Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001132PREDICTED: poly(A) polymerase PAPalpha-like isoform X2 [Nelumbo nucifera]Chr14-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr7.2051chr7+View
Actinidia chinensisActinidia21719Lachesis_group1+View
Actinidia chinensisActinidia30290Lachesis_group14+View
Arabidopsis lyrataAL4G17690scaffold_4-View
Arabidopsis lyrataAL7G18870scaffold_7-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.GIB83PPTHR10682//PTHR10682:SF24 - POLY A POLYMERASE // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.09-View
Arabidopsis thalianaAT2G25850poly(A) polymerase 2 Encodes a poly(A) polymerase. Located in the nucleus. poly(A) polymerase 2 (PAPS2)%3B CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492)%2C Nucleotidyltransferase%2C class I%2C C-terminal-like (InterPro:IPR011068)%2C Poly(A) polymerase%2C central domain (InterPro:IPR007012)%2C Nucleotidyl transferase domain (InterPro:IPR002934)%2C Poly(A) polymerase%2C RNA-binding domain (InterPro:IPR007010)%3B BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6)%3B Has 814 Blast hits to 806 proteins in 220 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 260%3B Fungi - 214%3B Plants - 191%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink).Chr2-View
Arabidopsis thalianaAT4G32850nuclear poly(a) polymerase Encodes a nuclear poly(A) polymerase. Located in the nucleus. nuclear poly(a) polymerase (nPAP)%3B CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492)%2C Poly(A) polymerase%2C central domain (InterPro:IPR007012)%2C Nucleotidyltransferase%2C class I%2C C-terminal-like (InterPro:IPR011068)%2C Nucleotidyl transferase domain (InterPro:IPR002934)%2C Poly(A) polymerase%2C RNA-binding domain (InterPro:IPR007010)%3B Has 808 Blast hits to 801 proteins in 219 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 260%3B Fungi - 212%3B Plants - 185%3B Viruses - 0%3B Other Eukaryotes - 138 (source: NCBI BLink).Chr4+View
Brassica carinataBcaC09g52082ChrC09+View
Brassica napusA01p05440A01-View
Brassica oleraceaBolC1t00597HC1-View
Brassica rapaBraA01t00517ZA01-View
Beta vulgarisEL10Ac2g03972PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEChr2_EL10_PGA_scaffold6+View
Capsicum annuumCAN.G20.13PGAv.1.6.scaffold20+View
Cicer arietinum L.Ca_15568_v3Ca_LG5_v3+View
Corylus avellanaHaze_15855Similar to PAPS4: Nuclear poly(A) polymerase 4 (Arabidopsis thaliana OX%3D3702)11-View
Coffea canephoraCc04_g02490Putative Poly(A) polymerase betachr4+View
Citrus clementinaCiclev10025039m.gscaffold_7+View
Citrus clementinaCiclev10007557m.gscaffold_1-View
Ceratophyllum demersumCDE05G00183+View
Ceratophyllum demersumCDE05G22263-View
Carpinus fangianaCfa003639Cfa01+View
Cardamine hirsutaCARHR240850Poly(A) polymeraseChr7+View
Cardamine hirsutaCARHR115380Poly(A) polymerase 2Chr4+View
Carya illinoinensisCiPaw.07G202000PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEChr07+View
Carya illinoinensisCiPaw.01G230900PTHR10682//PTHR10682:SF24 - POLY A POLYMERASE // SUBFAMILY NOT NAMEDChr01+View
Carya illinoinensisCiPaw.08G027300PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASEChr08-View
Cucumis meloMELO3C024435.2Poly(A) polymerasechr01+View
Corchorus olitoriusCOL.COLO4_21002hypothetical proteinAWUE01017546.1-View
Chenopodium quinoaAUR62040222PAPS4: Nuclear poly(A) polymerase 4C_Quinoa_Scaffold_2344+View
Chenopodium quinoaAUR62009223PAPS4: Nuclear poly(A) polymerase 4C_Quinoa_Scaffold_3674+View
Capsella rubellaCarub.0007s0764scaffold_7-View
Capsella rubellaCarub.0004s0568PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEscaffold_4-View
Cucumis sativus L.CsaV3_7G035250Nuclear poly(A) polymerasechr7+View
Daucus carotaDCAR_007587hypothetical proteinDCARv2_Chr2-View
Davidia involucrataDinv27934GWHABJS00000003+View
Davidia involucrataDinv30431GWHABJS00000019-View
Durio zibethinusDuzib168G0685NW_019168159.1-View
Durio zibethinusDuzib235G0254NW_019167982.1-View
Durio zibethinusDuzib187G1119NW_019167860.1+View
Eutrema salsugineumThhalv10024486m.gK14376 - poly(A) polymerase (PAP)scaffold_1-View
Fragaria x ananassaFAN27G1756PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEFvb2-1+View
Fragaria x ananassaFAN20G1860PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEFvb2-3-View
Fragaria x ananassaFAN15G1396PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASEFvb2-4+View
