Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.10G093801Chromosome10-View
Manes.12G122000Chromosome12-View
Manes.18G057830Chromosome18-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG6G14880LG-6-View
Acer truncatumAtru.chr13.954chr13-View
Actinidia chinensisActinidia16388Lachesis_group25+View
Actinidia chinensisActinidia29654Lachesis_group7-View
Arabidopsis lyrataAL7G12700scaffold_7+View
Avicennia marinaMSTRG.20258ScioBoG_26180_HRSCAF_26306-View
Amaranthus hybridusAh.03g134330AmaHy_arrow1_Scaffold_3+View
Aquilegia oxysepalaAqoxy6G00651CHR06-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.B128UNPTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1arahy.Tifrunner.gnm1.Arahy.10-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.JS19XHarahy.Tifrunner.gnm1.Arahy.08+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.7GTW3CPTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDarahy.Tifrunner.gnm1.Arahy.15+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.JI0U8KPTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDarahy.Tifrunner.gnm1.Arahy.05+View
Arabidopsis thalianaAT4G37940AGAMOUS-like 21 encodes a MADS box protein%2C highly expressed in the root. AGAMOUS-like 21 (AGL21)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C C globular stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1)%3B Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 648%3B Fungi - 305%3B Plants - 6180%3B Viruses - 2%3B Other Eukaryotes - 102 (source: NCBI BLink).Chr4-View
Amborella trichopodaATR0800G120AmTr_v1.0_scaffold00046-View
Brassica carinataBcaC01g00364ChrC01+View
Brassica carinataBcaB06g27809ChrB06+View
Brassica carinataBcaB03g12322ChrB03+View
Brassica carinataBcaC02g08629ChrC02-View
Brassica carinataBcaC07g41042ChrC07-View
Brassica napusA04p17050A04+View
Brassica napusA09p57360A09-View
Brassica napusC03p78900C03+View
Brassica napusA01p01110A01+View
Brassica napusA08p22960A08-View
Brassica napusC01p01250C01+View
Brassica oleraceaBolC8t51614HC8-View
Brassica oleraceaBolC3t20134HC3+View
Brassica oleraceaBolC1t00122HC1+View
Brassica rapaBraA01t00109ZA01+View
Brassica rapaBraA08t34258ZA08-View
Brassica rapaBraA04t17334ZA04+View
Beta vulgarisEL10Ac6g13312PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDChr6_EL10_PGA_scaffold0-View
Camellia sinensis var. sinensisCSS0042518hypothetical protein CISIN_1g047620mg [Citrus sinensis]Chr3-View
Camellia sinensis var. sinensisCSS0050311unnamed protein product [Coffea canephora]Chr9+View
Camellia sinensis var. sinensisCSS0048771PREDICTED: MADS-box transcription factor 23-like isoform X2 [Nelumbo nucifera]Chr1+View
Camellia sinensis var. sinensisCSS0039229unnamed protein product [Coffea canephora]Chr13+View
Camellia sinensis var. sinensisCSS0003338PREDICTED: MADS-box transcription factor 23-like [Vitis vinifera]Chr2+View
Capsicum annuumCAN.G1061.37PGAv.1.6.scaffold1061-View
Capsicum annuumCAN.G215.12PGAv.1.6.scaffold215-View
Cicer arietinum L.Ca_25210_v3Ca_LG8_v3-View
Cicer arietinum L.Ca_00177_v3Ca_LG1_v3+View
Cicer arietinum L.Ca_22669_v3Ca_LG7_v3+View
Corylus avellanaHaze_22494Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702)3+View
Corylus avellanaHaze_03924Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702)2+View
Coffea canephoraCc10_g08290Agamous-like MADS-box protein AGL16chr10-View
Coffea canephoraCc02_g20680Putative MADS-box transcription factor 57chr2-View
Citrus clementinaCiclev10027571m.gscaffold_7-View
Citrus clementinaCiclev10003094m.gscaffold_5-View
Cardamine hirsutaCARHR246360AGAMOUS-like MADS-box transcription factorChr7-View
Carya illinoinensisCiPaw.07G162300PTHR11945//PTHR11945:SF147 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATEDChr07-View
