Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold71G23912scaffold71-View
SGA_v2.0_scaffold68G22842scaffold68+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG8G1500LG-8-View
Aethionema arabicumAa31LG10G1430LG-10-View
Acer truncatumAtru.chr1.4117chr1+View
Actinidia chinensisActinidia31150Lachesis_group9+View
Actinidia chinensisActinidia26001Lachesis_group2+View
Actinidia chinensisActinidia24437Lachesis_group27-View
Arabidopsis lyrataAL1G62620scaffold_1+View
Arabidopsis lyrataAL3G26520scaffold_3-View
Avicennia marinaMSTRG.10918ScioBoG_14204_HRSCAF_14270+View
Avicennia marinaMSTRG.22524ScioBoG_3703_HRSCAF_3719+View
Avicennia marinaMSTRG.9538ScioBoG_12795_HRSCAF_12848-View
Amaranthus hybridusAh.15g095010Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1)AmaHy_arrow1_Scaffold_15+View
Amaranthus hybridusAh.08g217280Ethylene-responsive transcription factor RAP2-12 (Protein RELATED TO APETALA2 12)AmaHy_arrow1_Scaffold_8-View
Arabidopsis thalianaAT1G53910related to AP2 12 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. related to AP2 12 (RAP2.12)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.3)%3B Has 6179 Blast hits to 5848 proteins in 260 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 0%3B Fungi - 0%3B Plants - 6129%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink).Chr1+View
Arabidopsis thalianaAT3G14230related to AP2 2 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. related to AP2 2 (RAP2.2)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 12 (TAIR:AT1G53910.2)%3B Has 6244 Blast hits to 5852 proteins in 259 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 6195%3B Viruses - 4%3B Other Eukaryotes - 43 (source: NCBI BLink). related to AP2 2 (RAP2.2)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 12 (TAIR:AT1G53910.2)%3B Has 6242 Blast hits to 5845 proteins in 257 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 2%3B Plants - 6193%3B Viruses - 4%3B Other Eukaryotes - 41 (source: NCBI BLink).Chr3-View
Brassica carinataBcaB04g17050ChrB04-View
Brassica carinataBcaB03g14984ChrB03+View
Brassica carinataBcaC08g46692ChrC08+View
Brassica carinataBcaC05g29101ChrC05+View
Brassica napusA07p38560A07+View
Brassica napusA05p35140A05+View
Brassica napusC05p53140C05+View
Brassica napusC01p50320C01+View
Brassica napusC06p46730C06+View
Brassica oleraceaBolC1t04987HC1+View
Brassica oleraceaBolC6t39717HC6+View
Brassica oleraceaBolC6t36723HC6+View
Brassica oleraceaBolC5t33993HC5+View
Brassica rapaBraA05t22327ZA05+View
Brassica rapaBraA07t31414ZA07+View
Brassica rapaBraA01t03987ZA01+View
Beta vulgarisEL10Ac7g16479PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr7_EL10_PGA_scaffold5-View
Camellia sinensis var. sinensisCSS0041210ethylene response factor 5 [Actinidia deliciosa]Chr15+View
Capsicum annuumCAN.G790.71PGAv.1.6.scaffold790-View
Cannabis sativaCANSAT56G3798NC_044371.1-View
Cicer arietinum L.Ca_23426_v3Ca_LG7_v3-View
Coffea canephoraCc04_g00840Putative Ethylene-responsive transcription factor RAP2-12chr4+View
Citrus clementinaCiclev10025816m.gscaffold_7-View
Ceratophyllum demersumCDE05G08733-View
Ceratophyllum demersumCDE07G03765+View
Ceratophyllum demersumCDE06G17344+View
Carpinus fangianaCfa003469Cfa01+View
Cardamine hirsutaCARHR089150Ethylene-responsive transcription factor, putativeChr3-View
Cardamine hirsutaCARHR044220Ethylene-responsive transcription factor, putativeChr1+View
Carya illinoinensisCiPaw.02G132000PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr02+View
Carya illinoinensisCiPaw.01G212500PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr01+View
Citrullus lanatusClCG09G001280Ethylene-responsive transcription factor 4CG_Chr09-View
Cucumis meloMELO3C022694.2Ethylene-responsive transcription factorchr04-View
Cucumis meloMELO3C024315.2Ethylene-responsive transcription factorchr01+View
Corchorus olitoriusCOL.COLO4_30849ethylene-responsive transcription factor RAP2-12-like proteinAWUE01020791.1-View
Chenopodium quinoaAUR62001420RAP2-2: Ethylene-responsive transcription factor RAP2-2C_Quinoa_Scaffold_2716+View
Chenopodium quinoaAUR62009950RAP2-12: Ethylene-responsive transcription factor RAP2-12C_Quinoa_Scaffold_2493-View
Capsella rubellaCarub.0001s4318PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDscaffold_1+View
Cucumis sativus L.CsaV3_7G034050Ethylene-responsive transcription factorchr7+View
Cucumis sativus L.CsaV3_3G030950Ethylene-responsive transcription factorchr3-View
Daucus carotaDCAR_007656hypothetical proteinDCARv2_Chr2-View
Davidia involucrataDinv37829GWHABJS00000006-View
Davidia involucrataDinv20391GWHABJS00000019-View
Durio zibethinusDuzib160G0320NW_019168015.1-View
Durio zibethinusDuzib192G1067NW_019168037.1+View
Durio zibethinusDuzib235G1202NW_019167982.1-View
Erigeron canadensisECA232G0570Conyza_canadensis_scaffold:2-View
Erigeron canadensisECA234G3271Conyza_canadensis_scaffold:4+View
Eucalyptus grandisEucgr.I02155Chr09-View
Erythranthe guttataMigut.D00917scaffold_4+View
Erythranthe guttataMigut.I01124scaffold_9-View
Eutrema salsugineumThhalv10020945m.gPTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATEDscaffold_13+View
Eutrema salsugineumThhalv10018945m.gPTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDscaffold_9-View
Eutrema salsugineumThhalv10011606m.gscaffold_7-View
Fragaria x ananassaFAN09G3977PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDFvb6-2+View