Fragaria vescaFvH4_2g35240PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASEFvb2+View
Gossypium hirsutumGohir.D06G090600PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASED06+View
Gossypium hirsutumGohir.A06G091300KOG2245 - Poly(A) polymerase and related nucleotidyltransferasesA06+View
Gossypium hirsutumGohir.D05G046800PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASED05+View
Gossypium hirsutumGohir.A05G045100PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEA05+View
Gossypium hirsutumGohir.A07G022233PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEA07+View
Gossypium hirsutumGohir.D07G024600PF04926//PF04928 - Poly(A) polymerase predicted RNA binding domain (PAP_RNA-bind) // Poly(A) polymerase central domain (PAP_central)D07+View
Glycine maxGlyma.04G086800PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEGm04-View
Glycine maxGlyma.06G088500PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEGm06-View
Glycine maxGlyma.08G200500PTHR10682//PTHR10682:SF24 - POLY A POLYMERASE // SUBFAMILY NOT NAMEDGm08+View
Gossypium raimondiiGorai.009G048100Chr09+View
Gossypium raimondiiGorai.001G025700Chr01+View
Gossypium raimondiiGorai.010G104200Chr10+View
Lupinus albusLalb_Chr08g0242901PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASELalb_Chr08+View
Lupinus albusLalb_Chr23g0269731PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASELalb_Chr23-View
Lotus japonicusLj1g0014753PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASEchr1+View
Malus domesticaMD09G1202000nuclear poly(a) polymeraseChr09+View
Malus domesticaMD08G1110400nuclear poly(a) polymeraseChr08+View
Manihot esculentaManes.11G032900Chromosome11+View
Medicago truncatulaMedtr3g110375poly(A) polymerase-like proteinchr3-View
Nicotiana tabacumNitab4.5_0000318g0150Nucleotidyl transferase domain, Poly(A) polymerase, RNA-binding domain, Nucleotidyltransferase, class I, C-terminal-like, Poly(A) polymerase, central domainNitab4.5_0000318+View
Petunia axillarisPeaxi162Scf00699g00521poly(A) polymerase 2Peaxi162Scf00699-View
Prunus persicaPrupe.3G057600Pp03+View
Prunus persicaPrupe.1G444600PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEPp01+View
Populus trichocarpaPotri.018G057200K14376 - poly(A) polymerase (PAP)Chr18-View
Populus trichocarpaPotri.006G235400PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASEChr06+View
Phaseolus vulgarisPhvul.010G144800PTHR10682//PTHR10682:SF24 - POLY A POLYMERASE // SUBFAMILY NOT NAMEDChr10+View
Phaseolus vulgarisPhvul.009G112300Chr09-View
Quercus lobataQL12p04092512+View
Rosa chinensisRcHm_v2.0_Chr6g0306691RcHm_v2.0_Chr6-View
Rhododendron simsiiRhsim11G0049600chr11+View
Salvia bowleyanaSalBow2G2248GWHASIU00000007-View
Salix brachistaSabra06G0183700GWHAAZH00000006+View
Simmondsia chinensisSc23g0005430GWHAASQ00000023-View
Sechium eduleSed0010067LG07+View
Sechium eduleSed0026372LG01+View
Solanum lycopersicumSolyc08g066200.3Nuclear poly(A) polymerase 4 (AHRD V3.3 *** A0A2G3BS01_CAPCH)SL4.0ch08+View
Schrenkiella parvulaSp7g30620PTHR10682//PTHR10682:SF22 - POLY A POLYMERASE // NUCLEAR POLY(A) POLYMERASEch7-5+View
Solanum pennelliiSopen08g019880Encodes a nuclear poly(A) polymerase. Located in the nucleus. | nuclear poly(a) polymerase (nPAP) | CONTAINS InterPro DOMAIN/s: Poly(A) polymerase , Nucleotidyltransferase, class I, C-terminal-like , Poly(A) polymerase, central domain , Nucleotidyl transferase domain , Poly(A) polymerase, RNA-binding domainSpenn-ch08+View
Selenicereus undatusHund00700Scaffold_33678-View
Selenicereus undatusHund19493Scaffold_33673+View
Trochodendron aralioidesTAR383G0944group10+View
Trochodendron aralioidesTAR626G1067group3-View
Theobroma cacaoThecc.06G100800Nucleic acid binding proteinChromosome_6-View
Theobroma cacaoThecc.09G048200Poly(A) polymerase 1Chromosome_9-View
Tarenaya hasslerianaTHA.LOC104803745nuclear poly(A) polymerase 4 isoform X1NW_010971389.1+View
Tripterygium wilfordiiTWI34G0264NC_052235.1-View
Vaccinium macrocarponvmacro00183Similar to PAPS4: Nuclear poly(A) polymerase 4 (Arabidopsis thaliana OX%3D3702)chr1_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo0331G0180CM024078.1-View
Vigna mungoVMungo1309G1610CM024072.1+View
Vitis viniferaGSVIVG01015292001chr11+View
Vitis viniferaGSVIVG01016969001chr9+View