Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0045962PREDICTED: 60S ribosomal protein L10a-2 [Phoenix dactylifera]Chr13+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG1G13120LG-1+View
Acer truncatumAtru.chr3.3243chr3-View
Actinidia chinensisActinidia24216Lachesis_group24+View
Actinidia chinensisActinidia07249Lachesis_group13+View
Actinidia chinensisActinidia31272Lachesis_group20-View
Actinidia chinensisActinidia35465Lachesis_group2+View
Actinidia chinensisActinidia05432Lachesis_group5+View
Arabidopsis lyrataAL6G33460scaffold_6-View
Avicennia marinaMSTRG.17707ScioBoG_19834_HRSCAF_19925-View
Avicennia marinaMSTRG.21043ScioBoG_26769_HRSCAF_26899-View
Aquilegia oxysepalaAqoxy2G01201CHR02-View
Aquilegia oxysepalaAqoxy4G02779CHR04-View
Arabidopsis thalianaAT2G27530Ribosomal protein L1p/L10e family Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV%2C KAN1 and KAN2. PIGGYBACK1 (PGY1)%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: adaxial/abaxial pattern formation%2C post-embryonic organ development%2C translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C large ribosomal subunit%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143)%2C Ribosomal protein L1%2C 2-layer alpha/beta-sandwich (InterPro:IPR016094)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1)%3B Has 3883 Blast hits to 3882 proteins in 1276 species: Archae - 280%3B Bacteria - 1809%3B Metazoa - 457%3B Fungi - 188%3B Plants - 511%3B Viruses - 0%3B Other Eukaryotes - 638 (source: NCBI BLink).Chr2-View
Brassica carinataBcaB02g10094ChrB02-View
Brassica carinataBcaB08g36431ChrB08+View
Brassica carinataBcaC04g19573ChrC04-View
Brassica napusC09p54150C09+View
Brassica napusA04p21000A04-View
Brassica napusA10p18390A10+View
Brassica napusC04p24070C04+View
Brassica napusC04p56780C04-View
Brassica napusA07p18270A07-View
Brassica oleraceaBolC9t58286HC9+View
Brassica oleraceaBolC4t23902HC4+View
Brassica rapaBraA10t43920ZA10+View
Brassica rapaBraA07t29543ZA07-View
Beta vulgarisEL10Ac7g15821K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Chr7_EL10_PGA_scaffold5+View
Capsicum annuumCAN.G1358.11PGAv.1.6.scaffold1358-View
Cicer arietinum L.Ca_01660_v3Ca_LG1_v3-View
Corylus avellanaHaze_19609Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. indica OX%3D39946)10+View
Corylus avellanaHaze_23375Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. indica OX%3D39946)6-View
Coffea canephoraCc06_g0573060S ribosomal protein L10achr6+View
Citrus clementinaCiclev10030134m.gscaffold_8-View
Citrus clementinaCiclev10013748m.gscaffold_6-View
Cardamine hirsutaCARHR191090Ribosomal proteinChr6+View
Cardamine hirsutaCARHR120180Ribosomal proteinChr4-View
Carya illinoinensisCiPaw.13G135900PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMEDChr13-View
Carya illinoinensisCiPaw.14G100100PTHR23105//PTHR23105:SF48 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // 60S RIBOSOMAL PROTEIN L10A-1-RELATEDChr14-View
Carya illinoinensisCiPaw.09G013800PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMEDChr09+View
Citrullus lanatusClCG01G012240Ribosomal proteinCG_Chr01-View
Cucumis meloMELO3C004713.2Ribosomal proteinchr12+View
Corchorus olitoriusCOL.COLO4_19878Ribosomal protein L1AWUE01016891.1-View
Chenopodium quinoaAUR62009759RPL10A: 60S ribosomal protein L10aC_Quinoa_Scaffold_2493-View
Chenopodium quinoaAUR62036184RPL10A: 60S ribosomal protein L10aC_Quinoa_Scaffold_2528+View
Capsella rubellaCarub.0006s2018PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATEDscaffold_6-View
Capsella rubellaCarub.0004s0819K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)scaffold_4-View
Cucumis sativus L.CsaV3_1G014820Ribosomal proteinchr1+View
