pectinesterase 3 [Gossypium arboreum]Chr15+View
Capsicum annuumCAN.G790.57PGAv.1.6.scaffold790+View
Cannabis sativaCANSAT56G2197NC_044371.1-View
Cicer arietinum L.Ca_23446_v3Ca_LG7_v3-View
Corylus avellanaHaze_16136Similar to MPE3: Pectinesterase 3 (Phaseolus vulgaris OX%3D3885)11-View
Coffea canephoraCc04_g00680Pectinesterase/pectinesterase inhibitor U1chr4+View
Citrus clementinaCiclev10025232m.gscaffold_7-View
Ceratophyllum demersumCDE05G25473-View
Carpinus fangianaCfa003460Cfa01+View
Cardamine hirsutaCARHR044140PectinesteraseChr1+View
Carya illinoinensisCiPaw.02G130900PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATEDChr02+View
Carya illinoinensisCiPaw.01G211400PTHR31707:SF55 - PECTINESTERASE 2-RELATEDChr01+View
Citrullus lanatusClCG09G001400PectinesteraseCG_Chr09-View
Cucumis meloMELO3C024306.2pectinesterase-likechr01+View
Carica papayaCpa.g.sc25.193supercontig_25-View
Chenopodium quinoaAUR62001403Pectinesterase 3C_Quinoa_Scaffold_2716+View
Chenopodium quinoaAUR62025614Pectinesterase 3C_Quinoa_Scaffold_1677+View
Capsella rubellaCarub.0001s4311PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATEDscaffold_1+View
Capsella rubellaCarub.0003s1383PTHR31707:SF42 - PECTINESTERASE 1-RELATEDscaffold_3+View
Cucumis sativus L.CsaV3_3G031020Pectinesterasechr3-View
Cucumis sativus L.CsaV3_7G033930Pectinesterasechr7+View
Daucus carotaDCAR_016089hypothetical proteinDCARv2_Chr5+View
Daucus carotaDCAR_022649hypothetical proteinDCARv2_Chr6-View
Davidia involucrataDinv20383GWHABJS00000019-View
Durio zibethinusDuzib235G0550NW_019167982.1-View
Erigeron canadensisECA234G3528Conyza_canadensis_scaffold:4+View
Erigeron canadensisECA232G4916Conyza_canadensis_scaffold:2-View
Erythranthe guttataMigut.L01600scaffold_12-View
Erythranthe guttataMigut.D00910scaffold_4+View
Erythranthe guttataMigut.I01132scaffold_9-View
Eutrema salsugineumThhalv10020354m.gPTHR31707:SF55 - PECTINESTERASE 2-RELATEDscaffold_13+View
Eutrema salsugineumThhalv10011342m.gPTHR31707:SF42 - PECTINESTERASE 1-RELATEDscaffold_7-View
Fragaria x ananassaFAN02G4144PTHR31707:SF42 - PECTINESTERASE 1-RELATEDFvb6-4-View
Gossypium hirsutumGohir.A07G017700PTHR31707:SF19 - PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATEDA07-View
Gossypium hirsutumGohir.A05G141600PTHR31707:SF42 - PECTINESTERASE 1-RELATEDA05-View
Gossypium hirsutumGohir.D05G143900PTHR31707:SF42 - PECTINESTERASE 1-RELATEDD05-View
Gossypium hirsutumGohir.D07G017500PTHR31707:SF19 - PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATEDD07-View
Gossypium hirsutumGohir.D13G195700PTHR31707//PTHR31707:SF39 - FAMILY NOT NAMED // PECTINESTERASE/PECTINESTERASE INHIBITOR 12-RELATEDD13+View
Gossypium hirsutumGohir.A10G047600PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATEDA10+View
Glycine maxGlyma.07G045967PTHR31707:SF42 - PECTINESTERASE 1-RELATEDGm07-View
Glycine maxGlyma.16G014000PTHR31707:SF42 - PECTINESTERASE 1-RELATEDGm16-View
Gossypium raimondiiGorai.009G147800Chr09-View
Helianthus annuusHanXRQChr10g0311761Probable pectin methylesterase 1HanXRQChr10-View
Helianthus annuusHanXRQChr12g0360071Putative pectinesterase inhibitor domain; Pectin lyase fold/virulence factorHanXRQChr12+View
Helianthus annuusHanXRQChr09g0277261Probable pectin methylesterase 2HanXRQChr09-View
Hydrangea macrophyllaHma1.2p1_0090F.1_g045840Hma1.2p1_0090F.1+View
Lupinus albusLalb_Chr04g0253941PTHR31707:SF42 - PECTINESTERASE 1-RELATEDLalb_Chr04-View
Lupinus albusLalb_Chr07g0181471PTHR31707//PTHR31707:SF3 - FAMILY NOT NAMED // PECTINESTERASE/PECTINESTERASE INHIBITOR 13-RELATEDLalb_Chr07-View
