Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold198G41098scaffold198-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG6G630LG-6+View
Arabidopsis lyrataAL7G36630scaffold_7-View
Avicennia marinaMSTRG.12161ScioBoG_17730_HRSCAF_17811+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.A7Q6YJPTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15arahy.Tifrunner.gnm1.Arahy.05+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.0EZ7EAPTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15arahy.Tifrunner.gnm1.Arahy.15+View
Arabidopsis thalianaAT4G17895ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20 (UBP20)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).Chr4+View
Corylus avellanaHaze_08220Similar to UBP20: Ubiquitin carboxyl-terminal hydrolase 20 (Arabidopsis thaliana OX%3D3702)4-View
Carpinus fangianaCfa012444Cfa05+View
Chenopodium quinoaAUR62018709UBP20: Ubiquitin carboxyl-terminal hydrolase 20C_Quinoa_Scaffold_1817-View
Chenopodium quinoaAUR62007296UBP20: Ubiquitin carboxyl-terminal hydrolase 20C_Quinoa_Scaffold_1971+View
Daucus carotaDCAR_008266hypothetical proteinDCARv2_Chr2-View
Durio zibethinusDuzib068G0882NW_019167838.1-View
Eutrema salsugineumThhalv10024586m.gPTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASEscaffold_1-View
Gossypium hirsutumGohir.D03G171800PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASED03+View
Gossypium raimondiiGorai.003G182400Chr03+View
Lupinus albusLalb_Chr05g0216041PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15Lalb_Chr05-View
Salix brachistaSabra01G0110400GWHAAZH00000001-View
Solanum lycopersicumSolyc08g005080.2Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA)SL4.0ch08+View
Schrenkiella parvulaSp7g16220PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASEch7-4-View
Solanum pennelliiSopen08g001100Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 20 (UBP20) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21Spenn-ch08+View
Solanum tuberosumPGSC0003DMG400017850Ubiquitin carboxyl-terminal hydrolaseST4.03ch08-View
Trochodendron aralioidesTAR375G1111group15+View
Theobroma cacaoThecc.03G227100Ubiquitin-specific protease 20Chromosome_3-View
Vaccinium macrocarponvmacro00327Similar to UBP21: Ubiquitin carboxyl-terminal hydrolase 21 (Arabidopsis thaliana OX%3D3702)chr1_Vaccinium_macrocarpon_Stevens_v1+View