Cucumis sativus L.CsaV3_6G014960Ribosomal proteinchr6-View
Daucus carotaDCAR_013384hypothetical proteinDCARv2_Chr4-View
Daucus carotaDCAR_012193hypothetical proteinDCARv2_Chr3+View
Davidia involucrataDinv31685GWHABJS00000015+View
Davidia involucrataDinv29486GWHABJS00000007-View
Davidia involucrataDinv42554GWHABJS00000170-View
Durio zibethinusDuzib170G0906NW_019167871.1-View
Durio zibethinusDuzib168G0277NW_019168159.1+View
Erigeron canadensisECA248G0801Conyza_canadensis_scaffold:9+View
Eucalyptus grandisEucgr.B03850Chr02-View
Eucalyptus grandisEucgr.J00492Chr10+View
Erythranthe guttataMigut.D02448scaffold_4-View
Fragaria x ananassaFAN25G1472PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATEDFvb3-1+View
Fragaria x ananassaFAN21G3513K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb3-2+View
Fragaria x ananassaFAN16G1083K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb3-3+View
Fragaria x ananassaFAN09G2341K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb6-2-View
Fragaria x ananassaFAN14G3326PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMEDFvb6-1-View
Fragaria x ananassaFAN11G3377K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb3-4-View
Fragaria vescaFvH4_3g24900K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb3+View
Fragaria vescaFvH4_6g18680K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Fvb6+View
Gossypium hirsutumGohir.A09G095600K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)A09+View
Gossypium hirsutumGohir.D09G095300K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)D09+View
Gossypium hirsutumGohir.D05G083900K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)D05-View
Gossypium hirsutumGohir.A05G080800K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)A05-View
Glycine maxGlyma.13G316400K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Gm13-View
Glycine maxGlyma.12G184900K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Gm12+View
Glycine maxGlyma.19G194922K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Gm19+View
Gossypium raimondiiGorai.006G112000Chr06+View
Gossypium raimondiiGorai.009G085600Chr09-View
Helianthus annuusHanXRQChr01g0024071Putative ribosomal protein L1, 2-layer alpha/beta-sandwich; Ribosomal protein L1, conserved site; Ribosomal protein L1-like; Ribosomal protein L1/ribosomal biogenesis proteinHanXRQChr01-View
Hydrangea macrophyllaHma1.2p1_0084F.1_g043790Hma1.2p1_0084F.1+View
Hydrangea macrophyllaHma1.2p1_0578F.1_g182510Hma1.2p1_0578F.1+View
Lupinus albusLalb_Chr02g0154941K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Lalb_Chr02-View
Lotus japonicusLj3g0025857K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)chr3-View
Lonicera japonicaLj2A963G27GWHAAZE00000002+View
Lonicera japonicaLj1C237T1GWHAAZE00000001-View
Lactuca sativaLsat_1_v5_gn_1_59281PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATEDLsat_1_v8_lg_1-View
Lactuca sativaLsat_1_v5_gn_2_95040K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Lsat_1_v8_lg_2-View
Magnolia biondiiMBI17_g08355_MAGBIOAED:0.24Chr17-View
Malus domesticaMD03G1143900Ribosomal protein L1p/L10e familyChr03+View
Malus domesticaMD14G1022900Ribosomal protein L1p/L10e familyChr14+View
Manihot esculentaManes.04G003500Chromosome04-View
Manihot esculentaManes.11G161800Chromosome11+View
Medicago truncatulaMedtr2g086500ribosomal protein L1p/L10e family proteinchr2+View
Nicotiana tabacumNitab4.5_0000755g0150Ribosomal protein L1/ribosomal biogenesis protein, Ribosomal protein L1, 3-layer alpha/beta-sandwich, Ribosomal protein L1, 2-layer alpha/beta-sandwich, Ribosomal protein L1, Ribosomal protein L1-likeNitab4.5_0000755-View