Lupinus albusLalb_Chr17g0343211PTHR31707:SF55 - PECTINESTERASE 2-RELATEDLalb_Chr17+View
Lupinus albusLalb_Chr11g0073831PTHR31707:SF10 - PECTINESTERASE/PECTINESTERASE INHIBITOR 32-RELATEDLalb_Chr11+View
Lupinus albusLalb_Chr12g0200371PTHR31707//PTHR31707:SF10 - FAMILY NOT NAMED // PECTINESTERASE/PECTINESTERASE INHIBITOR 32-RELATEDLalb_Chr12-View
Lotus japonicusLj3g0026078PTHR31707:SF55 - PECTINESTERASE 2-RELATEDchr3-View
Lonicera japonicaLj5A29T57GWHAAZE00000005+View
Lonicera japonicaLj9C538G10GWHAAZE00000009-View
Lactuca sativaLsat_1_v5_gn_5_137800Lsat_1_v8_lg_5-View
Magnolia biondiiMBI19_g32873_MAGBIOAED:0.04Chr19-View
Malus domesticaMD09G1172600pectin methylesterase 3Chr09+View
Malus domesticaMD17G1154400pectin methylesterase 1Chr17-View
Manihot esculentaManes.11G012500Chromosome11+View
Manihot esculentaManes.04G151000Chromosome04-View
Medicago truncatulaMedtr8g023150pectinesterase/pectinesterase inhibitorchr8-View
Nicotiana tabacumNitab4.5_0000357g0140Pectinesterase inhibitor domain, Pectin lyase fold/virulence factor, Pectin lyase fold, Pectinesterase, active site, Pectinesterase, catalyticNitab4.5_0000357-View
Olea europaeaOeu006750.1chr1+View
Punica granatumPGR119G0854NC_045132.1-View
Punica granatumPGR044G2443NC_045134.1-View
Punica granatumPGR102G1887NC_045129.1-View
Prunus persicaPrupe.3G031000PTHR31707:SF55 - PECTINESTERASE 2-RELATEDPp03+View
Populus trichocarpaPotri.001G162400K01051 - pectinesterase (E3.1.1.11)Chr01+View
Populus trichocarpaPotri.003G072700PTHR31707:SF42 - PECTINESTERASE 1-RELATEDChr03-View
Phaseolus vulgarisPhvul.010G123066PTHR31707:SF55 - PECTINESTERASE 2-RELATEDChr10+View
Rhododendron simsiiRhsim08G0244700chr08-View
Salvia bowleyanaSalBow7G0201GWHASIU00000005-View
Salvia bowleyanaSalBow6G5799GWHASIU00000002-View
Salix brachistaSabra01G0130000GWHAAZH00000001-View
Salix brachistaSabra03G0043500GWHAAZH00000003-View
Simmondsia chinensisSc08g0009150GWHAASQ00000008-View
Sechium eduleSed0004119LG06+View
Solanum lycopersicumSolyc03g123620.4Pectinesterase (AHRD V3.3 *** A0A2G3D1E1_CAPCH)SL4.0ch03-View
Schrenkiella parvulaSp3g12560K01051 - pectinesterase (E3.1.1.11)ch3-1+View
Schrenkiella parvulaSp1g40320PTHR31707:SF55 - PECTINESTERASE 2-RELATEDch1-2+View
Solanum pennelliiSopen03g041390Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Phaseolus vulgaris (Kidney bean) (French bean), encodes a pectin methylesterase | pectin methylesterase 1 (PME1) | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: cell wall modification | LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pectinesterase, active site , Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectinesterase inhibitor , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: pectinesterase family proteinSpenn-ch03-View
Selenicereus undatusHund05702Scaffold_19641+View
Trochodendron aralioidesTAR626G1978group3+View
Trochodendron aralioidesTAR624G1370group9+View
Trochodendron aralioidesTAR636G2907group1-View
Theobroma cacaoThecc.06G130200Pectinesterase 3Chromosome_6-View
Tarenaya hasslerianaTHA.LOC104816058pectinesterase 2-likeNW_010965696.1+View
Tarenaya hasslerianaTHA.LOC104810394pectinesterase-likeNW_010965216.1-View
Tripterygium wilfordiiTWI23G0515NC_052239.1-View
Tripterygium wilfordiiTWI59G0275NC_052248.1+View
Tripterygium wilfordiiTWI14G1402NC_052249.1+View
Vaccinium macrocarponvmacro15088Similar to MPE3: Pectinesterase 3 (Phaseolus vulgaris OX%3D3885)chr7_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo0331G1482CM024078.1-View
Vitis viniferaGSVIVG01016667001chr9+View