Carya illinoinensisCiPaw.05G027600PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1Chr05-View
Citrullus lanatusClCG11G014760MADS-box transcription factor 57CG_Chr11+View
Citrullus lanatusClCG01G018230MADS-box transcription factor 25CG_Chr01-View
Cucumis meloMELO3C003502.2MADS-box transcription factorchr04-View
Cucumis meloMELO3C007700.2MADS-box transcription factorchr08-View
Corchorus olitoriusCOL.COLO4_11687Transcription factor%2C K-boxAWUE01014732.1-View
Chenopodium quinoaAUR62030928MADS27: MADS-box transcription factor 27C_Quinoa_Scaffold_2587-View
Capsella rubellaCarub.0007s0227PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDscaffold_7+View
Cucumis sativus L.CsaV3_6G044810MADS-box transcription factorchr6-View
Cucumis sativus L.CsaV3_2G030300MADS-box protein likechr2-View
Cucumis sativus L.CsaV3_3G048150MADS-box transcription factorchr3+View
Daucus carotaDCAR_010757hypothetical proteinDCARv2_Chr3+View
Durio zibethinusDuzib041G0051NW_019167826.1-View
Durio zibethinusDuzib116G0482NW_019167949.1-View
Durio zibethinusDuzib132G0753NW_019167915.1-View
Erigeron canadensisECA246G4338Conyza_canadensis_scaffold:8-View
Eucalyptus grandisEucgr.H02430Chr08+View
Eucalyptus grandisEucgr.F02162Chr06-View
Eucalyptus grandisEucgr.F00448Chr06-View
Eucalyptus grandisEucgr.I02593Chr09-View
Erythranthe guttataMigut.N02838scaffold_14-View
Erythranthe guttataMigut.H00286scaffold_8+View
Erythranthe guttataMigut.B00527scaffold_2-View
Eutrema salsugineumThhalv10026139m.gPTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDscaffold_1+View
Fragaria x ananassaFAN19G0573PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18Fvb1-4+View
Fragaria x ananassaFAN26G2764PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18Fvb1-2+View
Fragaria x ananassaFAN27G3369PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATEDFvb2-1-View
Fragaria x ananassaFAN28G0449PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDFvb1-1+View
Fragaria x ananassaFAN23G0326PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18Fvb1-3+View
Fragaria vescaFvH4_5g34080PTHR11945//PTHR11945:SF144//PTHR11945:SF184 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED // SUBFAMILY NOT NAMEDFvb5-View
Gossypium hirsutumGohir.A11G050000PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDA11-View
Gossypium hirsutumGohir.D05G220400PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDD05-View
Gossypium hirsutumGohir.A05G217000PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDA05-View
Gossypium hirsutumGohir.D11G053400PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDD11-View
Gossypium hirsutumGohir.D12G081800PTHR11945:SF179 - MADS-BOX PROTEIN SVPD12-View
Gossypium hirsutumGohir.D06G029700PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDD06-View
Gossypium hirsutumGohir.A06G030400PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDA06-View
Glycine maxGlyma.01G020500PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm01-View
Glycine maxGlyma.13G255200PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1Gm13-View
Glycine maxGlyma.08G065300PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDGm08-View
Gossypium raimondiiGorai.013G053800Chr13-View
Gossypium raimondiiGorai.009G227400Chr09-View
Gossypium raimondiiGorai.007G058200Chr07-View
Lupinus albusLalb_Chr16g0381531PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDLalb_Chr16-View
Lotus japonicusLj6g0006000PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1chr6-View
Lotus japonicusLj4g0011636PTHR11945//PTHR11945:SF172 - MADS BOX PROTEIN // MADS-BOX TRANSCRIPTION FACTOR ANR1chr4-View
Lonicera japonicaLj2C430G5GWHAAZE00000002-View
