Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold63G21657scaffold63-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG4G11120LG-4+View
Acer truncatumAtru.chr11.1800chr11-View
Actinidia chinensisActinidia31204Lachesis_group12-View
Arabidopsis lyrataAL2G28810scaffold_2-View
Avicennia marinaMSTRG.2347ScioBoG_102834_HRSCAF_103055-View
Avicennia marinaMSTRG.13419ScioBoG_18778_HRSCAF_18863+View
Avicennia marinaMSTRG.7807ScioBoG_102841_HRSCAF_103114-View
Avicennia marinaMSTRG.696ScioBoG_102831_HRSCAF_103044+View
Arabidopsis thalianaAT1G69640sphingoid base hydroxylase 1 Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. sphingoid base hydroxylase 1 (SBH1)%3B CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694)%3B BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 2 (TAIR:AT1G14290.1)%3B Has 2400 Blast hits to 2339 proteins in 395 species: Archae - 0%3B Bacteria - 406%3B Metazoa - 416%3B Fungi - 708%3B Plants - 429%3B Viruses - 3%3B Other Eukaryotes - 438 (source: NCBI BLink).Chr1-View
Amborella trichopodaATR0564G064AmTr_v1.0_scaffold00010+View
Brassica carinataBcaB03g14742ChrB03-View
Brassica carinataBcaC08g46412ChrC08-View
Brassica carinataBcaC03g15102ChrC03-View
Brassica napusA07p36040A07-View
Brassica oleraceaBolC6t39419HC6-View
Brassica rapaBraA02t06663ZA02-View
Beta vulgarisEL10Ac6g131941.14.13.169 - Transferred entry: 1.14.18.5Chr6_EL10_PGA_scaffold0+View
Corylus avellanaHaze_12019Similar to SBH2: Sphinganine C4-monooxygenase 2 (Arabidopsis thaliana OX%3D3702)9-View
Corylus avellanaHaze_14547Similar to SBH2: Sphinganine C4-monooxygenase 2 (Arabidopsis thaliana OX%3D3702)5-View
Coffea canephoraCc11_g13090Sphingoid base hydroxylase 2chr11-View
Citrus clementinaCiclev10032432m.gscaffold_4+View
Carpinus fangianaCfa008991Cfa03-View
Cardamine hirsutaCARHR025070Protein SUR2Chr1+View
Cardamine hirsutaCARHR062580Protein SUR2Chr2-View
Carya illinoinensisCiPaw.05G1364001.14.13.169 - Transferred entry: 1.14.18.5Chr05-View
Carya illinoinensisCiPaw.06G0840001.14.13.169 - Transferred entry: 1.14.18.5Chr06+View
Citrullus lanatusClCG05G024350Methylsterol monooxygenase 1CG_Chr05-View
Cucumis meloMELO3C012088.2sphinganine C4-monooxygenase 2chr10-View
Chenopodium quinoaAUR62028789SBH2: Sphinganine C4-monooxygenase 2C_Quinoa_Scaffold_2837-View
Capsella rubellaCarub.0001s2411PTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDscaffold_1+View
Capsella rubellaCarub.0002s16311.14.13.169 - Transferred entry: 1.14.18.5scaffold_2-View
Daucus carotaDCAR_027408hypothetical proteinDCARv2_Chr8-View
Daucus carotaDCAR_031026hypothetical proteinDCARv2_Chr9-View
Davidia involucrataDinv34161GWHABJS00000008-View
Davidia involucrataDinv16638GWHABJS00000018+View
Durio zibethinusDuzib248G1116NW_019168048.1+View
Durio zibethinusDuzib251G0019NW_019167971.1-View
Eucalyptus grandisEucgr.B03436Chr02-View
Erythranthe guttataMigut.E00097scaffold_5-View
Eutrema salsugineumThhalv10019024m.gPTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDscaffold_9+View
Eutrema salsugineumThhalv10008529m.gPTHR11863//PTHR11863:SF43 - STEROL DESATURASE // SUBFAMILY NOT NAMEDscaffold_5+View
Fragaria x ananassaFAN12G2116PF04116//PF05460 - Fatty acid hydroxylase superfamily (FA_hydroxylase) // Origin recognition complex subunit 6 (ORC6) (ORC6)Fvb4-3+View
Fragaria x ananassaFAN22G0211K04713 - sphinganine C4-monooxygenase (SUR2)Fvb4-1-View
Fragaria x ananassaFAN17G1439PTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDFvb4-2+View
Fragaria vescaFvH4_4g314511.14.13.169 - Transferred entry: 1.14.18.5Fvb4-View
Gossypium hirsutumGohir.A12G165300K04713 - sphinganine C4-monooxygenase (SUR2)A12-View
Glycine maxGlyma.01G046500PTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDGm01+View
Glycine maxGlyma.02G106700PTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDGm02+View
Lotus japonicusLj2g00167971.14.13.169 - Transferred entry: 1.14.18.5chr2+View
Lonicera japonicaLj6A788T58GWHAAZE00000006-View
Lonicera japonicaLj3A1038T62GWHAAZE00000003-View
Lactuca sativaLsat_1_v5_gn_8_529201.14.13.169 - Transferred entry: 1.14.18.5Lsat_1_v8_lg_8-View
Magnolia biondiiMBI02_g39065_MAGBIOAED:0.14Chr02-View
Malus domesticaMD16G1073700sphingoid base hydroxylase 2Chr16-View
Malus domesticaMD13G1072900sphingoid base hydroxylase 2Chr13-View
Manihot esculentaManes.05G100600Chromosome05+View
Punica granatumPGR102G3312NC_045129.1+View
Prunus persicaPrupe.1G273200PTHR11863//PTHR11863:SF52 - STEROL DESATURASE // SUBFAMILY NOT NAMEDPp01+View
Papaver somniferumPSO478G4028NC_039361.1-View
Quercus lobataQL03p0643593-View
Rosa chinensisRcHm_v2.0_Chr4g0439941RcHm_v2.0_Chr4-View
Simmondsia chinensisSc11g0001870GWHAASQ00000011+View
Sechium eduleSed0006041LG06-View
Solanum lycopersicumSolyc05g007460.3Sphinganine C(4)-monooxygenase 1 (AHRD V3.3 *** A0A2G3B7R8_CAPCH)SL4.0ch05+View
Schrenkiella parvulaSp5g247701.14.13.169 - Transferred entry: 1.14.18.5ch5-6-View
Solanum pennelliiSopen05g003340Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. | sphingoid base hydroxylase 2 (SBH2) | CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase | BEST Arabidopsis thaliana protein match is: sphingoid base hydroxylase 1Spenn-ch05+View
Solanum tuberosumPGSC0003DMG402025549Protein SUR2ST4.03ch05-View
Selenicereus undatusHund05885Scaffold_19641-View
Selenicereus undatusHund25249Scaffold_3410-View
Trochodendron aralioidesTAR629G2891group0-View
Trochodendron aralioidesTAR371G0415group13+View
Tarenaya hasslerianaTHA.LOC104805155sphinganine C4-monooxygenase 2NW_010961290.1+View
Tarenaya hasslerianaTHA.LOC104822918sphinganine C4-monooxygenase 1NW_010966822.1-View
Utricularia gibbaunitig_22.g5548unitig_22+View
Utricularia gibbaunitig_749.g13230unitig_749-View
Vitis viniferaGSVIVG01020000001chr1+View