Fragaria x ananassaFAN02G3485PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDFvb6-4-View
Fragaria x ananassaFAN05G3227PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDFvb6-3+View
Fragaria vescaFvH4_6g35670PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDFvb6-View
Gossypium hirsutumGohir.A05G141200PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDA05-View
Gossypium hirsutumGohir.D06G202200PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDD06-View
Gossypium hirsutumGohir.A10G050900PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDA10+View
Gossypium hirsutumGohir.D10G052600PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDD10+View
Gossypium hirsutumGohir.D05G143400PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDD05-View
Glycine maxGlyma.03G263700PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDGm03+View
Glycine maxGlyma.16G012600PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDGm16-View
Glycine maxGlyma.19G262700PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDGm19+View
Glycine maxGlyma.07G044300PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDGm07-View
Gossypium raimondiiGorai.009G147300Chr09-View
Gossypium raimondiiGorai.011G056300Chr11+View
Helianthus annuusHanXRQChr10g0311971Probable related to AP2 2HanXRQChr10-View
Helianthus annuusHanXRQChr09g0277201Probable integrase-type DNA-binding superfamily proteinHanXRQChr09-View
Hydrangea macrophyllaHma1.2p1_0229F.1_g097000Hma1.2p1_0229F.1-View
Lupinus albusLalb_Chr10g0101161PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDLalb_Chr10+View
Lupinus albusLalb_Chr04g0261191PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDLalb_Chr04-View
Lotus japonicusLj3g0018499PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDchr3-View
Lonicera japonicaLj9A537T42GWHAAZE00000009-View
Lonicera japonicaLj5A30T67GWHAAZE00000005+View
Lactuca sativaLsat_1_v5_gn_1_38561PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDLsat_1_v8_lg_1-View
Lactuca sativaLsat_1_v5_gn_5_136680Lsat_1_v8_lg_5-View
Lactuca sativaLsat_1_v5_gn_0_41681PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDLsat_1_v8_lg_4-View
Malus domesticaMD17G1152400related to AP2 12Chr17-View
Malus domesticaMD09G1174400related to AP2 12Chr09+View
Manihot esculentaManes.04G150100Chromosome04-View
Manihot esculentaManes.11G013700Chromosome11+View
Nicotiana tabacumNitab4.5_0000357g0080AP2/ERF domain, DNA-binding domainNitab4.5_0000357-View
Oryza sativa ssp. japonicaOs06g0194000AP2/ERF transcription factor, Drought resistance, Control of lignin biosynthesis Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3 homolog) (EREBP-5) (NtERF5).chr06+View
Prunus persicaPrupe.3G032300PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDPp03+View
Populus trichocarpaPotri.001G163700PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr01+View
Populus trichocarpaPotri.003G071700PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr03-View
Phaseolus vulgarisPhvul.010G124700PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr10+View
Phaseolus vulgarisPhvul.009G262200PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDChr09+View
Rhododendron simsiiRhsim12G0213000chr12-View
Rhododendron simsiiRhsim08G0243000chr08-View
Salvia bowleyanaSalBow7G2000GWHASIU00000005-View
Salix brachistaSabra03G0042600GWHAAZH00000003-View
Salix brachistaSabra01G0129100GWHAAZH00000001-View
Simmondsia chinensisSc15g0000770GWHAASQ00000015-View
Sechium eduleSed0014990LG06-View
Sechium eduleSed0016576LG09-View
Solanum lycopersicumSolyc06g063070.3Ethylene Response Factor A.3SL4.0ch06-View
Solanum lycopersicumSolyc12g049560.2Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2ZB67_CAPAN)SL4.0ch12-View
Schrenkiella parvulaSp3g12520PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDch3-1-View
Schrenkiella parvulaSp1g40390PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATEDch1-2+View
Solanum pennelliiSopen06g022520encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. | related to AP2 12 (RAP2.12) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: related to AP2 2Spenn-ch06-View
Solanum pennelliiSopen12g024030encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. | related to AP2 12 (RAP2.12) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: related to AP2 2Spenn-ch12-View
Solanum tuberosumPGSC0003DMG400028853Callus-expressing factorST4.03ch12-View
Solanum tuberosumPGSC0003DMG400004898Transcription factor JERF1ST4.03ch06+View
Selenicereus undatusHund18647Scaffold_33675+View
Selenicereus undatusHund05708Scaffold_19641+View
Trochodendron aralioidesTAR383G0807group10-View
Trochodendron aralioidesTAR624G1094group9+View
Theobroma cacaoThecc.06G128400Transcription factor JERF1Chromosome_6-View
Tarenaya hasslerianaTHA.LOC104810389ethylene-responsive transcription factor RAP2-12NW_010965216.1-View
Tarenaya hasslerianaTHA.LOC104812272ethylene-responsive transcription factor ERF073NW_010965372.1-View
Tripterygium wilfordiiTWI14G0568NC_052249.1+View
Tripterygium wilfordiiTWI59G1138NC_052248.1+View
Vaccinium macrocarponvmacro15075Similar to RAP2-12: Ethylene-responsive transcription factor RAP2-12 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo1309G2049CM024072.1-View
Vitis viniferaGSVIVG01016684001chr9+View
Zea maysZm00001eb374110Zm00001e036260 AP2-EREBP transcription factor AP2-EREBP-transcription factor 1609-View