Lonicera japonicaLj4A177T25GWHAAZE00000004-View
Lactuca sativaLsat_1_v5_gn_5_111041PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMEDLsat_1_v8_lg_5-View
Magnolia biondiiMBI16_g07267_MAGBIOAED:0.53Chr16-View
Malus domesticaMD15G1389800AGAMOUS-like 16Chr15+View
Malus domesticaMD15G1307400AGAMOUS-like 21Chr15-View
Malus domesticaMD01G1043900AGAMOUS-like 21Chr01+View
Medicago truncatulaMedtr2g009890MADS-box transcription factorchr2+View
Medicago truncatulaMedtr4g092990MADS-box transcription factorchr4-View
Medicago truncatulaMedtr5g031000MADS-box transcription factorchr5-View
Nelumbo nuciferaNn1g05657chr1+View
Nicotiana tabacumNitab4.5_0000036g0460Transcription factor, MADS-box, Transcription factor, K-boxNitab4.5_0000036-View
Olea europaeaOeu012464.1chr18-View
Punica granatumPGR031G0386NC_045127.1-View
Prunus persicaPrupe.1G538700PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATEDPp01+View
Prunus persicaPrupe.6G208900PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDPp06+View
Pisum sativumPsat1g213000MADS domain signaturechr1LG6-View
Populus trichocarpaPotri.001G284600PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDChr01+View
Populus trichocarpaPotri.007G120002PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF)Chr07-View
Phaseolus vulgarisPhvul.006G200350PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1Chr06-View
Phaseolus vulgarisPhvul.002G143866Chr02-View
Quercus lobataQL11p02607911+View
Rhododendron simsiiRhsim06G0069700chr06-View
Rhododendron simsiiRhsim08G0088000chr08+View
Rhododendron simsiiRhsim10G0080200chr10-View
Striga asiaticaSGA_v2.0_scaffold149G36511scaffold149+View
Salvia bowleyanaSalBow2G0914GWHASIU00000007+View
Salvia bowleyanaSalBow6G6238GWHASIU00000002-View
Salix brachistaSabra09G0061000GWHAAZH00000009+View
Simmondsia chinensisSc16g0000710GWHAASQ00000016+View
Sechium eduleSed0016651LG05-View
Sechium eduleSed0004053LG10-View
Solanum lycopersicumSolyc02g091550.2MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC)SL4.0ch02+View
Solanum lycopersicumSolyc01g106170.4MADS box transcription factor AGAMOUS (AHRD V3.3 *-* A0A1Q1NK16_PAELC)SL4.0ch01+View
Schrenkiella parvulaSp7g35590PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATEDch7-6-View
Solanum pennelliiSopen04g030400MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), MADS box gene, transcription factor | AGAMOUS-like 44 (AGL44) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to nutrient, lateral root development | LOCATED IN: nucleus | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21Spenn-ch04+View
Solanum pennelliiSopen02g036170MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), encodes a MADS box protein, highly expressed in the root. | AGAMOUS-like 21 (AGL21) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17Spenn-ch02+View
Solanum tuberosumPGSC0003DMG400009349Mads box proteinST4.03ch04+View
Selenicereus undatusHund14170Scaffold_33679-View
Selenicereus undatusHund16616Scaffold_33677-View
Trochodendron aralioidesTAR381G0641group11-View
Trochodendron aralioidesTAR628G0334group5+View
Theobroma cacaoThecc.01G084900Chromosome_1-View
Tarenaya hasslerianaTHA.LOC104798533MADS-box transcription factor 23-like isoform X1NW_010960188.1-View
Trifolium pratenseTPR.G37109Tp57577_TGAC_v2_LG2-View
Trifolium pratenseTPR.G9493Tp57577_TGAC_v2_LG2+View
Tripterygium wilfordiiTWI56G0284NC_052242.1-View
Vaccinium macrocarponvmacro05524Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947)chr12_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo1215G1073CM024074.1-View
Vigna mungoVMungo0647G1511CM024073.1-View
Vitis viniferaGSVIVG01009219001chr18+View
Vitis viniferaGSVIVG01003858001chrUn-View