Anchorpoints
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG10G8280 | LG-10 | + | View | |
| Actinidia chinensis | Actinidia31308 | Lachesis_group20 | + | View | |
| Arabidopsis lyrata | AL5G33990 | scaffold_5 | + | View | |
| Avicennia marina | MSTRG.19210 | ScioBoG_25048_HRSCAF_25167 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.45ESD9 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.N9AH7W | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | arahy.Tifrunner.gnm1.Arahy.02 | + | View |
| Arabidopsis thaliana | AT3G53110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)%3B FUNCTIONS IN: RNA helicase activity%2C RNA-dependent ATPase activity%2C ATP-dependent helicase activity%3B INVOLVED IN: poly(A)+ mRNA export from nucleus%2C response to cold%2C response to heat%2C response to abscisic acid stimulus%3B LOCATED IN: nuclear envelope%2C plasma membrane%2C cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1)%3B Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702%3B Bacteria - 21081%3B Metazoa - 5720%3B Fungi - 4311%3B Plants - 2419%3B Viruses - 28%3B Other Eukaryotes - 6664 (source: NCBI BLink). | Chr3 | + | View |
| Brassica carinata | BcaC02g11782 | ChrC02 | + | View | |
| Corylus avellana | Haze_19481 | Similar to RH38: DEAD-box ATP-dependent RNA helicase 38 (Arabidopsis thaliana OX%3D3702) | 10 | - | View |
| Coffea canephora | Cc06_g04810 | DEAD-box ATP-dependent RNA helicase 38 | chr6 | - | View |
| Carpinus fangiana | Cfa016484 | Cfa07 | - | View | |
| Cardamine hirsuta | CARHR162960 | ATP-dependent RNA helicase, putative | Chr5 | + | View |
| Carya illinoinensis | CiPaw.09G005400 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Chr09 | - | View |
| Citrullus lanatus | ClCG10G019620 | ATP-dependent RNA helicase | CG_Chr10 | + | View |
| Cucumis melo | MELO3C009410.2 | DEAD-box ATP-dependent RNA helicase 38 | chr04 | + | View |
| Carica papaya | Cpa.g.sc5.123 | supercontig_5 | + | View | |
| Chenopodium quinoa | AUR62040191 | RH38: DEAD-box ATP-dependent RNA helicase 38 | C_Quinoa_Scaffold_3626 | + | View |
| Capsella rubella | Carub.0005s1964 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | scaffold_5 | + | View |
| Daucus carota | DCAR_015018 | hypothetical protein | DCARv2_Chr4 | + | View |
| Davidia involucrata | Dinv37360 | GWHABJS00000021 | + | View | |
| Durio zibethinus | Duzib128G0086 | NW_019168481.1 | + | View | |
| Durio zibethinus | Duzib106G0420 | NW_019168492.1 | + | View | |
| Durio zibethinus | Duzib093G1671 | NW_019167937.1 | + | View | |
| Erigeron canadensis | ECA248G2295 | Conyza_canadensis_scaffold:9 | - | View | |
| Eucalyptus grandis | Eucgr.K02417 | Chr11 | + | View | |
| Erythranthe guttata | Migut.J00479 | scaffold_10 | - | View | |
| Eutrema salsugineum | Thhalv10010317m.g | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | scaffold_16 | - | View |
| Fragaria x ananassa | FAN02G4584 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Fvb6-4 | - | View |
| Fragaria x ananassa | FAN09G1324 | KOG0332 - ATP-dependent RNA helicase | Fvb6-2 | + | View |
| Fragaria x ananassa | FAN05G4596 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Fvb6-3 | + | View |
| Fragaria vesca | FvH4_6g17230 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Fvb6 | - | View |
| Gossypium hirsutum | Gohir.D04G106700 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | D04 | + | View |
| Gossypium hirsutum | Gohir.A04G068100 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | A04 | + | View |
| Gossypium raimondii | Gorai.009G410800 | Chr09 | + | View | |
| Lupinus albus | Lalb_Chr21g0315281 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Lalb_Chr21 | - | View |
| Lupinus albus | Lalb_Chr06g0172001 | KOG0328 - Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily | Lalb_Chr06 | - | View |
| Lotus japonicus | Lj5g0014877 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | chr5 | + | View |
| Lactuca sativa | Lsat_1_v5_gn_1_52741 | Lsat_1_v8_lg_1 | + | View | |
| Malus domestica | MD12G1102600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr12 | + | View |
| Manihot esculenta | Manes.08G015700 | Chromosome08 | + | View | |
| Manihot esculenta | Manes.09G049118 | Chromosome09 | - | View | |
| Medicago truncatula | Medtr1g061970 | DEAD-box ATP-dependent RNA helicase-like protein | chr1 | + | View |
| Olea europaea | Oeu017001.1 | chr2 | + | View | |
| Punica granatum | PGR004G0603 | NC_045131.1 | - | View | |
| Prunus persica | Prupe.7G122600 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Pp07 | + | View |
| Populus trichocarpa | Potri.006G119000 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | Chr06 | + | View |
| Quercus lobata | QL07p041361 | 7 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr3g0471311 | RcHm_v2.0_Chr3 | - | View | |
| Rhododendron simsii | Rhsim04G0138700 | chr04 | + | View | |
| Striga asiatica | SGA_v2.0_scaffold40G15446 | scaffold40 | + | View | |
| Sechium edule | Sed0011256 | LG04 | - | View | |
| Sechium edule | Sed0013470 | LG02 | + | View | |
| Schrenkiella parvula | Sp5g09210 | K18655 - ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] (DDX19, DBP5) | ch5-1 | - | View |
| Trochodendron aralioides | TAR623G1522 | group7 | + | View | |
| Theobroma cacao | Thecc.05G075900 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chromosome_5 | - | View |
| Tarenaya hassleriana | THA.LOC104805142 | DEAD-box ATP-dependent RNA helicase 38 | NW_010960187.1 | + | View |
| Tripterygium wilfordii | TWI74G0974 | NC_052234.1 | - | View | |
| Tripterygium wilfordii | TWI53G1466 | NC_052244.1 | + | View | |
| Utricularia gibba | unitig_27.g25390 | unitig_27 | - | View | |
| Vaccinium macrocarpon | vmacro07350 | Similar to RH38: DEAD-box ATP-dependent RNA helicase 38 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vaccinium macrocarpon | vmacro08806 | Similar to RH38: DEAD-box ATP-dependent RNA helicase 38 (Arabidopsis thaliana OX%3D3702) | chr6_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vitis vinifera | GSVIVG01033721001 | chr8 | + | View |