Nicotiana tabacumNitab4.5_0001216g0090Ribosomal protein L1, conserved site, Ribosomal protein L1/ribosomal biogenesis protein, Ribosomal protein L1, 3-layer alpha/beta-sandwich, Ribosomal protein L1-like, Ribosomal protein L1, Ribosomal protein L1, 2-layer alpha/beta-sandwichNitab4.5_0001216+View
Olea europaeaOeu022435.1scaffold1997-View
Olea europaeaOeu035552.1chr11+View
Oryza sativa ssp. japonicaOs01g0860300Similar to Ribosomal protein L1.chr01+View
Petunia axillarisPeaxi162Scf00091g0061560S ribosomal protein L10a-1Peaxi162Scf00091+View
Petunia axillarisPeaxi162Scf00003g0005960S ribosomal protein L10a-1Peaxi162Scf00003-View
Punica granatumPGR119G2280NC_045132.1-View
Prunus persicaPrupe.7G110300PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATEDPp07-View
Pisum sativumPsat5g257440Ribosomal protein L1p/L10e familychr5LG3+View
Papaver somniferumPSO384G4052NC_039368.1-View
Papaver somniferumPSO384G2780NC_039368.1-View
Papaver somniferumPSO339G0994NC_039366.1+View
Papaver somniferumPSO339G3991NC_039366.1-View
Populus trichocarpaPotri.004G202766K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Chr04-View
Phaseolus vulgarisPhvul.005G123700K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)Chr05-View
Quercus lobataQL07p0390407-View
Quercus lobataQL01p0122721-View
Rosa chinensisRcHm_v2.0_Chr5g0044551RcHm_v2.0_Chr5+View
Rhododendron simsiiRhsim01G0205000chr01-View
Rhododendron simsiiRhsim03G0075300chr03-View
Rhododendron simsiiRhsim13G0111500chr13+View
Striga asiaticaSGA_v2.0_scaffold22G09865scaffold22-View
Salvia bowleyanaSalBow6G3327GWHASIU00000002-View
Salvia bowleyanaSalBow3G1311GWHASIU00000006+View
Salix brachistaSabra04G0137000GWHAAZH00000004-View
Simmondsia chinensisSc12g0004510GWHAASQ00000012+View
Sechium eduleSed0004123LG11-View
Sechium eduleSed0022483LG01-View
Solanum lycopersicumSolyc11g068420.2Ribosomal protein (AHRD V3.3 *** Q6ER67_ORYSJ)SL4.0ch11+View
Solanum lycopersicumSolyc06g074300.4Ribosomal protein (AHRD V3.3 *** V4KXL5_EUTSA)SL4.0ch06-View
Schrenkiella parvulaSp4g10330K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)ch4-6-View
Schrenkiella parvulaSp6g22810K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A)ch6-6+View
Solanum pennelliiSopen11g027130Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e familySpenn-ch11+View
Solanum pennelliiSopen06g030750Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e familySpenn-ch06-View
Solanum tuberosumPGSC0003DMG400026361Ribosomal proteinST4.03ch11+View
Solanum tuberosumPGSC0003DMG401005881Ribosomal protein L10aST4.03ch06-View
Selenicereus undatusHund18756Scaffold_33675+View
Selenicereus undatusHund20902Scaffold_33673+View
Trochodendron aralioidesTAR369G1124group18+View
Trochodendron aralioidesTAR636G2278group1+View
Trochodendron aralioidesTAR623G1663group7+View
Trochodendron aralioidesTAR633G1113group2-View
Theobroma cacaoThecc.05G088900Ribosomal proteinChromosome_5+View
Theobroma cacaoThecc.09G283800Ribosomal proteinChromosome_9-View
Tarenaya hasslerianaTHA.LOC10482642460S ribosomal protein L10a-2NW_010967707.1+View
Tarenaya hasslerianaTHA.LOC10480053060S ribosomal protein L10a-2-likeNW_010969548.1-View
Trifolium pratenseTPR.G4466Tp57577_TGAC_v2_LG7-View
Tripterygium wilfordiiTWI75G1582NC_052253.1+View
Tripterygium wilfordiiTWI79G1543NC_052238.1+View
Tripterygium wilfordiiTWI31G1268NC_052233.1-View
Vaccinium macrocarponvmacro03317Similar to RPL10AA: 60S ribosomal protein L10a-1 (Arabidopsis thaliana OX%3D3702)chr9_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1080G0696CM024079.1+View
Vanilla planifoliaHPP92_003223Ribosomal protein ***CM028150.1+View
Vitis viniferaGSVIVG01036128001chr6+View
Vitis viniferaGSVIVG01033841001chr8-View
Zea maysZm00001eb147170Zm00001e019205 Ribosomal protein3-View